TCONS_00039267 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039267
Unique NameTCONS_00039267
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1897

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039267 ID=TCONS_00039267|Name=TCONS_00039267|organism=Clytia hemisphaerica|type=transcript|length=1897bp
cttgaagttGATTAAATAGAAATGCCAAAAAGCCCAGCTACTCAAAATGT
GCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGACT
CACAGACACTTAGTTCTgatgcaaaaaattcaaagaagtACACTGTTTAC
AAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATA
TAATGAGTTCCATACACTGTATGATAAGGTCAAAAAGGTTTATCCTGAAC
AGCTTCACAACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTT
GACCCAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGATTTTGTAAG
GAAAATATTAGGATTACCAAATATATTCAACCATGCTGACGTCAGAGAAT
TCTTCCAATTGGATAACCCCCGAAATTCTTCAATAAATATTGATGAAGAA
GAAGATGAAGTTGCAGAAGTTGCATCAGAGTTGGAAAATGTTGACCTTGG
GCAATCTGAATCAAAGAAAGCGAAACCAAGTGATTTTGCATTCTTAAAAG
TGATTGGTAAAGGAAGTTTTGGAAAGGTTTTGCTGGCAAAACacaaaact
gaagaaaaattttatGCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAA
AAGAAATGAGGCGCGACATATCATGGCTGAAAGAAATgttcttttgaaga
atgtgAAGCATCCTTTCCTTGTTGGGCTGCACTACTCATTCCAAACTTCA
GATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAGTTGTTCTT
CCATCTTCAACGAGAAAGATACTTCCCAGAACATAGGGCAAGATTTTATG
CAGCTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGATTATT
TACAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGGGTCATGT
TGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAA
CAACATCAACCTTTTGCGGGACACCAGAGTATTTGGCCCCAGAAGTGTTG
CGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGT
CACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAGACACTG
CAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACGaaccaat
atttcacaaagcgCAAGACACCTTTTAGAACAGCTCCTCCAAAAAGAAAA
GAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGACGAGATCCGATCAC
ATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAATC
GAGCCCACCTATAACCCTAATGTCAGTGGTCAATTAGATTTGAAGCATTT
CGATCCAGAATTTGTAAGGGAGCCAGTACCTGCATCTGTGACAAAGGCCG
ATGGAAGTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATTT
GTTGGATTCACTTACGTACCCCAATCCGAAGATTTAGTCGAATAAATGCA
TTCACCTGTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAAA
ATATAGTTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTATA
ACGTCGATGGACATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTCC
ATTTTTTCTGTAATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGTA
aggcaaaaattttattttacttttttttgtactttttgttttgatttaga
tAACTTATGAACAATTCagaattataaaaaacaacCTCTAGCAACTTTTT
AATAATAgagaacaaatttaaaacagGTTGGGAAAATTATTAACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..23322-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039267 ID=TCONS_00039267|Name=TCONS_00039267|organism=Clytia hemisphaerica|type=transcript|length=13312bp|location=Sequence derived from alignment at sc0002054:10011..23322- (Clytia hemisphaerica)
CTTGAAGTTGATTAAATAGAAATGCCAAAAAGCCCAGCTACTCAAAATGT
GCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGACT
CACAGACACTTAGTTCTGATGCAAAAAATTCAAAGAAGTACACTGTAAGT
ATAAGTATTCTAAATAATTTTCATTCAAGTTTTGCATTTTTAACACCTTT
TGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTATATTGAATTGT
TTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGGCAAATGGCCGAAAAT
GGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTATGATAAGGTT
AGAAATTTATGGCTTGGAAACGTTTTGTGCTACAATTGATAATTTTTTGT
ATTTGCACTGTTTCTGTTTACCTTATTCTGTGCTGCTGTGTAATCAAAAA
TTTTCTTCNTGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGT
GTTCCTGACTCACAGACACTTAGTTCTGATGCAAAAAATTCAAAGAAGTA
CACTGTAAGTATAAGTATTCTAAATAATTTTCATTCAAGTTTTGCATTTT
TAACACCTTTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTAT
ATTGAATTGTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGNCACCT
TTTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTATATTGAATT
GTTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGGCAAATGGCCGAAA
ATGGTTTGTTCTTCGAAGATATAATGAGTTCCATACACTGTATGATAAGG
TTAGAAATTTATGGCTTGGAAACGTTTTGTGCTACAATTGATAATTTTTT
GTATTTGCACTGTTTCTGTTTACCTTATTCTGTGCTGCTGTGTAATCAAA
AATTTTCTTCTAGAAATTTCTTGAAAATATTTGTATTAAAAACTCATTCT
GAAAAAGAAAAAGATTAAAGTGGCATTTTGTCATCTATCATAAGTGTAAC
TTAATTACAACTAATGTTTCCTTGATAGGAAAACCAAAACCTTTTAATTG
TGACTCTGTAACTATTCTTGTAGCAAAAAAATGCTCAAACAATATGTATG
CAAATCCTGTGTTAATGCATCTTTTGCTTTTTTAGCTGACAACTTTTTGA
CATGTTTATTTACATATGAATCATTCATTTTTTCAATATAGGTCAAAAAG
GTTTATCCTGAACAGCTTCACAACTTTAAGTTGCCAGGCAAGAAATTGTT
TGGGAACAATTTTGACCCAGGTAAAAATTTTATACGCCCTCTATCAAATT
ATCCCTCAAAATTTTAAATTCAAAAACTGAAATGAAAATTTAAAAGATTA
AAGAGGTATTTCATTTCACTGGAGTTTGTTTACGTGAATAAAAAACAAAG
AGATTGATTTTATCAACTTTGTTTAGATAAGCTTAATTTGATTTGCTCTG
TTTTGATGATAAATCTTATAAACACCTTTGTGTTATAATCTTTGTAGAAC
TTTGCAGAAGAATTTACATCATTTTTTGTTGCATTTTCTCATGTTCTTGT
AATAAAGATATTTTTGTTGTTTTCAATAAAAGAAACTAAAAGTTGCCATC
TGGTGTATCAAAAAGTAATAAATAATGAAAGACTTTCATAAAAAGAGAAA
CAAGTTTGATATATAAAAGTGAAATGTACTTGCTTTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAACTATATTTGAAAAGCAATATCAGCCTGCCTCTTCATATTT
ACATCAAAAAAATATCATACAAGTAAAAGATGTATCCTTATTTCTGTTCC
CATACTTTGATTTGAAATTAAATCGTCTCCTACCTCTATTACTCTGCCAT
CACCATTGGCGTCCTTGTCTCCTTGTGTTCTCGTCATACAAGTCAATTCA
TCTAAGTGAATGAAAATAAGCACATATCTATCCTTCCTTGCTGTGAAGAA
AGTGCTTGACAAATAATTCAGTCATGGTTCTAATGCTTTTATCACTCCGT
TCTTACAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGATTTTGTAA
GGAAAATATTAGGATTACCAAATATATTCAACCAGTAAGTAATGATGAGA
GTTGCTTGATTTTTCATGTTTTTCTACAACTCCTTATAAAATAAGATTAA
TACTATCAAAATTATTTTTTTGTCAAACTAATTTAAATGTGAGATGGTTT
TCTTATGTTAATGCTCTCTTCCCATAGCGTCAGCCCCCCCTGGAAACTGG
GGAAGGAAATCACTCTAAAATATTCCCGAAAAACTTAATGGTTGGCTTCA
ATTACTTAATTTAAAGTTCATGAAGCTGAAAAATTTTGTCTGCGGGGNAA
ATCACTCTAAAATATTCCCGAAAAACTTAATGGTTGGCTTCAATTACTTA
ATTTAAAGTTCATGAAGCTGAAAAATTTTGTCTGCGGGGGAATATTTTAA
TATGAAATATTCAAAATATGTAAAATATACTATCTTCTATCTTTTAATAT
TTTACTTGGCTCTGCAACATCGATCACAGACACAGACAAAACTATCTTCT
ACTTTTTTTTCCTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATATGAAATATACTATCTTCTATCTTTTAATATTTTACTTGGCTCTGCA
ACATCGATCACAGACACAGACAAAACTATCTTCTACTTTTTTTTCCTGGG
ACAAATTTTAGAAAGTGTAGATGGTGGCAAATCTTGAGAGCTATAAACAA
ATTTTTAAATTATTGGGGGACTTAACTTTTTGTCTGGGACCTAAACACTG
GCTGAGGATATGGCTCTTCCACGTTATAGGTGAAAAATACCAAAAATTAA
AGAATTTGTTAGAAAGTTGTTCTCAATCAGGTTTCAATCAAAATAAGAGT
TCTATCTTTCAAAAGGTTAACCTTCCAGTGCATTCTTAAAAAAAACAGTT
TAATGACCTGCTTCATTTTCATAGTGCTGACGTCAGAGAATTCTTCCAAT
TGGATAACCCCCGAAATTCTTCAATAAATATTGATGAAGAAGAAGATGAA
GTTGCAGAAGTTGTAAGAATCCATTTTTGTTCGCATTGTATGATGTCGGT
TATGCCAAATTATACAAACCACCAAAGAAATTCTGAAATTCTGAAAAAAG
AGCCATTTAAAAAAAGTTGGAAATGGCAGCAGTGTACAAGATACAAACTT
TCCCTTTTTTGATAAAATCTAGTTTCACCAGCCATTAATATTTTGTATTA
CTTTATACCCTCAAGAAAGCTTTTTTATAAAACTAAAAGCTAAAAGCTTT
TTAAATTTGTTTTGGGAAATAGGCTCTCAAGAACTAAAGCATAATTTGAA
AAAATATATAAAATCCCAGCATGTTGTACTTTCTTTCTATTGATAAACCT
GTGTTGTCTTGATCTGAAAATCTATTCAAAATAAAACTTTTCTTTTTCAA
AATGTTAGAGACTTTACTAATGAAAACTTTTTCTTCAAATATGGCTTATT
TTCAGGTACTTATAATAAATTTTTTTAATTTTCTTAAATCTAAAATCAAA
CACTGTATTTGTGTGGTCTGAGACTCGTTTTTGATACCTTCTTATCTTTC
TAAGGCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATCAAAGA
AGTAAGTTTATTAAAGTCCATTTAAAGGAAATTATTCCAAAAACGAACTT
TCATATTTGCCTCTCTTGAGTTTGCATGGATTTATCTTTCAGAAACTAAT
TTCGTTTTCAGTGAGCCTACCTTTGCTTTTATCCAATTTTAAGGTGTTTG
TAATTGAGTTTTTCAATTGATTTGTGAAATATCTGTCATCTTACTCGTTA
ATTTCACTGATAATGATGAAATATTCATCTTACAACTTCAGAGCGAAACC
AAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAGGAAGTTTTGGAAAGG
TAATAACTCTGAACAGTAACATTTTTTCTTTGGAAAATATAAGATATCCT
TGGGTTTTGATTTACCAAAATGTCTAAATTTATGTCCCCTTTGATTTAGT
TTTCAATCATTCCCCTCGCTTTGATTTAGTGTTGTTGGAAATGATGAGTG
TTTAATTGATAAAAGTACAATGATCAATGTTTGGAAGAAATCTAAACCAT
AAAGTTTCAGCAAGTTTAACTTTTTTGATTTAGGTTTTGCTGGCAAAACA
CAAAACTGAAGAAAAATTTTATGCAATCAAAGTCCTGCACAAAGCAGCTA
TTCGTAAAAGAAATGAGGTATGATACTTACCTCATTGTTTTTTCAGTTTT
TTTTTAAATTGGAACAAGATCATTGCATTTGCAAAGACATAATGTAAAAT
AAAGTAATATTTTGAATTCGATGGATACTTTTTACAGGCGCGACATATCA
TGGCTGAAAGAAATGTTCTTTTGAAGAATGTGAAGCATCCTTTCCTTGTT
GTAAGTATTTCATGCAAAATTAACGATTGAGGATTCATTTTCATCTCCAA
TTCAATACCGATGCATAGAATATTTTATTCAAGAAAACCTTCGATAATGC
AATGAAATGTGATTTGATGATGTGATTTTTCCTCATNAACCTTCGATAAT
GCAATGAAATGTGATTTGATGATGTGATTTTTCCTCATCTTCTTTATAGG
GGCTGCACTACTCATTCCAAACTTCAGATAAATTGTATTTCGTTTTGGAT
TATGTAAATGGTGGAGAGGTAAAATCTTACAACTCTTAACCAATTTTTTG
ATAAATTGACTTCAAAGAAGTTTTGCTACTGAGGAGCCTTAGGGAGTTTT
TATCATTTACAGGAGGAGATAACGAAGCCTCAAGGTCAGCTGGTCAAATT
AAAATCAAAGTGCATGAAGTATAAGGAAAACTGTCTCAGCTATGTACTTT
ATACCAGAAGAAGTCCCAAGAAATACAGGGGCGATAAGGCTATTAGAAAT
TCAAGGACTAGTAAGCGACGTGTTGAACGTGTTGCGTTTTCTTTCAATCT
GATTTACATTCTCATTTTTCTTATCCTTTTTTTCAGTTGTTCTTCCATCT
TCAACGAGAAAGATACTTCCCAGAACATAGGTTTGTAAATTTATTTGTTA
AATAAGATAAAAAGGGTTTGTAGGGTAATCAGTGCTCGTTTTTGAATTGG
TTTTATATTTTTTGTGTTAAGTACTTAGCACCTAGTTTTTGCTTAAAGTA
CCTTAAAGTGGGTAAAATTCCTTCCTGGATTACTCATATTTTTAAGCCTA
CGACTTCCTGGTTTGAAAAAGGTTGTTTTTATATCACTATTCATTGAATT
TATAGGGCAAGATTTTATGCAGCTGAAATAGGATCAGCAATTGGATATCT
CCATGGACTTAAGATTATTTACAGGTATAATTCATTATATTTTATTACAG
AGTAATGAATCCTTTGCAAAATGAAACGAAACTGAAAGCACTATTTTTCT
CCTATAAACATCTGTTCAGATAATTTTGTATCTTGTAGAAATATAAATCC
TTTAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGAAACCAGAA
AATATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGATTGCTTTTC
AATTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAATGGAGATTT
TTAAGGTCTCCTTTGATAAATTTCTGGCTTACAAGCTTTCCTTTATTTTT
CATACCAAATGGTTCGAATCTGATATTTTTTTTTTTTTTCATGTTTTATT
TTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTG
AAAATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGGTACTTAAG
ATCATTTGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAACTTAAAACAA
TTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATTTTTCGAGA
AATTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAGATTGAAGT
TTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGCCCCAGAAG
TGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGGA
GCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAGA
CACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACGAA
CCAATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTATCATTTTCA
TAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTCAAAATGA
TATTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATATTTTTTTC
TTATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCCAAAAAGAA
AAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTATTTGCTT
TTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTTTTATTGGA
TAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAGAAAACTTT
ATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTATGTTTGTT
ATTGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTATCAATTTCC
ATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCCAATGTTGTA
GGTTCACCATTAAATTTCTGTATCATTCATCATTCATTTATATTCATAAT
ATTTCGCTCGGAAATTCATTCAGTATTTGAAACGTTATGTTAACTTTCTG
ACTTGGTTCCTACAACCCTATGGTTTTTCGGTGTGACTGTTTATTTGTTT
ACTTCAATGGGATAAATTTACGTGGTGATTTGATTNGTTCAGATAATTTT
GTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAACCTTCGTAATTT
ATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGGTAAAT
TATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCATGATGTCTTTC
CCATGAAATAACAATGGAGATTTAAGGTTTCCTTTGATAAATTTCTGGCT
TACAAAGCTTTCCTTTATTTTTCATACCAAATGGTTCGAATCTGATATTC
TTATTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTATTGACAGATTTT
GGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACCTTTTG
CGGGACACCAGAGGTACTTAAGATCAATCGAGGTTTTCCTTTGAGCTGAA
TGGAAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTAATTTGAATCAT
TAGCTTAAAATTATTTTTAGAGAAATTTAACTTGAATCATTTTGAGGCTT
TATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCACATCTTTTCTC
TGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACGACAAAT
CAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATGTATGGC
TTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAATATCCT
TCACAAACCTCTACGACTACGAACCAATATTTCACAAAGCGCAAGACACC
TTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTTTGTTTTGACTT
TGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATGTTTTTAATACA
ATTTTCTAGGAAATGTTTTTTTCTTATTTATTTACATTATCTTTATCTTT
GGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGCTCAGAA
GCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTTTGTCTCAAATT
AATTAGTTAATTTTTTTGTTGGATAATCTAGAATATTTTCGAATTCGGTT
TTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGTTAAGGTTTACT
AATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATCCGATCACATCC
ATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAATCGAGC
CCACCTATAACCCTAATGTCGTAAGTTCACCATTAAATTTCTGTATCATT
CATCATTCATTTATATTCATAATATTTCGTTCGGAAATTCATTCAGTATT
TGAAACGTTTGAAACGTTCTGTTAACTTTGTGACTTGGTTCCTACAACCC
TATGGTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATGGGATAAATT
TACGTGGTGGTTTGATTTCGCGAATCGGGGTAGAAATAGAAATTATAGAA
TATAAAATCTTCCCATGAAAATGAACGAAACTTTCTTTTAAATCGAATTA
TTATAGTACAGCACCTGACCCCGAGAATGTAGGTGAAATTTGAATCAGAC
CTGAAAGATGTAGATTTGCATTTTAAAAGATATTAAATATTTTCAACGAA
ATTTTGAACTCCCAAAATCCTTATTATTGTTCTCTAAGCTAAATTCATAC
TTTAGAAATATACGCTGACAAAAAATTAACAAATATATTAATTTCATCGT
ACTACAAATGAGGAAAAGTAAAAGAAGGACGAAAAGAAGGGACAAGAAAG
TTGTTTTTATTTTGTAGGTTGAAAATTTTGTGTTGAAATATGTGAATAAT
GTAACAACACCCCTGCCTCACAGCCCCGGTGGAACTTTTTCCCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGCCCC
CAAATTGTAGGTCAACTAACCCCAAAAGTTAGGTCAAACATTTTCGTCAA
AATATCTAACTCAGAACAGTAAATATTGAAATGGACTATTTTCACCATTT
CCTTAGTTCATTAGGACTAAGAAAATACCCTATCATCATAACTTAATTCC
AATGATTTCGATTTAGAGAGGATTTATTTAAAAAATGTCTCAGTTCGGGT
AATATCCAATCAACTTCCATTCAGATTTTCGTTGGAAAAAATTAATTCAA
GTTAAAATTTTCTGTCCAGAAATAATCAATAAGATGTAACAGTATGCTCT
GAAACAAATTTTTATGAAGTTGAACTATCGTTAGGGCTACAATGCTAAAA
AATGAGAAACCTACATTCTCGGGGTTTACTACATTCTCGGGGTCAGGTGC
TGTAACCTTTTTTGGAATATAGCGAGTGTGGCGTGTCCTCGCGGAGAAAA
CGATGAAGGTCATCATCATCATCATTGCTCGACCGCAGTCGAGACTAGAC
GCTGAAGATAGAAATTTCGAGAAATCCCTGGAATTTAATCCTGGTGAAAA
TTTATCCCATTAAAGTATTTTTCAGCTATTTTAAGCTTCTTTTTCCAAAT
TCTCATCATGAAACCTTTCAATGTATTTTCAGAGTGGTCAATTAGATTTG
AAGCATTTCGATCCAGAATTTGTAAGGGAGCCAGTACCTGGTAAGTTGGC
GATCAAAAAACGTTCTAAAATACTATTTGCTTTGGCGATCTCTTTTTATT
CGGAAGCCAGTTTTGAATTCGTCATAAAAAAATTAAATTAGAATCGTCTG
GTATGTCAAAGAGAGAACGATTATTGGTATTCATTGCAGTAATTAAATGG
AAACCGCATTTTTTATTTGTTTGTTTACGTTGCGAGTGATGAGGTAACAT
CCGCTACGCGCAATGCGGCTTTCTCCTCTCTCATTCGGTCAGAAAATAAT
GAGAAGTTACGTTTTCAAAATTTTCTATGCGCTTCTATTAGAAAGTATAT
AAACAGCCCGTTTTTTTAACACGATAACATGCTTTATTATCTTTCTTCTC
TAAAAAATACTTCGACCTAACGATACCCTAACAAATTTGATACTTCGATC
ATTGAAACCGCAAATCAGAACTTTAAAGAGTCGAGGTTCTCCTGTTTTTT
TTTGTATTATCCAAATTACAAAAATTCTTCAATTTTCCCTCTCGTAGCAT
CTGTGACAAAGGCCGATGGAAGTCAAGTCATTTCTGCAAGTGTGGATGAC
CCTGATGAAGCATTTGTTGGATTCACTTACGTACCCCAATCCGAAGATTT
AGTCGAATAAATGCATTCACCTGTGGCTCAATGCTGGCCACAGTATGGCG
AATCATTTCTAGAAAATATAGTTGTTTACTTTCTCTTCGCAATATTCATG
TCTGGTTGATTTATAACGTCGATGGACATACCGTGAAGCATTTATGGAGA
ACTGAACCAAGGTCCATTTTTTCTGTAATATTACAAATTTGTTAATAAAG
AATGAGAGAGTGGTAAGGCAAAAATTTTATTTTACTTTTTTTTGTACTTT
TTGTTTTGATTTAGATAACTTATGAACAATTCAGAATTATAAAAAACAAC
CTCTAGCAACTTTTTAATAATAGAGAACAAATTTAAAACAGGTTGGGAAA
ATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039267-exon-sc0002054-1575043694:23179..23322TCONS_00039267-exon-sc0002054-1575043694:23179..23322Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:22474..22557TCONS_00039267-exon-sc0002054-1575043694:22474..22557Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:22003..22081TCONS_00039267-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:19289..19364TCONS_00039267-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:18311..18398TCONS_00039267-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:17722..17768TCONS_00039267-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:17424..17481TCONS_00039267-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:17106..17189TCONS_00039267-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:16923..16985TCONS_00039267-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:16655..16723TCONS_00039267-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:16293..16336TCONS_00039267-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:15999..16067TCONS_00039267-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:15802..15838TCONS_00039267-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:15532..15618TCONS_00039267-exon-sc0002054-1575043694:15532..15618Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:13712..13915TCONS_00039267-exon-sc0002054-1575043694:13712..13915Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:13514..13564TCONS_00039267-exon-sc0002054-1575043694:13514..13564Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:13253..13342TCONS_00039267-exon-sc0002054-1575043694:13253..13342Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:10983..11040TCONS_00039267-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1575043694:10011..10475TCONS_00039267-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:23179..23322TCONS_00039267-exon-sc0002054-1510915933:23179..23322Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:22474..22557TCONS_00039267-exon-sc0002054-1510915933:22474..22557Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:22003..22081TCONS_00039267-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:19289..19364TCONS_00039267-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:18311..18398TCONS_00039267-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:17722..17768TCONS_00039267-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:17424..17481TCONS_00039267-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:17106..17189TCONS_00039267-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:16923..16985TCONS_00039267-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:16655..16723TCONS_00039267-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:16293..16336TCONS_00039267-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:15999..16067TCONS_00039267-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:15802..15838TCONS_00039267-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:15532..15618TCONS_00039267-exon-sc0002054-1510915933:15532..15618Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:13712..13915TCONS_00039267-exon-sc0002054-1510915933:13712..13915Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:13514..13564TCONS_00039267-exon-sc0002054-1510915933:13514..13564Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:13253..13342TCONS_00039267-exon-sc0002054-1510915933:13253..13342Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:10983..11040TCONS_00039267-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1510915933:10011..10475TCONS_00039267-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:23179..23322TCONS_00039267-exon-sc0002054-1491911889:23179..23322Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:22474..22557TCONS_00039267-exon-sc0002054-1491911889:22474..22557Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:22003..22081TCONS_00039267-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:19289..19364TCONS_00039267-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:18311..18398TCONS_00039267-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:17722..17768TCONS_00039267-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:17424..17481TCONS_00039267-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:17106..17189TCONS_00039267-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:16923..16985TCONS_00039267-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:16655..16723TCONS_00039267-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:16293..16336TCONS_00039267-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:15999..16067TCONS_00039267-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:15802..15838TCONS_00039267-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:15532..15618TCONS_00039267-exon-sc0002054-1491911889:15532..15618Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:13712..13915TCONS_00039267-exon-sc0002054-1491911889:13712..13915Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:13514..13564TCONS_00039267-exon-sc0002054-1491911889:13514..13564Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:13253..13342TCONS_00039267-exon-sc0002054-1491911889:13253..13342Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:10983..11040TCONS_00039267-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039267-exon-sc0002054-1491911889:10011..10475TCONS_00039267-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..23322 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.2112	9.57633	17.0744	7.46725	7.46445e-07	4.93423e-10	0.021758	4.7391e-05	39.7477	61.3587	42.0257	25.6401	12.7863	4.16682	16.8101	43.7086	12.4962	19.5659	13.8885	23.045	5.14333	17.2373	10.6425	3.86144	0	0	20.1905	21.2476	18.8509	11.7789
Blast
[Close]
BLAST of TCONS_00039267 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 1 
Query:   88 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1536
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039267 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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