TCONS_00039268 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039268
Unique NameTCONS_00039268
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1905

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039268 ID=TCONS_00039268|Name=TCONS_00039268|organism=Clytia hemisphaerica|type=transcript|length=1905bp
atttttttcttgaagttGATTAAATAGAAATGCCAAAAAGCCCAGCTACT
CAAAATGTGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGT
TCCTGACTCACAGACACTTAGTTCTgatgcaaaaaattcaaagaagtACA
CTGTTTACAAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTT
CGAAGATATAATGAGTTCCATACACTGTATGATAAGGTCAAAAAGGTTTA
TCCTGAACAGCTTCACAACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGA
ACAATTTTGACCCAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGAT
TTTGTAAGGAAAATATTAGGATTACCAAATATATTCAACCATGCTGACGT
CAGAGAATTCTTCCAATTGGATAACCCCCGAAATTCTTCAATAAATATTG
ATGAAGAAGAAGATGAAGTTGCAGAAGTTGCATCAGAGTTGGAAAATGTT
GACCTTGGGCAATCTGAATCAAAGAAAGCGAAACCAAGTGATTTTGCATT
CTTAAAAGTGATTGGTAAAGGAAGTTTTGGAAAGGTTTTGCTGGCAAAAC
acaaaactgaagaaaaattttatGCAATCAAAGTCCTGCACAAAGCAGCT
ATTCGTAAAAGAAATGAGGCGCGACATATCATGGCTGAAAGAAATgttct
tttgaagaatgtgAAGCATCCTTTCCTTGTTGGGCTGCACTACTCATTCC
AAACTTCAGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAG
TTGTTCTTCCATCTTCAACGAGAAAGATACTTCCCAGAACATAGGGCAAG
ATTTTATGCAGCTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTA
AGATTATTTACAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAG
GGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAAA
TAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGTATTTGGCCCCAG
AAGTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTG
GGAGCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAG
AGACACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTAC
GaaccaatatttcacaaagcgCAAGACACCTTTTAGAACAGCTCCTCCAA
AAAGAAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGACGAGAT
CCGATCACATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACA
AGAAAATCGAGCCCACCTATAACCCCAATGTTAGTGGTCAATTAGATTTG
AAGCATTTCGATCCAGAATTTGTAAGGGAGCCAGTACCTGCATCTGTGAC
AAAGGCCGATGGAAGTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATG
AAGCATTTGTTGGATTCACTTACGTACCCCAATCCGAAGATTTAGTCGAA
TAAATGCATTCACCTGTGGCTCAATGCTGGCCACAGTATGGCGAATCATT
TCTAGAAAATATAGTTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTT
GATTTATAACGTCGATGGACATACCGTGAAGCATTTATGGAGAACTGAAC
CAAGGTCCATTTTTTCTGTAATATTACAAATTTGTTAATAAAGAATGAGA
GAGTGGTAaggcaaaaattttattttacttttttttgtactttttgtttt
gatttagatAACTTATGAACAATTCagaattataaaaaacaacCTCTAGC
AACTTTTTAATAATAgagaacaaatttaaaacagGTTGGGAAAATTATTA
ACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..23330-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039268 ID=TCONS_00039268|Name=TCONS_00039268|organism=Clytia hemisphaerica|type=transcript|length=13320bp|location=Sequence derived from alignment at sc0002054:10011..23330- (Clytia hemisphaerica)
ATTTTTTTCTTGAAGTTGATTAAATAGAAATGCCAAAAAGCCCAGCTACT
CAAAATGTGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGT
TCCTGACTCACAGACACTTAGTTCTGATGCAAAAAATTCAAAGAAGTACA
CTGTAAGTATAAGTATTCTAAATAATTTTCATTCAAGTTTTGCATTTTTA
ACACCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTATAT
TGAATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGGCAAATGG
CCGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTATG
ATAAGGTTAGAAATTTATGGCTTGGAAACGTTTTGTGCTACAATTGATAA
TTTTTTGTATTTGCACTGTTTCTGTTTACCTTATTCTGTGCTGCTGTGTA
ATCAAAAATTTTCTTCNTGCAAACAACAAATAATAGTAACAAAGATCTAG
GGATTAGTGTTCCTGACTCACAGACACTTAGTTCTGATGCAAAAAATTCA
AAGAAGTACACTGTAAGTATAAGTATTCTAAATAATTTTCATTCAAGTTT
TGCATTTTTAACACCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAA
TTATTTATATTGAATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTG
AGNCACCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTAT
ATTGAATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGGCAAAT
GGCCGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTA
TGATAAGGTTAGAAATTTATGGCTTGGAAACGTTTTGTGCTACAATTGAT
AATTTTTTGTATTTGCACTGTTTCTGTTTACCTTATTCTGTGCTGCTGTG
TAATCAAAAATTTTCTTCTAGAAATTTCTTGAAAATATTTGTATTAAAAA
CTCATTCTGAAAAAGAAAAAGATTAAAGTGGCATTTTGTCATCTATCATA
AGTGTAACTTAATTACAACTAATGTTTCCTTGATAGGAAAACCAAAACCT
TTTAATTGTGACTCTGTAACTATTCTTGTAGCAAAAAAATGCTCAAACAA
TATGTATGCAAATCCTGTGTTAATGCATCTTTTGCTTTTTTAGCTGACAA
CTTTTTGACATGTTTATTTACATATGAATCATTCATTTTTTCAATATAGG
TCAAAAAGGTTTATCCTGAACAGCTTCACAACTTTAAGTTGCCAGGCAAG
AAATTGTTTGGGAACAATTTTGACCCAGGTAAAAATTTTATACGCCCTCT
ATCAAATTATCCCTCAAAATTTTAAATTCAAAAACTGAAATGAAAATTTA
AAAGATTAAAGAGGTATTTCATTTCACTGGAGTTTGTTTACGTGAATAAA
AAACAAAGAGATTGATTTTATCAACTTTGTTTAGATAAGCTTAATTTGAT
TTGCTCTGTTTTGATGATAAATCTTATAAACACCTTTGTGTTATAATCTT
TGTAGAACTTTGCAGAAGAATTTACATCATTTTTTGTTGCATTTTCTCAT
GTTCTTGTAATAAAGATATTTTTGTTGTTTTCAATAAAAGAAACTAAAAG
TTGCCATCTGGTGTATCAAAAAGTAATAAATAATGAAAGACTTTCATAAA
AAGAGAAACAAGTTTGATATATAAAAGTGAAATGTACTTGCTTTTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAAACTATATTTGAAAAGCAATATCAGCCTGCCTCT
TCATATTTACATCAAAAAAATATCATACAAGTAAAAGATGTATCCTTATT
TCTGTTCCCATACTTTGATTTGAAATTAAATCGTCTCCTACCTCTATTAC
TCTGCCATCACCATTGGCGTCCTTGTCTCCTTGTGTTCTCGTCATACAAG
TCAATTCATCTAAGTGAATGAAAATAAGCACATATCTATCCTTCCTTGCT
GTGAAGAAAGTGCTTGACAAATAATTCAGTCATGGTTCTAATGCTTTTAT
CACTCCGTTCTTACAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGA
TTTTGTAAGGAAAATATTAGGATTACCAAATATATTCAACCAGTAAGTAA
TGATGAGAGTTGCTTGATTTTTCATGTTTTTCTACAACTCCTTATAAAAT
AAGATTAATACTATCAAAATTATTTTTTTGTCAAACTAATTTAAATGTGA
GATGGTTTTCTTATGTTAATGCTCTCTTCCCATAGCGTCAGCCCCCCCTG
GAAACTGGGGAAGGAAATCACTCTAAAATATTCCCGAAAAACTTAATGGT
TGGCTTCAATTACTTAATTTAAAGTTCATGAAGCTGAAAAATTTTGTCTG
CGGGGNAAATCACTCTAAAATATTCCCGAAAAACTTAATGGTTGGCTTCA
ATTACTTAATTTAAAGTTCATGAAGCTGAAAAATTTTGTCTGCGGGGGAA
TATTTTAATATGAAATATTCAAAATATGTAAAATATACTATCTTCTATCT
TTTAATATTTTACTTGGCTCTGCAACATCGATCACAGACACAGACAAAAC
TATCTTCTACTTTTTTTTCCTGGGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATATGAAATATACTATCTTCTATCTTTTAATATTTTACTTG
GCTCTGCAACATCGATCACAGACACAGACAAAACTATCTTCTACTTTTTT
TTCCTGGGACAAATTTTAGAAAGTGTAGATGGTGGCAAATCTTGAGAGCT
ATAAACAAATTTTTAAATTATTGGGGGACTTAACTTTTTGTCTGGGACCT
AAACACTGGCTGAGGATATGGCTCTTCCACGTTATAGGTGAAAAATACCA
AAAATTAAAGAATTTGTTAGAAAGTTGTTCTCAATCAGGTTTCAATCAAA
ATAAGAGTTCTATCTTTCAAAAGGTTAACCTTCCAGTGCATTCTTAAAAA
AAACAGTTTAATGACCTGCTTCATTTTCATAGTGCTGACGTCAGAGAATT
CTTCCAATTGGATAACCCCCGAAATTCTTCAATAAATATTGATGAAGAAG
AAGATGAAGTTGCAGAAGTTGTAAGAATCCATTTTTGTTCGCATTGTATG
ATGTCGGTTATGCCAAATTATACAAACCACCAAAGAAATTCTGAAATTCT
GAAAAAAGAGCCATTTAAAAAAAGTTGGAAATGGCAGCAGTGTACAAGAT
ACAAACTTTCCCTTTTTTGATAAAATCTAGTTTCACCAGCCATTAATATT
TTGTATTACTTTATACCCTCAAGAAAGCTTTTTTATAAAACTAAAAGCTA
AAAGCTTTTTAAATTTGTTTTGGGAAATAGGCTCTCAAGAACTAAAGCAT
AATTTGAAAAAATATATAAAATCCCAGCATGTTGTACTTTCTTTCTATTG
ATAAACCTGTGTTGTCTTGATCTGAAAATCTATTCAAAATAAAACTTTTC
TTTTTCAAAATGTTAGAGACTTTACTAATGAAAACTTTTTCTTCAAATAT
GGCTTATTTTCAGGTACTTATAATAAATTTTTTTAATTTTCTTAAATCTA
AAATCAAACACTGTATTTGTGTGGTCTGAGACTCGTTTTTGATACCTTCT
TATCTTTCTAAGGCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGA
ATCAAAGAAGTAAGTTTATTAAAGTCCATTTAAAGGAAATTATTCCAAAA
ACGAACTTTCATATTTGCCTCTCTTGAGTTTGCATGGATTTATCTTTCAG
AAACTAATTTCGTTTTCAGTGAGCCTACCTTTGCTTTTATCCAATTTTAA
GGTGTTTGTAATTGAGTTTTTCAATTGATTTGTGAAATATCTGTCATCTT
ACTCGTTAATTTCACTGATAATGATGAAATATTCATCTTACAACTTCAGA
GCGAAACCAAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAGGAAGTTT
TGGAAAGGTAATAACTCTGAACAGTAACATTTTTTCTTTGGAAAATATAA
GATATCCTTGGGTTTTGATTTACCAAAATGTCTAAATTTATGTCCCCTTT
GATTTAGTTTTCAATCATTCCCCTCGCTTTGATTTAGTGTTGTTGGAAAT
GATGAGTGTTTAATTGATAAAAGTACAATGATCAATGTTTGGAAGAAATC
TAAACCATAAAGTTTCAGCAAGTTTAACTTTTTTGATTTAGGTTTTGCTG
GCAAAACACAAAACTGAAGAAAAATTTTATGCAATCAAAGTCCTGCACAA
AGCAGCTATTCGTAAAAGAAATGAGGTATGATACTTACCTCATTGTTTTT
TCAGTTTTTTTTTAAATTGGAACAAGATCATTGCATTTGCAAAGACATAA
TGTAAAATAAAGTAATATTTTGAATTCGATGGATACTTTTTACAGGCGCG
ACATATCATGGCTGAAAGAAATGTTCTTTTGAAGAATGTGAAGCATCCTT
TCCTTGTTGTAAGTATTTCATGCAAAATTAACGATTGAGGATTCATTTTC
ATCTCCAATTCAATACCGATGCATAGAATATTTTATTCAAGAAAACCTTC
GATAATGCAATGAAATGTGATTTGATGATGTGATTTTTCCTCATNAACCT
TCGATAATGCAATGAAATGTGATTTGATGATGTGATTTTTCCTCATCTTC
TTTATAGGGGCTGCACTACTCATTCCAAACTTCAGATAAATTGTATTTCG
TTTTGGATTATGTAAATGGTGGAGAGGTAAAATCTTACAACTCTTAACCA
ATTTTTTGATAAATTGACTTCAAAGAAGTTTTGCTACTGAGGAGCCTTAG
GGAGTTTTTATCATTTACAGGAGGAGATAACGAAGCCTCAAGGTCAGCTG
GTCAAATTAAAATCAAAGTGCATGAAGTATAAGGAAAACTGTCTCAGCTA
TGTACTTTATACCAGAAGAAGTCCCAAGAAATACAGGGGCGATAAGGCTA
TTAGAAATTCAAGGACTAGTAAGCGACGTGTTGAACGTGTTGCGTTTTCT
TTCAATCTGATTTACATTCTCATTTTTCTTATCCTTTTTTTCAGTTGTTC
TTCCATCTTCAACGAGAAAGATACTTCCCAGAACATAGGTTTGTAAATTT
ATTTGTTAAATAAGATAAAAAGGGTTTGTAGGGTAATCAGTGCTCGTTTT
TGAATTGGTTTTATATTTTTTGTGTTAAGTACTTAGCACCTAGTTTTTGC
TTAAAGTACCTTAAAGTGGGTAAAATTCCTTCCTGGATTACTCATATTTT
TAAGCCTACGACTTCCTGGTTTGAAAAAGGTTGTTTTTATATCACTATTC
ATTGAATTTATAGGGCAAGATTTTATGCAGCTGAAATAGGATCAGCAATT
GGATATCTCCATGGACTTAAGATTATTTACAGGTATAATTCATTATATTT
TATTACAGAGTAATGAATCCTTTGCAAAATGAAACGAAACTGAAAGCACT
ATTTTTCTCCTATAAACATCTGTTCAGATAATTTTGTATCTTGTAGAAAT
ATAAATCCTTTAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGA
AACCAGAAAATATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGAT
TGCTTTTCAATTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAAT
GGAGATTTTTAAGGTCTCCTTTGATAAATTTCTGGCTTACAAGCTTTCCT
TTATTTTTCATACCAAATGGTTCGAATCTGATATTTTTTTTTTTTTTCAT
GTTTTATTTTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGA
AGGCATTGAAAATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGG
TACTTAAGATCATTTGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAACT
TAAAACAATTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATT
TTTCGAGAAATTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAG
ATTGAAGTTTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGC
CCCAGAAGTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGT
GTTTGGGAGCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTAC
TCAAGAGACACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACG
ACTACGAACCAATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTAT
CATTTTCATAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTT
CAAAATGATATTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATA
TTTTTTTCTTATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCC
AAAAAGAAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGT
ATTTGCTTTTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTT
TTATTGGATAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAG
AAAACTTTATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTA
TGTTTGTTATTGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTAT
CAATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCCA
ATGTTGTAGGTTCACCATTAAATTTCTGTATCATTCATCATTCATTTATA
TTCATAATATTTCGCTCGGAAATTCATTCAGTATTTGAAACGTTATGTTA
ACTTTCTGACTTGGTTCCTACAACCCTATGGTTTTTCGGTGTGACTGTTT
ATTTGTTTACTTCAATGGGATAAATTTACGTGGTGATTTGATTNGTTCAG
ATAATTTTGTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAACCTT
CGTAATTTATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAA
AGGTAAATTATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCATGA
TGTCTTTCCCATGAAATAACAATGGAGATTTAAGGTTTCCTTTGATAAAT
TTCTGGCTTACAAAGCTTTCCTTTATTTTTCATACCAAATGGTTCGAATC
TGATATTCTTATTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTATTGA
CAGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCA
ACCTTTTGCGGGACACCAGAGGTACTTAAGATCAATCGAGGTTTTCCTTT
GAGCTGAATGGAAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTAATT
TGAATCATTAGCTTAAAATTATTTTTAGAGAAATTTAACTTGAATCATTT
TGAGGCTTTATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCACAT
CTTTTCTCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTA
CGACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGA
TGTATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGAC
AATATCCTTCACAAACCTCTACGACTACGAACCAATATTTCACAAAGCGC
AAGACACCTTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTTTGT
TTTGACTTTGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATGTTT
TTAATACAATTTTCTAGGAAATGTTTTTTTCTTATTTATTTACATTATCT
TTATCTTTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAA
GCTCAGAAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTTTGT
CTCAAATTAATTAGTTAATTTTTTTGTTGGATAATCTAGAATATTTTCGA
ATTCGGTTTTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGTTAA
GGTTTACTAATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATCCGA
TCACATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAA
AATCGAGCCCACCTATAACCCTAATGTCGTAAGTTCACCATTAAATTTCT
GTATCATTCATCATTCATTTATATTCATAATATTTCGTTCGGAAATTCAT
TCAGTATTTGAAACGTTTGAAACGTTCTGTTAACTTTGTGACTTGGTTCC
TACAACCCTATGGTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATGG
GATAAATTTACGTGGTGGTTTGATTTCGCGAATCGGGGTAGAAATAGAAA
TTATAGAATATAAAATCTTCCCATGAAAATGAACGAAACTTTCTTTTAAA
TCGAATTATTATAGTACAGCACCTGACCCCGAGAATGTAGGTGAAATTTG
AATCAGACCTGAAAGATGTAGATTTGCATTTTAAAAGATATTAAATATTT
TCAACGAAATTTTGAACTCCCAAAATCCTTATTATTGTTCTCTAAGCTAA
ATTCATACTTTAGAAATATACGCTGACAAAAAATTAACAAATATATTAAT
TTCATCGTACTACAAATGAGGAAAAGTAAAAGAAGGACGAAAAGAAGGGA
CAAGAAAGTTGTTTTTATTTTGTAGGTTGAAAATTTTGTGTTGAAATATG
TGAATAATGTAACAACACCCCTGCCTCACAGCCCCGGTGGAACTTTTTCC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AAGGCCCCCAAATTGTAGGTCAACTAACCCCAAAAGTTAGGTCAAACATT
TTCGTCAAAATATCTAACTCAGAACAGTAAATATTGAAATGGACTATTTT
CACCATTTCCTTAGTTCATTAGGACTAAGAAAATACCCTATCATCATAAC
TTAATTCCAATGATTTCGATTTAGAGAGGATTTATTTAAAAAATGTCTCA
GTTCGGGTAATATCCAATCAACTTCCATTCAGATTTTCGTTGGAAAAAAT
TAATTCAAGTTAAAATTTTCTGTCCAGAAATAATCAATAAGATGTAACAG
TATGCTCTGAAACAAATTTTTATGAAGTTGAACTATCGTTAGGGCTACAA
TGCTAAAAAATGAGAAACCTACATTCTCGGGGTTTACTACATTCTCGGGG
TCAGGTGCTGTAACCTTTTTTGGAATATAGCGAGTGTGGCGTGTCCTCGC
GGAGAAAACGATGAAGGTCATCATCATCATCATTGCTCGACCGCAGTCGA
GACTAGACGCTGAAGATAGAAATTTCGAGAAATCCCTGGAATTTAATCCT
GGTGAAAATTTATCCCATTAAAGTATTTTTCAGCTATTTTAAGCTTCTTT
TTCCAAATTCTCATCATGAAACCTTTCAATGTATTTTCAGAGTGGTCAAT
TAGATTTGAAGCATTTCGATCCAGAATTTGTAAGGGAGCCAGTACCTGGT
AAGTTGGCGATCAAAAAACGTTCTAAAATACTATTTGCTTTGGCGATCTC
TTTTTATTCGGAAGCCAGTTTTGAATTCGTCATAAAAAAATTAAATTAGA
ATCGTCTGGTATGTCAAAGAGAGAACGATTATTGGTATTCATTGCAGTAA
TTAAATGGAAACCGCATTTTTTATTTGTTTGTTTACGTTGCGAGTGATGA
GGTAACATCCGCTACGCGCAATGCGGCTTTCTCCTCTCTCATTCGGTCAG
AAAATAATGAGAAGTTACGTTTTCAAAATTTTCTATGCGCTTCTATTAGA
AAGTATATAAACAGCCCGTTTTTTTAACACGATAACATGCTTTATTATCT
TTCTTCTCTAAAAAATACTTCGACCTAACGATACCCTAACAAATTTGATA
CTTCGATCATTGAAACCGCAAATCAGAACTTTAAAGAGTCGAGGTTCTCC
TGTTTTTTTTTGTATTATCCAAATTACAAAAATTCTTCAATTTTCCCTCT
CGTAGCATCTGTGACAAAGGCCGATGGAAGTCAAGTCATTTCTGCAAGTG
TGGATGACCCTGATGAAGCATTTGTTGGATTCACTTACGTACCCCAATCC
GAAGATTTAGTCGAATAAATGCATTCACCTGTGGCTCAATGCTGGCCACA
GTATGGCGAATCATTTCTAGAAAATATAGTTGTTTACTTTCTCTTCGCAA
TATTCATGTCTGGTTGATTTATAACGTCGATGGACATACCGTGAAGCATT
TATGGAGAACTGAACCAAGGTCCATTTTTTCTGTAATATTACAAATTTGT
TAATAAAGAATGAGAGAGTGGTAAGGCAAAAATTTTATTTTACTTTTTTT
TGTACTTTTTGTTTTGATTTAGATAACTTATGAACAATTCAGAATTATAA
AAAACAACCTCTAGCAACTTTTTAATAATAGAGAACAAATTTAAAACAGG
TTGGGAAAATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039268-exon-sc0002054-1575043694:23179..23330TCONS_00039268-exon-sc0002054-1575043694:23179..23330Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:22976..23059TCONS_00039268-exon-sc0002054-1575043694:22976..23059Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:22003..22081TCONS_00039268-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:19289..19364TCONS_00039268-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:18311..18398TCONS_00039268-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:17722..17768TCONS_00039268-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:17424..17481TCONS_00039268-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:17106..17189TCONS_00039268-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:16923..16985TCONS_00039268-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:16655..16723TCONS_00039268-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:16293..16336TCONS_00039268-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:15999..16067TCONS_00039268-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:15802..15838TCONS_00039268-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:15532..15618TCONS_00039268-exon-sc0002054-1575043694:15532..15618Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:15135..15338TCONS_00039268-exon-sc0002054-1575043694:15135..15338Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:14937..14987TCONS_00039268-exon-sc0002054-1575043694:14937..14987Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:14676..14765TCONS_00039268-exon-sc0002054-1575043694:14676..14765Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:10983..11040TCONS_00039268-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1575043694:10011..10475TCONS_00039268-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:23179..23330TCONS_00039268-exon-sc0002054-1510915933:23179..23330Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:22976..23059TCONS_00039268-exon-sc0002054-1510915933:22976..23059Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:22003..22081TCONS_00039268-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:19289..19364TCONS_00039268-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:18311..18398TCONS_00039268-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:17722..17768TCONS_00039268-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:17424..17481TCONS_00039268-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:17106..17189TCONS_00039268-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:16923..16985TCONS_00039268-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:16655..16723TCONS_00039268-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:16293..16336TCONS_00039268-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:15999..16067TCONS_00039268-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:15802..15838TCONS_00039268-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:15532..15618TCONS_00039268-exon-sc0002054-1510915933:15532..15618Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:15135..15338TCONS_00039268-exon-sc0002054-1510915933:15135..15338Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:14937..14987TCONS_00039268-exon-sc0002054-1510915933:14937..14987Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:14676..14765TCONS_00039268-exon-sc0002054-1510915933:14676..14765Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:10983..11040TCONS_00039268-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1510915933:10011..10475TCONS_00039268-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:23179..23330TCONS_00039268-exon-sc0002054-1491911889:23179..23330Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:22976..23059TCONS_00039268-exon-sc0002054-1491911889:22976..23059Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:22003..22081TCONS_00039268-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:19289..19364TCONS_00039268-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:18311..18398TCONS_00039268-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:17722..17768TCONS_00039268-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:17424..17481TCONS_00039268-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:17106..17189TCONS_00039268-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:16923..16985TCONS_00039268-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:16655..16723TCONS_00039268-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:16293..16336TCONS_00039268-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:15999..16067TCONS_00039268-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:15802..15838TCONS_00039268-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:15532..15618TCONS_00039268-exon-sc0002054-1491911889:15532..15618Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:15135..15338TCONS_00039268-exon-sc0002054-1491911889:15135..15338Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:14937..14987TCONS_00039268-exon-sc0002054-1491911889:14937..14987Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:14676..14765TCONS_00039268-exon-sc0002054-1491911889:14676..14765Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:10983..11040TCONS_00039268-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039268-exon-sc0002054-1491911889:10011..10475TCONS_00039268-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..23330 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.31552	7.27999	5.32229	8.91872	26.4608	5.34701	4.57197	23.0771	32.4464	16.1442	39.2358	3.59071	16.5123	7.16084	2.02805	5.15541	6.1468	0.742416	2.79375	3.19365	11.7957	12.8794	1.05554	23.6995	4.08677	14.6063	20.6435	13.1583	4.59455	6.97389
Blast
[Close]
BLAST of TCONS_00039268 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 3 
Query:   96 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1544
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039268 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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