TCONS_00039270 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039270
Unique NameTCONS_00039270
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2002

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039270 ID=TCONS_00039270|Name=TCONS_00039270|organism=Clytia hemisphaerica|type=transcript|length=2002bp
GTGAACTGTAAAAAAGTAACATTGGTGTGAAGATTGCTAGGTACCAATCT
AATATGAGTAACAAAGAAGGAAATTACgttattttgatatgttttaaatt
tttttcttgaagttGATTAAATAGAAATGCCAAAAAGCCCAGCTACTCAA
AATGTGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCC
TGACTCACAGACACTTAGTTCTgatgcaaaaaattcaaagaagtACACTG
TTTACAAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGA
AGATATAATGAGTTCCATACACTGTATGATAAGGTCAAAAAGGTTTATCC
TGAACAGCTTCACAACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACA
ATTTTGACCCAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGATTTT
GTAAGGAAAATATTAGGATTACCAAATATATTCAACCATGCTGACGTCAG
AGAATTCTTCCAATTGGATAACCCCCGAAATTCTTCAATAAATATTGATG
AAGAAGAAGATGAAGTTGCAGAAGTTGCATCAGAGTTGGAAAATGTTGAC
CTTGGGCAATCTGAATCAAAGAAAGCGAAACCAAGTGATTTTGCATTCTT
AAAAGTGATTGGTAAAGGAAGTTTTGGAAAGGTTTTGCTGGCAAAACaca
aaactgaagaaaaattttatGCAATCAAAGTCCTGCACAAAGCAGCTATT
CGTAAAAGAAATGAGGCGCGACATATCATGGCTGAAAGAAATgttctttt
gaagaatgtgAAGCATCCTTTCCTTGTTGGGCTGCACTACTCATTCCAAA
CTTCAGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAGTTG
TTCTTCCATCTTCAACGAGAAAGATACTTCCCAGAACATAGGGCAAGATT
TTATGCAGCTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGA
TTATTTACAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGGGT
CATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAA
AGGAACAACATCAACCTTTTGCGGGACACCAGAGTATTTGGCCCCAGAAG
TGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGGA
GCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAGA
CACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACGaa
ccaatatttcacaaagcgCAAGACACCTTTTAGAACAGCTCCTCCAAAAA
GAAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGACGAGATCCG
ATCACATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGA
AAATCGAGCCCACCTATAACCCTAATGTCAGTGGTCAATTAGATTTGAAG
CATTTCGATCCAGAATTTGTAAGGGAGCCAGTACCTGCATCTGTGACAAA
GGCCGATGGAAGTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAAG
CATTTGTTGGATTCACTTACGTACCCCAATCCGAAGATTTAGTCGAATAA
ATGCATTCACCTGTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTCT
AGAAAATATAGTTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGAT
TTATAACGTCGATGGACATACCGTGAAGCATTTATGGAGAACTGAACCAA
GGTCCATTTTTTCTGTAATATTACAAATTTGTTAATAAAGAATGAGAGAG
TGGTAaggcaaaaattttattttacttttttttgtactttttgttttgat
ttagatAACTTATGAACAATTCagaattataaaaaacaacCTCTAGCAAC
TTTTTAATAATAgagaacaaatttaaaacagGTTGGGAAAATTATTAACT
GC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..23427-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039270 ID=TCONS_00039270|Name=TCONS_00039270|organism=Clytia hemisphaerica|type=transcript|length=13417bp|location=Sequence derived from alignment at sc0002054:10011..23427- (Clytia hemisphaerica)
GTGAACTGTAAAAAAGTAACATTGGTGTGAAGATTGCTAGGTACCAATCT
AATATGAGTAACAAAGAAGGAAATTACGTTATTTTGATATGTTTTAAATT
TTTTTCTTGAAGTTGATTAAATAGAAATGCCAAAAAGCCCAGCTACTCAA
AATGTGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCC
TGACTCACAGACACTTAGTTCTGATGCAAAAAATTCAAAGAAGTACACTG
TAAGTATAAGTATTCTAAATAATTTTCATTCAAGTTTTGCATTTTTAACA
CCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTATATTGA
ATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGGCAAATGGCCG
AAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTATGATA
AGGTTAGAAATTTATGGCTTGGAAACGTTTTGTGCTACAATTGATAATTT
TTTGTATTTGCACTGTTTCTGTTTACCTTATTCTGTGCTGCTGTGTAATC
AAAAATTTTCTTCNTGCAAACAACAAATAATAGTAACAAAGATCTAGGGA
TTAGTGTTCCTGACTCACAGACACTTAGTTCTGATGCAAAAAATTCAAAG
AAGTACACTGTAAGTATAAGTATTCTAAATAATTTTCATTCAAGTTTTGC
ATTTTTAACACCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTA
TTTATATTGAATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGN
CACCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTATATT
GAATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGGCAAATGGC
CGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTATGA
TAAGGTTAGAAATTTATGGCTTGGAAACGTTTTGTGCTACAATTGATAAT
TTTTTGTATTTGCACTGTTTCTGTTTACCTTATTCTGTGCTGCTGTGTAA
TCAAAAATTTTCTTCTAGAAATTTCTTGAAAATATTTGTATTAAAAACTC
ATTCTGAAAAAGAAAAAGATTAAAGTGGCATTTTGTCATCTATCATAAGT
GTAACTTAATTACAACTAATGTTTCCTTGATAGGAAAACCAAAACCTTTT
AATTGTGACTCTGTAACTATTCTTGTAGCAAAAAAATGCTCAAACAATAT
GTATGCAAATCCTGTGTTAATGCATCTTTTGCTTTTTTAGCTGACAACTT
TTTGACATGTTTATTTACATATGAATCATTCATTTTTTCAATATAGGTCA
AAAAGGTTTATCCTGAACAGCTTCACAACTTTAAGTTGCCAGGCAAGAAA
TTGTTTGGGAACAATTTTGACCCAGGTAAAAATTTTATACGCCCTCTATC
AAATTATCCCTCAAAATTTTAAATTCAAAAACTGAAATGAAAATTTAAAA
GATTAAAGAGGTATTTCATTTCACTGGAGTTTGTTTACGTGAATAAAAAA
CAAAGAGATTGATTTTATCAACTTTGTTTAGATAAGCTTAATTTGATTTG
CTCTGTTTTGATGATAAATCTTATAAACACCTTTGTGTTATAATCTTTGT
AGAACTTTGCAGAAGAATTTACATCATTTTTTGTTGCATTTTCTCATGTT
CTTGTAATAAAGATATTTTTGTTGTTTTCAATAAAAGAAACTAAAAGTTG
CCATCTGGTGTATCAAAAAGTAATAAATAATGAAAGACTTTCATAAAAAG
AGAAACAAGTTTGATATATAAAAGTGAAATGTACTTGCTTTTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAACTATATTTGAAAAGCAATATCAGCCTGCCTCTTCA
TATTTACATCAAAAAAATATCATACAAGTAAAAGATGTATCCTTATTTCT
GTTCCCATACTTTGATTTGAAATTAAATCGTCTCCTACCTCTATTACTCT
GCCATCACCATTGGCGTCCTTGTCTCCTTGTGTTCTCGTCATACAAGTCA
ATTCATCTAAGTGAATGAAAATAAGCACATATCTATCCTTCCTTGCTGTG
AAGAAAGTGCTTGACAAATAATTCAGTCATGGTTCTAATGCTTTTATCAC
TCCGTTCTTACAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGATTT
TGTAAGGAAAATATTAGGATTACCAAATATATTCAACCAGTAAGTAATGA
TGAGAGTTGCTTGATTTTTCATGTTTTTCTACAACTCCTTATAAAATAAG
ATTAATACTATCAAAATTATTTTTTTGTCAAACTAATTTAAATGTGAGAT
GGTTTTCTTATGTTAATGCTCTCTTCCCATAGCGTCAGCCCCCCCTGGAA
ACTGGGGAAGGAAATCACTCTAAAATATTCCCGAAAAACTTAATGGTTGG
CTTCAATTACTTAATTTAAAGTTCATGAAGCTGAAAAATTTTGTCTGCGG
GGNAAATCACTCTAAAATATTCCCGAAAAACTTAATGGTTGGCTTCAATT
ACTTAATTTAAAGTTCATGAAGCTGAAAAATTTTGTCTGCGGGGGAATAT
TTTAATATGAAATATTCAAAATATGTAAAATATACTATCTTCTATCTTTT
AATATTTTACTTGGCTCTGCAACATCGATCACAGACACAGACAAAACTAT
CTTCTACTTTTTTTTCCTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATATGAAATATACTATCTTCTATCTTTTAATATTTTACTTGGCT
CTGCAACATCGATCACAGACACAGACAAAACTATCTTCTACTTTTTTTTC
CTGGGACAAATTTTAGAAAGTGTAGATGGTGGCAAATCTTGAGAGCTATA
AACAAATTTTTAAATTATTGGGGGACTTAACTTTTTGTCTGGGACCTAAA
CACTGGCTGAGGATATGGCTCTTCCACGTTATAGGTGAAAAATACCAAAA
ATTAAAGAATTTGTTAGAAAGTTGTTCTCAATCAGGTTTCAATCAAAATA
AGAGTTCTATCTTTCAAAAGGTTAACCTTCCAGTGCATTCTTAAAAAAAA
CAGTTTAATGACCTGCTTCATTTTCATAGTGCTGACGTCAGAGAATTCTT
CCAATTGGATAACCCCCGAAATTCTTCAATAAATATTGATGAAGAAGAAG
ATGAAGTTGCAGAAGTTGTAAGAATCCATTTTTGTTCGCATTGTATGATG
TCGGTTATGCCAAATTATACAAACCACCAAAGAAATTCTGAAATTCTGAA
AAAAGAGCCATTTAAAAAAAGTTGGAAATGGCAGCAGTGTACAAGATACA
AACTTTCCCTTTTTTGATAAAATCTAGTTTCACCAGCCATTAATATTTTG
TATTACTTTATACCCTCAAGAAAGCTTTTTTATAAAACTAAAAGCTAAAA
GCTTTTTAAATTTGTTTTGGGAAATAGGCTCTCAAGAACTAAAGCATAAT
TTGAAAAAATATATAAAATCCCAGCATGTTGTACTTTCTTTCTATTGATA
AACCTGTGTTGTCTTGATCTGAAAATCTATTCAAAATAAAACTTTTCTTT
TTCAAAATGTTAGAGACTTTACTAATGAAAACTTTTTCTTCAAATATGGC
TTATTTTCAGGTACTTATAATAAATTTTTTTAATTTTCTTAAATCTAAAA
TCAAACACTGTATTTGTGTGGTCTGAGACTCGTTTTTGATACCTTCTTAT
CTTTCTAAGGCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATC
AAAGAAGTAAGTTTATTAAAGTCCATTTAAAGGAAATTATTCCAAAAACG
AACTTTCATATTTGCCTCTCTTGAGTTTGCATGGATTTATCTTTCAGAAA
CTAATTTCGTTTTCAGTGAGCCTACCTTTGCTTTTATCCAATTTTAAGGT
GTTTGTAATTGAGTTTTTCAATTGATTTGTGAAATATCTGTCATCTTACT
CGTTAATTTCACTGATAATGATGAAATATTCATCTTACAACTTCAGAGCG
AAACCAAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAGGAAGTTTTGG
AAAGGTAATAACTCTGAACAGTAACATTTTTTCTTTGGAAAATATAAGAT
ATCCTTGGGTTTTGATTTACCAAAATGTCTAAATTTATGTCCCCTTTGAT
TTAGTTTTCAATCATTCCCCTCGCTTTGATTTAGTGTTGTTGGAAATGAT
GAGTGTTTAATTGATAAAAGTACAATGATCAATGTTTGGAAGAAATCTAA
ACCATAAAGTTTCAGCAAGTTTAACTTTTTTGATTTAGGTTTTGCTGGCA
AAACACAAAACTGAAGAAAAATTTTATGCAATCAAAGTCCTGCACAAAGC
AGCTATTCGTAAAAGAAATGAGGTATGATACTTACCTCATTGTTTTTTCA
GTTTTTTTTTAAATTGGAACAAGATCATTGCATTTGCAAAGACATAATGT
AAAATAAAGTAATATTTTGAATTCGATGGATACTTTTTACAGGCGCGACA
TATCATGGCTGAAAGAAATGTTCTTTTGAAGAATGTGAAGCATCCTTTCC
TTGTTGTAAGTATTTCATGCAAAATTAACGATTGAGGATTCATTTTCATC
TCCAATTCAATACCGATGCATAGAATATTTTATTCAAGAAAACCTTCGAT
AATGCAATGAAATGTGATTTGATGATGTGATTTTTCCTCATNAACCTTCG
ATAATGCAATGAAATGTGATTTGATGATGTGATTTTTCCTCATCTTCTTT
ATAGGGGCTGCACTACTCATTCCAAACTTCAGATAAATTGTATTTCGTTT
TGGATTATGTAAATGGTGGAGAGGTAAAATCTTACAACTCTTAACCAATT
TTTTGATAAATTGACTTCAAAGAAGTTTTGCTACTGAGGAGCCTTAGGGA
GTTTTTATCATTTACAGGAGGAGATAACGAAGCCTCAAGGTCAGCTGGTC
AAATTAAAATCAAAGTGCATGAAGTATAAGGAAAACTGTCTCAGCTATGT
ACTTTATACCAGAAGAAGTCCCAAGAAATACAGGGGCGATAAGGCTATTA
GAAATTCAAGGACTAGTAAGCGACGTGTTGAACGTGTTGCGTTTTCTTTC
AATCTGATTTACATTCTCATTTTTCTTATCCTTTTTTTCAGTTGTTCTTC
CATCTTCAACGAGAAAGATACTTCCCAGAACATAGGTTTGTAAATTTATT
TGTTAAATAAGATAAAAAGGGTTTGTAGGGTAATCAGTGCTCGTTTTTGA
ATTGGTTTTATATTTTTTGTGTTAAGTACTTAGCACCTAGTTTTTGCTTA
AAGTACCTTAAAGTGGGTAAAATTCCTTCCTGGATTACTCATATTTTTAA
GCCTACGACTTCCTGGTTTGAAAAAGGTTGTTTTTATATCACTATTCATT
GAATTTATAGGGCAAGATTTTATGCAGCTGAAATAGGATCAGCAATTGGA
TATCTCCATGGACTTAAGATTATTTACAGGTATAATTCATTATATTTTAT
TACAGAGTAATGAATCCTTTGCAAAATGAAACGAAACTGAAAGCACTATT
TTTCTCCTATAAACATCTGTTCAGATAATTTTGTATCTTGTAGAAATATA
AATCCTTTAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGAAAC
CAGAAAATATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGATTGC
TTTTCAATTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAATGGA
GATTTTTAAGGTCTCCTTTGATAAATTTCTGGCTTACAAGCTTTCCTTTA
TTTTTCATACCAAATGGTTCGAATCTGATATTTTTTTTTTTTTTCATGTT
TTATTTTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGG
CATTGAAAATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGGTAC
TTAAGATCATTTGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAACTTAA
AACAATTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATTTTT
CGAGAAATTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAGATT
GAAGTTTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGCCCC
AGAAGTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTT
TGGGAGCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCA
AGAGACACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACT
ACGAACCAATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTATCAT
TTTCATAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTCAA
AATGATATTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATATTT
TTTTCTTATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCCAAA
AAGAAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTATT
TGCTTTTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTTTTA
TTGGATAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAGAAA
ACTTTATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTATGT
TTGTTATTGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTATCAA
TTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCCAATG
TTGTAGGTTCACCATTAAATTTCTGTATCATTCATCATTCATTTATATTC
ATAATATTTCGCTCGGAAATTCATTCAGTATTTGAAACGTTATGTTAACT
TTCTGACTTGGTTCCTACAACCCTATGGTTTTTCGGTGTGACTGTTTATT
TGTTTACTTCAATGGGATAAATTTACGTGGTGATTTGATTNGTTCAGATA
ATTTTGTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAACCTTCGT
AATTTATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGG
TAAATTATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCATGATGT
CTTTCCCATGAAATAACAATGGAGATTTAAGGTTTCCTTTGATAAATTTC
TGGCTTACAAAGCTTTCCTTTATTTTTCATACCAAATGGTTCGAATCTGA
TATTCTTATTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTATTGACAG
ATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACC
TTTTGCGGGACACCAGAGGTACTTAAGATCAATCGAGGTTTTCCTTTGAG
CTGAATGGAAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTAATTTGA
ATCATTAGCTTAAAATTATTTTTAGAGAAATTTAACTTGAATCATTTTGA
GGCTTTATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCACATCTT
TTCTCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACGA
CAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATGT
ATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAAT
ATCCTTCACAAACCTCTACGACTACGAACCAATATTTCACAAAGCGCAAG
ACACCTTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTTTGTTTT
GACTTTGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATGTTTTTA
ATACAATTTTCTAGGAAATGTTTTTTTCTTATTTATTTACATTATCTTTA
TCTTTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGCT
CAGAAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTTTGTCTC
AAATTAATTAGTTAATTTTTTTGTTGGATAATCTAGAATATTTTCGAATT
CGGTTTTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGTTAAGGT
TTACTAATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATCCGATCA
CATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAAT
CGAGCCCACCTATAACCCTAATGTCGTAAGTTCACCATTAAATTTCTGTA
TCATTCATCATTCATTTATATTCATAATATTTCGTTCGGAAATTCATTCA
GTATTTGAAACGTTTGAAACGTTCTGTTAACTTTGTGACTTGGTTCCTAC
AACCCTATGGTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATGGGAT
AAATTTACGTGGTGGTTTGATTTCGCGAATCGGGGTAGAAATAGAAATTA
TAGAATATAAAATCTTCCCATGAAAATGAACGAAACTTTCTTTTAAATCG
AATTATTATAGTACAGCACCTGACCCCGAGAATGTAGGTGAAATTTGAAT
CAGACCTGAAAGATGTAGATTTGCATTTTAAAAGATATTAAATATTTTCA
ACGAAATTTTGAACTCCCAAAATCCTTATTATTGTTCTCTAAGCTAAATT
CATACTTTAGAAATATACGCTGACAAAAAATTAACAAATATATTAATTTC
ATCGTACTACAAATGAGGAAAAGTAAAAGAAGGACGAAAAGAAGGGACAA
GAAAGTTGTTTTTATTTTGTAGGTTGAAAATTTTGTGTTGAAATATGTGA
ATAATGTAACAACACCCCTGCCTCACAGCCCCGGTGGAACTTTTTCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAG
GCCCCCAAATTGTAGGTCAACTAACCCCAAAAGTTAGGTCAAACATTTTC
GTCAAAATATCTAACTCAGAACAGTAAATATTGAAATGGACTATTTTCAC
CATTTCCTTAGTTCATTAGGACTAAGAAAATACCCTATCATCATAACTTA
ATTCCAATGATTTCGATTTAGAGAGGATTTATTTAAAAAATGTCTCAGTT
CGGGTAATATCCAATCAACTTCCATTCAGATTTTCGTTGGAAAAAATTAA
TTCAAGTTAAAATTTTCTGTCCAGAAATAATCAATAAGATGTAACAGTAT
GCTCTGAAACAAATTTTTATGAAGTTGAACTATCGTTAGGGCTACAATGC
TAAAAAATGAGAAACCTACATTCTCGGGGTTTACTACATTCTCGGGGTCA
GGTGCTGTAACCTTTTTTGGAATATAGCGAGTGTGGCGTGTCCTCGCGGA
GAAAACGATGAAGGTCATCATCATCATCATTGCTCGACCGCAGTCGAGAC
TAGACGCTGAAGATAGAAATTTCGAGAAATCCCTGGAATTTAATCCTGGT
GAAAATTTATCCCATTAAAGTATTTTTCAGCTATTTTAAGCTTCTTTTTC
CAAATTCTCATCATGAAACCTTTCAATGTATTTTCAGAGTGGTCAATTAG
ATTTGAAGCATTTCGATCCAGAATTTGTAAGGGAGCCAGTACCTGGTAAG
TTGGCGATCAAAAAACGTTCTAAAATACTATTTGCTTTGGCGATCTCTTT
TTATTCGGAAGCCAGTTTTGAATTCGTCATAAAAAAATTAAATTAGAATC
GTCTGGTATGTCAAAGAGAGAACGATTATTGGTATTCATTGCAGTAATTA
AATGGAAACCGCATTTTTTATTTGTTTGTTTACGTTGCGAGTGATGAGGT
AACATCCGCTACGCGCAATGCGGCTTTCTCCTCTCTCATTCGGTCAGAAA
ATAATGAGAAGTTACGTTTTCAAAATTTTCTATGCGCTTCTATTAGAAAG
TATATAAACAGCCCGTTTTTTTAACACGATAACATGCTTTATTATCTTTC
TTCTCTAAAAAATACTTCGACCTAACGATACCCTAACAAATTTGATACTT
CGATCATTGAAACCGCAAATCAGAACTTTAAAGAGTCGAGGTTCTCCTGT
TTTTTTTTGTATTATCCAAATTACAAAAATTCTTCAATTTTCCCTCTCGT
AGCATCTGTGACAAAGGCCGATGGAAGTCAAGTCATTTCTGCAAGTGTGG
ATGACCCTGATGAAGCATTTGTTGGATTCACTTACGTACCCCAATCCGAA
GATTTAGTCGAATAAATGCATTCACCTGTGGCTCAATGCTGGCCACAGTA
TGGCGAATCATTTCTAGAAAATATAGTTGTTTACTTTCTCTTCGCAATAT
TCATGTCTGGTTGATTTATAACGTCGATGGACATACCGTGAAGCATTTAT
GGAGAACTGAACCAAGGTCCATTTTTTCTGTAATATTACAAATTTGTTAA
TAAAGAATGAGAGAGTGGTAAGGCAAAAATTTTATTTTACTTTTTTTTGT
ACTTTTTGTTTTGATTTAGATAACTTATGAACAATTCAGAATTATAAAAA
ACAACCTCTAGCAACTTTTTAATAATAGAGAACAAATTTAAAACAGGTTG
GGAAAATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039270-exon-sc0002054-1575043694:23179..23427TCONS_00039270-exon-sc0002054-1575043694:23179..23427Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:22976..23059TCONS_00039270-exon-sc0002054-1575043694:22976..23059Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:22003..22081TCONS_00039270-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:19289..19364TCONS_00039270-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:18311..18398TCONS_00039270-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:17722..17768TCONS_00039270-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:17424..17481TCONS_00039270-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:17106..17189TCONS_00039270-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:16923..16985TCONS_00039270-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:16655..16723TCONS_00039270-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:16293..16336TCONS_00039270-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:15999..16067TCONS_00039270-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:15802..15838TCONS_00039270-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:15532..15618TCONS_00039270-exon-sc0002054-1575043694:15532..15618Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:15135..15338TCONS_00039270-exon-sc0002054-1575043694:15135..15338Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:13514..13564TCONS_00039270-exon-sc0002054-1575043694:13514..13564Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:13253..13342TCONS_00039270-exon-sc0002054-1575043694:13253..13342Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:10983..11040TCONS_00039270-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1575043694:10011..10475TCONS_00039270-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:23179..23427TCONS_00039270-exon-sc0002054-1510915933:23179..23427Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:22976..23059TCONS_00039270-exon-sc0002054-1510915933:22976..23059Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:22003..22081TCONS_00039270-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:19289..19364TCONS_00039270-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:18311..18398TCONS_00039270-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:17722..17768TCONS_00039270-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:17424..17481TCONS_00039270-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:17106..17189TCONS_00039270-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:16923..16985TCONS_00039270-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:16655..16723TCONS_00039270-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:16293..16336TCONS_00039270-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:15999..16067TCONS_00039270-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:15802..15838TCONS_00039270-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:15532..15618TCONS_00039270-exon-sc0002054-1510915933:15532..15618Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:15135..15338TCONS_00039270-exon-sc0002054-1510915933:15135..15338Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:13514..13564TCONS_00039270-exon-sc0002054-1510915933:13514..13564Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:13253..13342TCONS_00039270-exon-sc0002054-1510915933:13253..13342Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:10983..11040TCONS_00039270-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1510915933:10011..10475TCONS_00039270-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:23179..23427TCONS_00039270-exon-sc0002054-1491911889:23179..23427Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:22976..23059TCONS_00039270-exon-sc0002054-1491911889:22976..23059Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:22003..22081TCONS_00039270-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:19289..19364TCONS_00039270-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:18311..18398TCONS_00039270-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:17722..17768TCONS_00039270-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:17424..17481TCONS_00039270-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:17106..17189TCONS_00039270-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:16923..16985TCONS_00039270-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:16655..16723TCONS_00039270-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:16293..16336TCONS_00039270-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:15999..16067TCONS_00039270-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:15802..15838TCONS_00039270-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:15532..15618TCONS_00039270-exon-sc0002054-1491911889:15532..15618Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:15135..15338TCONS_00039270-exon-sc0002054-1491911889:15135..15338Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:13514..13564TCONS_00039270-exon-sc0002054-1491911889:13514..13564Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:13253..13342TCONS_00039270-exon-sc0002054-1491911889:13253..13342Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:10983..11040TCONS_00039270-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039270-exon-sc0002054-1491911889:10011..10475TCONS_00039270-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..23427 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.6094	11.5616	24.6913	37.9741	55.4893	74.1632	41.8617	62.8733	1.22942	6.54812	7.25109	2.88375	6.28812	22.1861	5.38179	1.9058	7.33022	13.1344	3.06847	1.88501	26.5586	11.5142	13.0184	8.27099	22.8062	18.9676	8.88893	8.89092	13.6867	16.4266
Blast
[Close]
BLAST of TCONS_00039270 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 1 
Query:  193 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1641
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039270 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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