TCONS_00039271 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039271
Unique NameTCONS_00039271
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2076

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039271 ID=TCONS_00039271|Name=TCONS_00039271|organism=Clytia hemisphaerica|type=transcript|length=2076bp
ACTCTTCTTTAAAAAGGGCTAACATAAAACCAAGCAGATATGCTTCATTA
TGAATGATATAATACTTCATTAGAGTGAACTGTAAAAAAGTAACATTGGT
GTGAAGATTGCTAGGTACCAATCTAATATGAGTAACAAAGAAGGAAATTA
CgttattttgatatgttttaaatttttttcttgaagttGATTAAATAGAA
ATGCCAAAAAGCCCAGCTACTCAAAATGTGCAAACAACAAATAATAGTAA
CAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTAGTTCTgatg
caaaaaattcaaagaagtACACTGTTTACAAGGTAGCTGTTGAGGCAAAT
GGCCGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTA
TGATAAGGTCAAAAAGGTTTATCCTGAACAGCTTCACAACTTTAAGTTGC
CAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGATTTCATTAAAATG
CGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATTACCAAA
TATATTCAACCATGCTGACGTCAGAGAATTCTTCCAATTGGATAACCCCC
GAAATTCTTCAATAAATATTGATGAAGAAGAAGATGAAGTTGCAGAAGTT
GCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATCAAAGAAAGC
GAAACCAAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAGGAAGTTTTG
GAAAGGTTTTGCTGGCAAAACacaaaactgaagaaaaattttatGCAATC
AAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGCGCGACATAT
CATGGCTGAAAGAAATgttcttttgaagaatgtgAAGCATCCTTTCCTTG
TTGGGCTGCACTACTCATTCCAAACTTCAGATAAATTGTATTTCGTTTTG
GATTATGTAAATGGTGGAGAGTTGTTCTTCCATCTTCAACGAGAAAGATA
CTTCCCAGAACATAGGGCAAGATTTTATGCAGCTGAAATAGGATCAGCAA
TTGGATATCTCCATGGACTTAAGATTATTTACAGGGACCTGAAACCAGAA
AATATTCTATTGGACTCAAAGGGTCATGTTGTATTGACAGATTTTGGACT
TTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACCTTTTGCGGGA
CACCAGAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACGACAAA
TCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATGTATGG
CTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAATATCC
TTCACAAACCTCTACGACTACGaaccaatatttcacaaagcgCAAGACAC
CTTTTAGAACAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGCTC
AGAAGCTGATTTCGACGAGATCCGATCACATCCATTCTTCCGTAGTATCA
ATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCCAAT
GTTAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATTTGTAAGGGA
GCCAGTACCTGCATCTGTGACAAAGGCCGATGGAAGTCAAGTCATTTCTG
CAAGTGTGGATGACCCTGATGAAGCATTTGTTGGATTCACTTACGTACCC
CAATCCGAAGATTTAGTCGAATAAATGCATTCACCTGTGGCTCAATGCTG
GCCACAGTATGGCGAATCATTTCTAGAAAATATAGTTGTTTACTTTCTCT
TCGCAATATTCATGTCTGGTTGATTTATAACGTCGATGGACATACCGTGA
AGCATTTATGGAGAACTGAACCAAGGTCCATTTTTTCTGTAATATTACAA
ATTTGTTAATAAAGAATGAGAGAGTGGTAaggcaaaaattttattttact
tttttttgtactttttgttttgatttagatAACTTATGAACAATTCagaa
ttataaaaaacaacCTCTAGCAACTTTTTAATAATAgagaacaaatttaa
aacagGTTGGGAAAATTATTAACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..23501-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039271 ID=TCONS_00039271|Name=TCONS_00039271|organism=Clytia hemisphaerica|type=transcript|length=13491bp|location=Sequence derived from alignment at sc0002054:10011..23501- (Clytia hemisphaerica)
ACTCTTCTTTAAAAAGGGCTAACATAAAACCAAGCAGATATGCTTCATTA TGAATGATATAATACTTCATTAGAGTGAACTGTAAAAAAGTAACATTGGT GTGAAGATTGCTAGGTACCAATCTAATATGAGTAACAAAGAAGGAAATTA CGTTATTTTGATATGTTTTAAATTTTTTTCTTGAAGTTGATTAAATAGAA ATGCCAAAAAGCCCAGCTACTCAAAATGTGCAAACAACAAATAATAGTAA CAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTAGTTCTGATG CAAAAAATTCAAAGAAGTACACTGTAAGTATAAGTATTCTAAATAATTTT CATTCAAGTTTTGCATTTTTAACACCTTTTGTCGATTTGTCAAATTATTT GCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGGTTTACAA GGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATATA ATGAGTTCCATACACTGTATGATAAGGTTAGAAATTTATGGCTTGGAAAC GTTTTGTGCTACAATTGATAATTTTTTGTATTTGCACTGTTTCTGTTTAC CTTATTCTGTGCTGCTGTGTAATCAAAAATTTTCTTCNTGCAAACAACAA ATAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTT AGTTCTGATGCAAAAAATTCAAAGAAGTACACTGTAAGTATAAGTATTCT AAATAATTTTCATTCAAGTTTTGCATTTTTAACACCTTTTGTCGATTTGT CAAATTATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTA AGGTTTACAAGGTAGCTGTTGAGNCACCTTTTGTCGATTTGTCAAATTAT TTGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGGTTTAC AAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATA TAATGAGTTCCATACACTGTATGATAAGGTTAGAAATTTATGGCTTGGAA ACGTTTTGTGCTACAATTGATAATTTTTTGTATTTGCACTGTTTCTGTTT ACCTTATTCTGTGCTGCTGTGTAATCAAAAATTTTCTTCTAGAAATTTCT TGAAAATATTTGTATTAAAAACTCATTCTGAAAAAGAAAAAGATTAAAGT GGCATTTTGTCATCTATCATAAGTGTAACTTAATTACAACTAATGTTTCC TTGATAGGAAAACCAAAACCTTTTAATTGTGACTCTGTAACTATTCTTGT AGCAAAAAAATGCTCAAACAATATGTATGCAAATCCTGTGTTAATGCATC TTTTGCTTTTTTAGCTGACAACTTTTTGACATGTTTATTTACATATGAAT CATTCATTTTTTCAATATAGGTCAAAAAGGTTTATCCTGAACAGCTTCAC AACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGG TAAAAATTTTATACGCCCTCTATCAAATTATCCCTCAAAATTTTAAATTC AAAAACTGAAATGAAAATTTAAAAGATTAAAGAGGTATTTCATTTCACTG GAGTTTGTTTACGTGAATAAAAAACAAAGAGATTGATTTTATCAACTTTG TTTAGATAAGCTTAATTTGATTTGCTCTGTTTTGATGATAAATCTTATAA ACACCTTTGTGTTATAATCTTTGTAGAACTTTGCAGAAGAATTTACATCA TTTTTTGTTGCATTTTCTCATGTTCTTGTAATAAAGATATTTTTGTTGTT TTCAATAAAAGAAACTAAAAGTTGCCATCTGGTGTATCAAAAAGTAATAA ATAATGAAAGACTTTCATAAAAAGAGAAACAAGTTTGATATATAAAAGTG AAATGTACTTGCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTATATTTGAA AAGCAATATCAGCCTGCCTCTTCATATTTACATCAAAAAAATATCATACA AGTAAAAGATGTATCCTTATTTCTGTTCCCATACTTTGATTTGAAATTAA ATCGTCTCCTACCTCTATTACTCTGCCATCACCATTGGCGTCCTTGTCTC CTTGTGTTCTCGTCATACAAGTCAATTCATCTAAGTGAATGAAAATAAGC ACATATCTATCCTTCCTTGCTGTGAAGAAAGTGCTTGACAAATAATTCAG TCATGGTTCTAATGCTTTTATCACTCCGTTCTTACAGATTTCATTAAAAT GCGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATTACCAA ATATATTCAACCAGTAAGTAATGATGAGAGTTGCTTGATTTTTCATGTTT TTCTACAACTCCTTATAAAATAAGATTAATACTATCAAAATTATTTTTTT GTCAAACTAATTTAAATGTGAGATGGTTTTCTTATGTTAATGCTCTCTTC CCATAGCGTCAGCCCCCCCTGGAAACTGGGGAAGGAAATCACTCTAAAAT ATTCCCGAAAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCAT GAAGCTGAAAAATTTTGTCTGCGGGGNAAATCACTCTAAAATATTCCCGA AAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCATGAAGCTGA AAAATTTTGTCTGCGGGGGAATATTTTAATATGAAATATTCAAAATATGT AAAATATACTATCTTCTATCTTTTAATATTTTACTTGGCTCTGCAACATC GATCACAGACACAGACAAAACTATCTTCTACTTTTTTTTCCTGGGANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGAAATATACTATCTTC TATCTTTTAATATTTTACTTGGCTCTGCAACATCGATCACAGACACAGAC AAAACTATCTTCTACTTTTTTTTCCTGGGACAAATTTTAGAAAGTGTAGA TGGTGGCAAATCTTGAGAGCTATAAACAAATTTTTAAATTATTGGGGGAC TTAACTTTTTGTCTGGGACCTAAACACTGGCTGAGGATATGGCTCTTCCA CGTTATAGGTGAAAAATACCAAAAATTAAAGAATTTGTTAGAAAGTTGTT CTCAATCAGGTTTCAATCAAAATAAGAGTTCTATCTTTCAAAAGGTTAAC CTTCCAGTGCATTCTTAAAAAAAACAGTTTAATGACCTGCTTCATTTTCA TAGTGCTGACGTCAGAGAATTCTTCCAATTGGATAACCCCCGAAATTCTT CAATAAATATTGATGAAGAAGAAGATGAAGTTGCAGAAGTTGTAAGAATC CATTTTTGTTCGCATTGTATGATGTCGGTTATGCCAAATTATACAAACCA CCAAAGAAATTCTGAAATTCTGAAAAAAGAGCCATTTAAAAAAAGTTGGA AATGGCAGCAGTGTACAAGATACAAACTTTCCCTTTTTTGATAAAATCTA GTTTCACCAGCCATTAATATTTTGTATTACTTTATACCCTCAAGAAAGCT TTTTTATAAAACTAAAAGCTAAAAGCTTTTTAAATTTGTTTTGGGAAATA GGCTCTCAAGAACTAAAGCATAATTTGAAAAAATATATAAAATCCCAGCA TGTTGTACTTTCTTTCTATTGATAAACCTGTGTTGTCTTGATCTGAAAAT CTATTCAAAATAAAACTTTTCTTTTTCAAAATGTTAGAGACTTTACTAAT GAAAACTTTTTCTTCAAATATGGCTTATTTTCAGGTACTTATAATAAATT TTTTTAATTTTCTTAAATCTAAAATCAAACACTGTATTTGTGTGGTCTGA GACTCGTTTTTGATACCTTCTTATCTTTCTAAGGCATCAGAGTTGGAAAA TGTTGACCTTGGGCAATCTGAATCAAAGAAGTAAGTTTATTAAAGTCCAT TTAAAGGAAATTATTCCAAAAACGAACTTTCATATTTGCCTCTCTTGAGT TTGCATGGATTTATCTTTCAGAAACTAATTTCGTTTTCAGTGAGCCTACC TTTGCTTTTATCCAATTTTAAGGTGTTTGTAATTGAGTTTTTCAATTGAT TTGTGAAATATCTGTCATCTTACTCGTTAATTTCACTGATAATGATGAAA TATTCATCTTACAACTTCAGAGCGAAACCAAGTGATTTTGCATTCTTAAA AGTGATTGGTAAAGGAAGTTTTGGAAAGGTAATAACTCTGAACAGTAACA TTTTTTCTTTGGAAAATATAAGATATCCTTGGGTTTTGATTTACCAAAAT GTCTAAATTTATGTCCCCTTTGATTTAGTTTTCAATCATTCCCCTCGCTT TGATTTAGTGTTGTTGGAAATGATGAGTGTTTAATTGATAAAAGTACAAT GATCAATGTTTGGAAGAAATCTAAACCATAAAGTTTCAGCAAGTTTAACT TTTTTGATTTAGGTTTTGCTGGCAAAACACAAAACTGAAGAAAAATTTTA TGCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGTAT GATACTTACCTCATTGTTTTTTCAGTTTTTTTTTAAATTGGAACAAGATC ATTGCATTTGCAAAGACATAATGTAAAATAAAGTAATATTTTGAATTCGA TGGATACTTTTTACAGGCGCGACATATCATGGCTGAAAGAAATGTTCTTT TGAAGAATGTGAAGCATCCTTTCCTTGTTGTAAGTATTTCATGCAAAATT AACGATTGAGGATTCATTTTCATCTCCAATTCAATACCGATGCATAGAAT ATTTTATTCAAGAAAACCTTCGATAATGCAATGAAATGTGATTTGATGAT GTGATTTTTCCTCATNAACCTTCGATAATGCAATGAAATGTGATTTGATG ATGTGATTTTTCCTCATCTTCTTTATAGGGGCTGCACTACTCATTCCAAA CTTCAGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAGGTA AAATCTTACAACTCTTAACCAATTTTTTGATAAATTGACTTCAAAGAAGT TTTGCTACTGAGGAGCCTTAGGGAGTTTTTATCATTTACAGGAGGAGATA ACGAAGCCTCAAGGTCAGCTGGTCAAATTAAAATCAAAGTGCATGAAGTA TAAGGAAAACTGTCTCAGCTATGTACTTTATACCAGAAGAAGTCCCAAGA AATACAGGGGCGATAAGGCTATTAGAAATTCAAGGACTAGTAAGCGACGT GTTGAACGTGTTGCGTTTTCTTTCAATCTGATTTACATTCTCATTTTTCT TATCCTTTTTTTCAGTTGTTCTTCCATCTTCAACGAGAAAGATACTTCCC AGAACATAGGTTTGTAAATTTATTTGTTAAATAAGATAAAAAGGGTTTGT AGGGTAATCAGTGCTCGTTTTTGAATTGGTTTTATATTTTTTGTGTTAAG TACTTAGCACCTAGTTTTTGCTTAAAGTACCTTAAAGTGGGTAAAATTCC TTCCTGGATTACTCATATTTTTAAGCCTACGACTTCCTGGTTTGAAAAAG GTTGTTTTTATATCACTATTCATTGAATTTATAGGGCAAGATTTTATGCA GCTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGATTATTTA CAGGTATAATTCATTATATTTTATTACAGAGTAATGAATCCTTTGCAAAA TGAAACGAAACTGAAAGCACTATTTTTCTCCTATAAACATCTGTTCAGAT AATTTTGTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAACCTTCG TAATTTATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAG GTAAATTATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCATGATG TCTTTCCCATGAAATAACAATGGAGATTTTTAAGGTCTCCTTTGATAAAT TTCTGGCTTACAAGCTTTCCTTTATTTTTCATACCAAATGGTTCGAATCT GATATTTTTTTTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTATTGAC AGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAA CCTTTTGCGGGACACCAGAGGTACTTAAGATCATTTGAGGTTTTCCTTTG AGCTGAATGGAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTAATTTG AATCATTAGCTTAAAATTATTTTTCGAGAAATTTAACTTGAATCATTTTG AGGCTTTATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCACATCT TTTCTCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACG ACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATG TATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAA TATCCTTCACAAACCTCTACGACTACGAACCAATATTTCACAAAGCGCAA GACACCTTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTTTGTTT TGACTTTGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATGTTTTT AATACAATTTTCTAGGAAATATTTTTTTCTTATTTATTTACATTATCTTT ATCTTTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGC TCAGAAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTTTGTCT CAAATTAATTAGTTAATTTTTTTATTGGATAATCTAGAATATTTTCGAAT TCGGTTTTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGTTAAGG TTTACTAATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATCCGATC ACATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAA TCGAGCCCACCTATAACCCCAATGTTGTAGGTTCACCATTAAATTTCTGT ATCATTCATCATTCATTTATATTCATAATATTTCGCTCGGAAATTCATTC AGTATTTGAAACGTTATGTTAACTTTCTGACTTGGTTCCTACAACCCTAT GGTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATGGGATAAATTTAC GTGGTGATTTGATTNGTTCAGATAATTTTGTATCTTGTAGAAATATAAAT CCTTTAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGAAACCAG AAAATATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGATTGCTTT TCAATTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAATGGAGAT TTAAGGTTTCCTTTGATAAATTTCTGGCTTACAAAGCTTTCCTTTATTTT TCATACCAAATGGTTCGAATCTGATATTCTTATTTTTTTTCATGTTTTAT TTTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATT GAAAATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGGTACTTAA GATCAATCGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAAACTTAAAAC AATTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATTTTTAGA GAAATTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAGATTGAA GTTTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGCCCCAGA AGTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGG GAGCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGA GACACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACG AACCAATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTATCATTTT CATAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTCAAAAT GATATTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATGTTTTTT TCTTATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCCAAAAAG AAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTATTTGC TTTTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTTTTGTTG GATAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAGAAAACT TTATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTATGTTTG TTATTGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTATCAATTT CCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCTAATGTCG TAAGTTCACCATTAAATTTCTGTATCATTCATCATTCATTTATATTCATA ATATTTCGTTCGGAAATTCATTCAGTATTTGAAACGTTTGAAACGTTCTG TTAACTTTGTGACTTGGTTCCTACAACCCTATGGTTTTTCGGTGTGACTG TTTATTTGTTTACTTCAATGGGATAAATTTACGTGGTGGTTTGATTTCGC GAATCGGGGTAGAAATAGAAATTATAGAATATAAAATCTTCCCATGAAAA TGAACGAAACTTTCTTTTAAATCGAATTATTATAGTACAGCACCTGACCC CGAGAATGTAGGTGAAATTTGAATCAGACCTGAAAGATGTAGATTTGCAT TTTAAAAGATATTAAATATTTTCAACGAAATTTTGAACTCCCAAAATCCT TATTATTGTTCTCTAAGCTAAATTCATACTTTAGAAATATACGCTGACAA AAAATTAACAAATATATTAATTTCATCGTACTACAAATGAGGAAAAGTAA AAGAAGGACGAAAAGAAGGGACAAGAAAGTTGTTTTTATTTTGTAGGTTG AAAATTTTGTGTTGAAATATGTGAATAATGTAACAACACCCCTGCCTCAC AGCCCCGGTGGAACTTTTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNAAAGGCCCCCAAATTGTAGGTCAACTAACC CCAAAAGTTAGGTCAAACATTTTCGTCAAAATATCTAACTCAGAACAGTA AATATTGAAATGGACTATTTTCACCATTTCCTTAGTTCATTAGGACTAAG AAAATACCCTATCATCATAACTTAATTCCAATGATTTCGATTTAGAGAGG ATTTATTTAAAAAATGTCTCAGTTCGGGTAATATCCAATCAACTTCCATT CAGATTTTCGTTGGAAAAAATTAATTCAAGTTAAAATTTTCTGTCCAGAA ATAATCAATAAGATGTAACAGTATGCTCTGAAACAAATTTTTATGAAGTT GAACTATCGTTAGGGCTACAATGCTAAAAAATGAGAAACCTACATTCTCG GGGTTTACTACATTCTCGGGGTCAGGTGCTGTAACCTTTTTTGGAATATA GCGAGTGTGGCGTGTCCTCGCGGAGAAAACGATGAAGGTCATCATCATCA TCATTGCTCGACCGCAGTCGAGACTAGACGCTGAAGATAGAAATTTCGAG AAATCCCTGGAATTTAATCCTGGTGAAAATTTATCCCATTAAAGTATTTT TCAGCTATTTTAAGCTTCTTTTTCCAAATTCTCATCATGAAACCTTTCAA TGTATTTTCAGAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATTT GTAAGGGAGCCAGTACCTGGTAAGTTGGCGATCAAAAAACGTTCTAAAAT ACTATTTGCTTTGGCGATCTCTTTTTATTCGGAAGCCAGTTTTGAATTCG TCATAAAAAAATTAAATTAGAATCGTCTGGTATGTCAAAGAGAGAACGAT TATTGGTATTCATTGCAGTAATTAAATGGAAACCGCATTTTTTATTTGTT TGTTTACGTTGCGAGTGATGAGGTAACATCCGCTACGCGCAATGCGGCTT TCTCCTCTCTCATTCGGTCAGAAAATAATGAGAAGTTACGTTTTCAAAAT TTTCTATGCGCTTCTATTAGAAAGTATATAAACAGCCCGTTTTTTTAACA CGATAACATGCTTTATTATCTTTCTTCTCTAAAAAATACTTCGACCTAAC GATACCCTAACAAATTTGATACTTCGATCATTGAAACCGCAAATCAGAAC TTTAAAGAGTCGAGGTTCTCCTGTTTTTTTTTGTATTATCCAAATTACAA AAATTCTTCAATTTTCCCTCTCGTAGCATCTGTGACAAAGGCCGATGGAA GTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATTTGTTGGA TTCACTTACGTACCCCAATCCGAAGATTTAGTCGAATAAATGCATTCACC TGTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAAAATATAG TTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTATAACGTCG ATGGACATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTCCATTTTT TCTGTAATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGTAAGGCAA AAATTTTATTTTACTTTTTTTTGTACTTTTTGTTTTGATTTAGATAACTT ATGAACAATTCAGAATTATAAAAAACAACCTCTAGCAACTTTTTAATAAT AGAGAACAAATTTAAAACAGGTTGGGAAAATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039271-exon-sc0002054-1575043694:23179..23501TCONS_00039271-exon-sc0002054-1575043694:23179..23501Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:22474..22557TCONS_00039271-exon-sc0002054-1575043694:22474..22557Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:22003..22081TCONS_00039271-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:19289..19364TCONS_00039271-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:18311..18398TCONS_00039271-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:17722..17768TCONS_00039271-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:17424..17481TCONS_00039271-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:17106..17189TCONS_00039271-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:16923..16985TCONS_00039271-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:16655..16723TCONS_00039271-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:16293..16336TCONS_00039271-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:15999..16067TCONS_00039271-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:15802..15838TCONS_00039271-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:15532..15618TCONS_00039271-exon-sc0002054-1575043694:15532..15618Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:15135..15338TCONS_00039271-exon-sc0002054-1575043694:15135..15338Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:14937..14987TCONS_00039271-exon-sc0002054-1575043694:14937..14987Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:14676..14765TCONS_00039271-exon-sc0002054-1575043694:14676..14765Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:10983..11040TCONS_00039271-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1575043694:10011..10475TCONS_00039271-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:23179..23501TCONS_00039271-exon-sc0002054-1510915933:23179..23501Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:22474..22557TCONS_00039271-exon-sc0002054-1510915933:22474..22557Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:22003..22081TCONS_00039271-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:19289..19364TCONS_00039271-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:18311..18398TCONS_00039271-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:17722..17768TCONS_00039271-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:17424..17481TCONS_00039271-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:17106..17189TCONS_00039271-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:16923..16985TCONS_00039271-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:16655..16723TCONS_00039271-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:16293..16336TCONS_00039271-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:15999..16067TCONS_00039271-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:15802..15838TCONS_00039271-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:15532..15618TCONS_00039271-exon-sc0002054-1510915933:15532..15618Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:15135..15338TCONS_00039271-exon-sc0002054-1510915933:15135..15338Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:14937..14987TCONS_00039271-exon-sc0002054-1510915933:14937..14987Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:14676..14765TCONS_00039271-exon-sc0002054-1510915933:14676..14765Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:10983..11040TCONS_00039271-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1510915933:10011..10475TCONS_00039271-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:23179..23501TCONS_00039271-exon-sc0002054-1491911889:23179..23501Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:22474..22557TCONS_00039271-exon-sc0002054-1491911889:22474..22557Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:22003..22081TCONS_00039271-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:19289..19364TCONS_00039271-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:18311..18398TCONS_00039271-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:17722..17768TCONS_00039271-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:17424..17481TCONS_00039271-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:17106..17189TCONS_00039271-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:16923..16985TCONS_00039271-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:16655..16723TCONS_00039271-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:16293..16336TCONS_00039271-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:15999..16067TCONS_00039271-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:15802..15838TCONS_00039271-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:15532..15618TCONS_00039271-exon-sc0002054-1491911889:15532..15618Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:15135..15338TCONS_00039271-exon-sc0002054-1491911889:15135..15338Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:14937..14987TCONS_00039271-exon-sc0002054-1491911889:14937..14987Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:14676..14765TCONS_00039271-exon-sc0002054-1491911889:14676..14765Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:10983..11040TCONS_00039271-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039271-exon-sc0002054-1491911889:10011..10475TCONS_00039271-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..23501 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.72623 2.20216 2.7477 1.91142 27.0499 16.8213 21.5735 30.7818 2.86513 3.11563 0 2.40277 1.90718 1.87057 0.59723 0.557389 0.942107 0.999454 0 0 0.202194 0.00379164 1.89979 0.842108 10.0882 14.0755 1.97732 0.268735 0.868033 2.80115
Blast
BLAST of TCONS_00039271 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 3
Query:  267 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1715
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494          
The following BLAST results are available for this feature:
BLAST of TCONS_00039271 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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