TCONS_00039269 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039269
Unique NameTCONS_00039269
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1981

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039269 ID=TCONS_00039269|Name=TCONS_00039269|organism=Clytia hemisphaerica|type=transcript|length=1981bp
TTGGTGTGAAGATTGCTAGGTACCAATCTAATATGAGTAACAAAGAAGGA
AATTACgttattttgatatgttttaaatttttttcttgaagttGATTAAA
TAGAAATGCCAAAAAGCCCAGCTACTCAAAATGTGCAAACAACAAATAAT
AGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTAGTTC
TgatgcaaaaaattcaaagaagtACACTGTTTACAAGGTAGCTGTTGAGG
CAAATGGCCGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACA
CTGTATGATAAGGTCAAAAAGGTTTATCCTGAACAGCTTCACAACTTTAA
GTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGATTTCATTA
AAATGCGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATTA
CCAAATATATTCAACCATGCTGACGTCAGAGAATTCTTCCAATTGGATAA
CCCCCGAAATTCTTCAATAAATATTGATGAAGAAGAAGATGAAGTTGCAG
AAGTTGCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATCAAAG
AAAGCGAAACCAAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAGGAAG
TTTTGGAAAGGTTTTGCTGGCAAAACacaaaactgaagaaaaattttatG
CAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGCGCGA
CATATCATGGCTGAAAGAAATgttcttttgaagaatgtgAAGCATCCTTT
CCTTGTTGGGCTGCACTACTCATTCCAAACTTCAGATAAATTGTATTTCG
TTTTGGATTATGTAAATGGTGGAGAGTTGTTCTTCCATCTTCAACGAGAA
AGATACTTCCCAGAACATAGGGCAAGATTTTATGCAGCTGAAATAGGATC
AGCAATTGGATATCTCCATGGACTTAAGATTATTTACAGGGACCTGAAAC
CAGAAAATATTCTATTGGACTCAAAGGGTCATGTTGTATTGACAGATTTT
GGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACCTTTTG
CGGGACACCAGAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACG
ACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATG
TATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAA
TATCCTTCACAAACCTCTACGACTACGaaccaatatttcacaaagcgCAA
GACACCTTTTAGAACAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGA
AGCTCAGAAGCTGATTTCGACGAGATCCGATCACATCCATTCTTCCGTAG
TATCAATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACC
CTAATGTCAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATTTGTA
AGGGAGCCAGTACCTGCATCTGTGACAAAGGCCGATGGAAGTCAAGTCAT
TTCTGCAAGTGTGGATGACCCTGATGAAGCATTTGTTGGATTCACTTACG
TACCCCAATCCGAAGATTTAGTCGAATAAATGCATTCACCTGTGGCTCAA
TGCTGGCCACAGTATGGCGAATCATTTCTAGAAAATATAGTTGTTTACTT
TCTCTTCGCAATATTCATGTCTGGTTGATTTATAACGTCGATGGACATAC
CGTGAAGCATTTATGGAGAACTGAACCAAGGTCCATTTTTTCTGTAATAT
TACAAATTTGTTAATAAAGAATGAGAGAGTGGTAaggcaaaaattttatt
ttacttttttttgtactttttgttttgatttagatAACTTATGAACAATT
CagaattataaaaaacaacCTCTAGCAACTTTTTAATAATAgagaacaaa
tttaaaacagGTTGGGAAAATTATTAACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..23406-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039269 ID=TCONS_00039269|Name=TCONS_00039269|organism=Clytia hemisphaerica|type=transcript|length=13396bp|location=Sequence derived from alignment at sc0002054:10011..23406- (Clytia hemisphaerica)
TTGGTGTGAAGATTGCTAGGTACCAATCTAATATGAGTAACAAAGAAGGA
AATTACGTTATTTTGATATGTTTTAAATTTTTTTCTTGAAGTTGATTAAA
TAGAAATGCCAAAAAGCCCAGCTACTCAAAATGTGCAAACAACAAATAAT
AGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTAGTTC
TGATGCAAAAAATTCAAAGAAGTACACTGTAAGTATAAGTATTCTAAATA
ATTTTCATTCAAGTTTTGCATTTTTAACACCTTTTGTCGATTTGTCAAAT
TATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGGTT
TACAAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAG
ATATAATGAGTTCCATACACTGTATGATAAGGTTAGAAATTTATGGCTTG
GAAACGTTTTGTGCTACAATTGATAATTTTTTGTATTTGCACTGTTTCTG
TTTACCTTATTCTGTGCTGCTGTGTAATCAAAAATTTTCTTCNTGCAAAC
AACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGA
CACTTAGTTCTGATGCAAAAAATTCAAAGAAGTACACTGTAAGTATAAGT
ATTCTAAATAATTTTCATTCAAGTTTTGCATTTTTAACACCTTTTGTCGA
TTTGTCAAATTATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATG
TTTTAAGGTTTACAAGGTAGCTGTTGAGNCACCTTTTGTCGATTTGTCAA
ATTATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGG
TTTACAAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGA
AGATATAATGAGTTCCATACACTGTATGATAAGGTTAGAAATTTATGGCT
TGGAAACGTTTTGTGCTACAATTGATAATTTTTTGTATTTGCACTGTTTC
TGTTTACCTTATTCTGTGCTGCTGTGTAATCAAAAATTTTCTTCTAGAAA
TTTCTTGAAAATATTTGTATTAAAAACTCATTCTGAAAAAGAAAAAGATT
AAAGTGGCATTTTGTCATCTATCATAAGTGTAACTTAATTACAACTAATG
TTTCCTTGATAGGAAAACCAAAACCTTTTAATTGTGACTCTGTAACTATT
CTTGTAGCAAAAAAATGCTCAAACAATATGTATGCAAATCCTGTGTTAAT
GCATCTTTTGCTTTTTTAGCTGACAACTTTTTGACATGTTTATTTACATA
TGAATCATTCATTTTTTCAATATAGGTCAAAAAGGTTTATCCTGAACAGC
TTCACAACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGAC
CCAGGTAAAAATTTTATACGCCCTCTATCAAATTATCCCTCAAAATTTTA
AATTCAAAAACTGAAATGAAAATTTAAAAGATTAAAGAGGTATTTCATTT
CACTGGAGTTTGTTTACGTGAATAAAAAACAAAGAGATTGATTTTATCAA
CTTTGTTTAGATAAGCTTAATTTGATTTGCTCTGTTTTGATGATAAATCT
TATAAACACCTTTGTGTTATAATCTTTGTAGAACTTTGCAGAAGAATTTA
CATCATTTTTTGTTGCATTTTCTCATGTTCTTGTAATAAAGATATTTTTG
TTGTTTTCAATAAAAGAAACTAAAAGTTGCCATCTGGTGTATCAAAAAGT
AATAAATAATGAAAGACTTTCATAAAAAGAGAAACAAGTTTGATATATAA
AAGTGAAATGTACTTGCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTATAT
TTGAAAAGCAATATCAGCCTGCCTCTTCATATTTACATCAAAAAAATATC
ATACAAGTAAAAGATGTATCCTTATTTCTGTTCCCATACTTTGATTTGAA
ATTAAATCGTCTCCTACCTCTATTACTCTGCCATCACCATTGGCGTCCTT
GTCTCCTTGTGTTCTCGTCATACAAGTCAATTCATCTAAGTGAATGAAAA
TAAGCACATATCTATCCTTCCTTGCTGTGAAGAAAGTGCTTGACAAATAA
TTCAGTCATGGTTCTAATGCTTTTATCACTCCGTTCTTACAGATTTCATT
AAAATGCGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATT
ACCAAATATATTCAACCAGTAAGTAATGATGAGAGTTGCTTGATTTTTCA
TGTTTTTCTACAACTCCTTATAAAATAAGATTAATACTATCAAAATTATT
TTTTTGTCAAACTAATTTAAATGTGAGATGGTTTTCTTATGTTAATGCTC
TCTTCCCATAGCGTCAGCCCCCCCTGGAAACTGGGGAAGGAAATCACTCT
AAAATATTCCCGAAAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAG
TTCATGAAGCTGAAAAATTTTGTCTGCGGGGNAAATCACTCTAAAATATT
CCCGAAAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCATGAA
GCTGAAAAATTTTGTCTGCGGGGGAATATTTTAATATGAAATATTCAAAA
TATGTAAAATATACTATCTTCTATCTTTTAATATTTTACTTGGCTCTGCA
ACATCGATCACAGACACAGACAAAACTATCTTCTACTTTTTTTTCCTGGG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGAAATATACTA
TCTTCTATCTTTTAATATTTTACTTGGCTCTGCAACATCGATCACAGACA
CAGACAAAACTATCTTCTACTTTTTTTTCCTGGGACAAATTTTAGAAAGT
GTAGATGGTGGCAAATCTTGAGAGCTATAAACAAATTTTTAAATTATTGG
GGGACTTAACTTTTTGTCTGGGACCTAAACACTGGCTGAGGATATGGCTC
TTCCACGTTATAGGTGAAAAATACCAAAAATTAAAGAATTTGTTAGAAAG
TTGTTCTCAATCAGGTTTCAATCAAAATAAGAGTTCTATCTTTCAAAAGG
TTAACCTTCCAGTGCATTCTTAAAAAAAACAGTTTAATGACCTGCTTCAT
TTTCATAGTGCTGACGTCAGAGAATTCTTCCAATTGGATAACCCCCGAAA
TTCTTCAATAAATATTGATGAAGAAGAAGATGAAGTTGCAGAAGTTGTAA
GAATCCATTTTTGTTCGCATTGTATGATGTCGGTTATGCCAAATTATACA
AACCACCAAAGAAATTCTGAAATTCTGAAAAAAGAGCCATTTAAAAAAAG
TTGGAAATGGCAGCAGTGTACAAGATACAAACTTTCCCTTTTTTGATAAA
ATCTAGTTTCACCAGCCATTAATATTTTGTATTACTTTATACCCTCAAGA
AAGCTTTTTTATAAAACTAAAAGCTAAAAGCTTTTTAAATTTGTTTTGGG
AAATAGGCTCTCAAGAACTAAAGCATAATTTGAAAAAATATATAAAATCC
CAGCATGTTGTACTTTCTTTCTATTGATAAACCTGTGTTGTCTTGATCTG
AAAATCTATTCAAAATAAAACTTTTCTTTTTCAAAATGTTAGAGACTTTA
CTAATGAAAACTTTTTCTTCAAATATGGCTTATTTTCAGGTACTTATAAT
AAATTTTTTTAATTTTCTTAAATCTAAAATCAAACACTGTATTTGTGTGG
TCTGAGACTCGTTTTTGATACCTTCTTATCTTTCTAAGGCATCAGAGTTG
GAAAATGTTGACCTTGGGCAATCTGAATCAAAGAAGTAAGTTTATTAAAG
TCCATTTAAAGGAAATTATTCCAAAAACGAACTTTCATATTTGCCTCTCT
TGAGTTTGCATGGATTTATCTTTCAGAAACTAATTTCGTTTTCAGTGAGC
CTACCTTTGCTTTTATCCAATTTTAAGGTGTTTGTAATTGAGTTTTTCAA
TTGATTTGTGAAATATCTGTCATCTTACTCGTTAATTTCACTGATAATGA
TGAAATATTCATCTTACAACTTCAGAGCGAAACCAAGTGATTTTGCATTC
TTAAAAGTGATTGGTAAAGGAAGTTTTGGAAAGGTAATAACTCTGAACAG
TAACATTTTTTCTTTGGAAAATATAAGATATCCTTGGGTTTTGATTTACC
AAAATGTCTAAATTTATGTCCCCTTTGATTTAGTTTTCAATCATTCCCCT
CGCTTTGATTTAGTGTTGTTGGAAATGATGAGTGTTTAATTGATAAAAGT
ACAATGATCAATGTTTGGAAGAAATCTAAACCATAAAGTTTCAGCAAGTT
TAACTTTTTTGATTTAGGTTTTGCTGGCAAAACACAAAACTGAAGAAAAA
TTTTATGCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGA
GGTATGATACTTACCTCATTGTTTTTTCAGTTTTTTTTTAAATTGGAACA
AGATCATTGCATTTGCAAAGACATAATGTAAAATAAAGTAATATTTTGAA
TTCGATGGATACTTTTTACAGGCGCGACATATCATGGCTGAAAGAAATGT
TCTTTTGAAGAATGTGAAGCATCCTTTCCTTGTTGTAAGTATTTCATGCA
AAATTAACGATTGAGGATTCATTTTCATCTCCAATTCAATACCGATGCAT
AGAATATTTTATTCAAGAAAACCTTCGATAATGCAATGAAATGTGATTTG
ATGATGTGATTTTTCCTCATNAACCTTCGATAATGCAATGAAATGTGATT
TGATGATGTGATTTTTCCTCATCTTCTTTATAGGGGCTGCACTACTCATT
CCAAACTTCAGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAG
AGGTAAAATCTTACAACTCTTAACCAATTTTTTGATAAATTGACTTCAAA
GAAGTTTTGCTACTGAGGAGCCTTAGGGAGTTTTTATCATTTACAGGAGG
AGATAACGAAGCCTCAAGGTCAGCTGGTCAAATTAAAATCAAAGTGCATG
AAGTATAAGGAAAACTGTCTCAGCTATGTACTTTATACCAGAAGAAGTCC
CAAGAAATACAGGGGCGATAAGGCTATTAGAAATTCAAGGACTAGTAAGC
GACGTGTTGAACGTGTTGCGTTTTCTTTCAATCTGATTTACATTCTCATT
TTTCTTATCCTTTTTTTCAGTTGTTCTTCCATCTTCAACGAGAAAGATAC
TTCCCAGAACATAGGTTTGTAAATTTATTTGTTAAATAAGATAAAAAGGG
TTTGTAGGGTAATCAGTGCTCGTTTTTGAATTGGTTTTATATTTTTTGTG
TTAAGTACTTAGCACCTAGTTTTTGCTTAAAGTACCTTAAAGTGGGTAAA
ATTCCTTCCTGGATTACTCATATTTTTAAGCCTACGACTTCCTGGTTTGA
AAAAGGTTGTTTTTATATCACTATTCATTGAATTTATAGGGCAAGATTTT
ATGCAGCTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGATT
ATTTACAGGTATAATTCATTATATTTTATTACAGAGTAATGAATCCTTTG
CAAAATGAAACGAAACTGAAAGCACTATTTTTCTCCTATAAACATCTGTT
CAGATAATTTTGTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAAC
CTTCGTAATTTATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACT
CAAAGGTAAATTATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCA
TGATGTCTTTCCCATGAAATAACAATGGAGATTTTTAAGGTCTCCTTTGA
TAAATTTCTGGCTTACAAGCTTTCCTTTATTTTTCATACCAAATGGTTCG
AATCTGATATTTTTTTTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTA
TTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAAC
ATCAACCTTTTGCGGGACACCAGAGGTACTTAAGATCATTTGAGGTTTTC
CTTTGAGCTGAATGGAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTA
ATTTGAATCATTAGCTTAAAATTATTTTTCGAGAAATTTAACTTGAATCA
TTTTGAGGCTTTATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCA
CATCTTTTCTCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATC
CTACGACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAA
TGATGTATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTAC
GACAATATCCTTCACAAACCTCTACGACTACGAACCAATATTTCACAAAG
CGCAAGACACCTTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTT
TGTTTTGACTTTGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATG
TTTTTAATACAATTTTCTAGGAAATATTTTTTTCTTATTTATTTACATTA
TCTTTATCTTTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAG
GAAGCTCAGAAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTT
TGTCTCAAATTAATTAGTTAATTTTTTTATTGGATAATCTAGAATATTTT
CGAATTCGGTTTTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGT
TAAGGTTTACTAATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATC
CGATCACATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAA
GAAAATCGAGCCCACCTATAACCCCAATGTTGTAGGTTCACCATTAAATT
TCTGTATCATTCATCATTCATTTATATTCATAATATTTCGCTCGGAAATT
CATTCAGTATTTGAAACGTTATGTTAACTTTCTGACTTGGTTCCTACAAC
CCTATGGTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATGGGATAAA
TTTACGTGGTGATTTGATTNGTTCAGATAATTTTGTATCTTGTAGAAATA
TAAATCCTTTAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGAA
ACCAGAAAATATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGATT
GCTTTTCAATTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAATG
GAGATTTAAGGTTTCCTTTGATAAATTTCTGGCTTACAAAGCTTTCCTTT
ATTTTTCATACCAAATGGTTCGAATCTGATATTCTTATTTTTTTTCATGT
TTTATTTTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAG
GCATTGAAAATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGGTA
CTTAAGATCAATCGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAAACTT
AAAACAATTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATTT
TTAGAGAAATTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAGA
TTGAAGTTTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGCC
CCAGAAGTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTG
TTTGGGAGCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACT
CAAGAGACACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGA
CTACGAACCAATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTATC
ATTTTCATAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTC
AAAATGATATTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATGT
TTTTTTCTTATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCCA
AAAAGAAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTA
TTTGCTTTTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTTT
TGTTGGATAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAGA
AAACTTTATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTAT
GTTTGTTATTGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTATC
AATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCTAA
TGTCGTAAGTTCACCATTAAATTTCTGTATCATTCATCATTCATTTATAT
TCATAATATTTCGTTCGGAAATTCATTCAGTATTTGAAACGTTTGAAACG
TTCTGTTAACTTTGTGACTTGGTTCCTACAACCCTATGGTTTTTCGGTGT
GACTGTTTATTTGTTTACTTCAATGGGATAAATTTACGTGGTGGTTTGAT
TTCGCGAATCGGGGTAGAAATAGAAATTATAGAATATAAAATCTTCCCAT
GAAAATGAACGAAACTTTCTTTTAAATCGAATTATTATAGTACAGCACCT
GACCCCGAGAATGTAGGTGAAATTTGAATCAGACCTGAAAGATGTAGATT
TGCATTTTAAAAGATATTAAATATTTTCAACGAAATTTTGAACTCCCAAA
ATCCTTATTATTGTTCTCTAAGCTAAATTCATACTTTAGAAATATACGCT
GACAAAAAATTAACAAATATATTAATTTCATCGTACTACAAATGAGGAAA
AGTAAAAGAAGGACGAAAAGAAGGGACAAGAAAGTTGTTTTTATTTTGTA
GGTTGAAAATTTTGTGTTGAAATATGTGAATAATGTAACAACACCCCTGC
CTCACAGCCCCGGTGGAACTTTTTCCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAAGGCCCCCAAATTGTAGGTCAAC
TAACCCCAAAAGTTAGGTCAAACATTTTCGTCAAAATATCTAACTCAGAA
CAGTAAATATTGAAATGGACTATTTTCACCATTTCCTTAGTTCATTAGGA
CTAAGAAAATACCCTATCATCATAACTTAATTCCAATGATTTCGATTTAG
AGAGGATTTATTTAAAAAATGTCTCAGTTCGGGTAATATCCAATCAACTT
CCATTCAGATTTTCGTTGGAAAAAATTAATTCAAGTTAAAATTTTCTGTC
CAGAAATAATCAATAAGATGTAACAGTATGCTCTGAAACAAATTTTTATG
AAGTTGAACTATCGTTAGGGCTACAATGCTAAAAAATGAGAAACCTACAT
TCTCGGGGTTTACTACATTCTCGGGGTCAGGTGCTGTAACCTTTTTTGGA
ATATAGCGAGTGTGGCGTGTCCTCGCGGAGAAAACGATGAAGGTCATCAT
CATCATCATTGCTCGACCGCAGTCGAGACTAGACGCTGAAGATAGAAATT
TCGAGAAATCCCTGGAATTTAATCCTGGTGAAAATTTATCCCATTAAAGT
ATTTTTCAGCTATTTTAAGCTTCTTTTTCCAAATTCTCATCATGAAACCT
TTCAATGTATTTTCAGAGTGGTCAATTAGATTTGAAGCATTTCGATCCAG
AATTTGTAAGGGAGCCAGTACCTGGTAAGTTGGCGATCAAAAAACGTTCT
AAAATACTATTTGCTTTGGCGATCTCTTTTTATTCGGAAGCCAGTTTTGA
ATTCGTCATAAAAAAATTAAATTAGAATCGTCTGGTATGTCAAAGAGAGA
ACGATTATTGGTATTCATTGCAGTAATTAAATGGAAACCGCATTTTTTAT
TTGTTTGTTTACGTTGCGAGTGATGAGGTAACATCCGCTACGCGCAATGC
GGCTTTCTCCTCTCTCATTCGGTCAGAAAATAATGAGAAGTTACGTTTTC
AAAATTTTCTATGCGCTTCTATTAGAAAGTATATAAACAGCCCGTTTTTT
TAACACGATAACATGCTTTATTATCTTTCTTCTCTAAAAAATACTTCGAC
CTAACGATACCCTAACAAATTTGATACTTCGATCATTGAAACCGCAAATC
AGAACTTTAAAGAGTCGAGGTTCTCCTGTTTTTTTTTGTATTATCCAAAT
TACAAAAATTCTTCAATTTTCCCTCTCGTAGCATCTGTGACAAAGGCCGA
TGGAAGTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATTTG
TTGGATTCACTTACGTACCCCAATCCGAAGATTTAGTCGAATAAATGCAT
TCACCTGTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAAAA
TATAGTTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTATAA
CGTCGATGGACATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTCCA
TTTTTTCTGTAATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGTAA
GGCAAAAATTTTATTTTACTTTTTTTTGTACTTTTTGTTTTGATTTAGAT
AACTTATGAACAATTCAGAATTATAAAAAACAACCTCTAGCAACTTTTTA
ATAATAGAGAACAAATTTAAAACAGGTTGGGAAAATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039269-exon-sc0002054-1575043694:23179..23406TCONS_00039269-exon-sc0002054-1575043694:23179..23406Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:22474..22557TCONS_00039269-exon-sc0002054-1575043694:22474..22557Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:22003..22081TCONS_00039269-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:19289..19364TCONS_00039269-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:18311..18398TCONS_00039269-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:17722..17768TCONS_00039269-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:17424..17481TCONS_00039269-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:17106..17189TCONS_00039269-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:16923..16985TCONS_00039269-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:16655..16723TCONS_00039269-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:16293..16336TCONS_00039269-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:15999..16067TCONS_00039269-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:14379..14415TCONS_00039269-exon-sc0002054-1575043694:14379..14415Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:14110..14196TCONS_00039269-exon-sc0002054-1575043694:14110..14196Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:13712..13915TCONS_00039269-exon-sc0002054-1575043694:13712..13915Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:13514..13564TCONS_00039269-exon-sc0002054-1575043694:13514..13564Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:13253..13342TCONS_00039269-exon-sc0002054-1575043694:13253..13342Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:10983..11040TCONS_00039269-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1575043694:10011..10475TCONS_00039269-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:23179..23406TCONS_00039269-exon-sc0002054-1510915933:23179..23406Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:22474..22557TCONS_00039269-exon-sc0002054-1510915933:22474..22557Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:22003..22081TCONS_00039269-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:19289..19364TCONS_00039269-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:18311..18398TCONS_00039269-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:17722..17768TCONS_00039269-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:17424..17481TCONS_00039269-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:17106..17189TCONS_00039269-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:16923..16985TCONS_00039269-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:16655..16723TCONS_00039269-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:16293..16336TCONS_00039269-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:15999..16067TCONS_00039269-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:14379..14415TCONS_00039269-exon-sc0002054-1510915933:14379..14415Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:14110..14196TCONS_00039269-exon-sc0002054-1510915933:14110..14196Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:13712..13915TCONS_00039269-exon-sc0002054-1510915933:13712..13915Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:13514..13564TCONS_00039269-exon-sc0002054-1510915933:13514..13564Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:13253..13342TCONS_00039269-exon-sc0002054-1510915933:13253..13342Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:10983..11040TCONS_00039269-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1510915933:10011..10475TCONS_00039269-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:23179..23406TCONS_00039269-exon-sc0002054-1491911889:23179..23406Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:22474..22557TCONS_00039269-exon-sc0002054-1491911889:22474..22557Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:22003..22081TCONS_00039269-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:19289..19364TCONS_00039269-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:18311..18398TCONS_00039269-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:17722..17768TCONS_00039269-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:17424..17481TCONS_00039269-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:17106..17189TCONS_00039269-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:16923..16985TCONS_00039269-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:16655..16723TCONS_00039269-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:16293..16336TCONS_00039269-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:15999..16067TCONS_00039269-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:14379..14415TCONS_00039269-exon-sc0002054-1491911889:14379..14415Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:14110..14196TCONS_00039269-exon-sc0002054-1491911889:14110..14196Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:13712..13915TCONS_00039269-exon-sc0002054-1491911889:13712..13915Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:13514..13564TCONS_00039269-exon-sc0002054-1491911889:13514..13564Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:13253..13342TCONS_00039269-exon-sc0002054-1491911889:13253..13342Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:10983..11040TCONS_00039269-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039269-exon-sc0002054-1491911889:10011..10475TCONS_00039269-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..23406 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.3674	27.0859	43.0993	32.1638	35.8158	12.766	98.0579	110.938	67.4577	63.9359	29.5827	46.1417	37.5228	22.3826	30.7731	30.3358	33.6105	29.2635	28.4626	32.8461	28.6227	36.6881	23.5897	43.5569	9.24719	4.90383	52.0947	32.7677	23.5082	22.0787
Blast
[Close]
BLAST of TCONS_00039269 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 1 
Query:  172 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1620
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039269 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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