TCONS_00039264 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039264
Unique NameTCONS_00039264
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1835

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039264 ID=TCONS_00039264|Name=TCONS_00039264|organism=Clytia hemisphaerica|type=transcript|length=1835bp
TAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTA
GTTCTgatgcaaaaaattcaaagaagtACACTGTTTACAAGGTAGCTGTT
GAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCA
TACACTGTATGATAAGGTCAAAAAGGTTTATCCTGAACAGCTTCACAACT
TTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGATTTC
ATTAAAATGCGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGG
ATTACCAAATATATTCAACCATGCTGACGTCAGAGAATTCTTCCAATTGG
ATAACCCCCGAAATTCTTCAATAAATATTGATGAAGAAGAAGATGAAGTT
GCAGAAGTTGCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATC
AAAGAAAGCGAAACCAAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAG
GAAGTTTTGGAAAGGTTTTGCTGGCAAAACacaaaactgaagaaaaattt
tatGCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGC
GCGACATATCATGGCTGAAAGAAATgttcttttgaagaatgtgAAGCATC
CTTTCCTTGTTGGGCTGCACTACTCATTCCAAACTTCAGATAAATTGTAT
TTCGTTTTGGATTATGTAAATGGTGGAGAGTTGTTCTTCCATCTTCAACG
AGAAAGATACTTCCCAGAACATAGGGCAAGATTTTATGCAGCTGAAATAG
GATCAGCAATTGGATATCTCCATGGACTTAAGATTATTTACAGGGACCTG
AAACCAGAAAATATTCTATTGGACTCAAAGGGTCATGTTGTATTGACAGA
TTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACCT
TTTGCGGGACACCAGAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCC
TACGACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAAT
GATGTATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACG
ACAATATCCTTCACAAACCTCTACGACTACGaaccaatatttcacaaagc
gCAAGACACCTTTTAGAACAGCTCCTCCAAAAAGAAAAGAGTAAACGTTT
AGGAAGCTCAGAAGCTGATTTCGACGAGATCCGATCACATCCATTCTTCC
GTAGTATCAATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTAT
AACCCTAATGTCAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATT
TGTAAGGGAGCCAGTACCTGCATCTGTGACAAAGGCCGATGGAAGTCAAG
TCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATTTGTTGGATTCACT
TACGTACCCCAATCCGAAGATTTAGTCGAATAAATGCATTCACCTGTGGC
TCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAAAATATAGTTGTTT
ACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTATAACGTCGATGGAC
ATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTCCATTTTTTCTGTA
ATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGTAaggcaaaaattt
tattttacttttttttgtactttttgttttgatttagatAACTTATGAAC
AATTCagaattataaaaaacaacCTCTAGCAACTTTTTAATAATAgagaa
caaatttaaaacagGTTGGGAAAATTATTAACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..22850-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039264 ID=TCONS_00039264|Name=TCONS_00039264|organism=Clytia hemisphaerica|type=transcript|length=12840bp|location=Sequence derived from alignment at sc0002054:10011..22850- (Clytia hemisphaerica)
TAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTA
GTTCTGATGCAAAAAATTCAAAGAAGTACACTGTAAGTATAAGTATTCTA
AATAATTTTCATTCAAGTTTTGCATTTTTAACACCTTTTGTCGATTTGTC
AAATTATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAA
GGTTTACAAGGTAGCTGTTGAGNCACCTTTTGTCGATTTGTCAAATTATT
TGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGGTTTACA
AGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATAT
AATGAGTTCCATACACTGTATGATAAGGTTAGAAATTTATGGCTTGGAAA
CGTTTTGTGCTACAATTGATAATTTTTTGTATTTGCACTGTTTCTGTTTA
CCTTATTCTGTGCTGCTGTGTAATCAAAAATTTTCTTCTAGAAATTTCTT
GAAAATATTTGTATTAAAAACTCATTCTGAAAAAGAAAAAGATTAAAGTG
GCATTTTGTCATCTATCATAAGTGTAACTTAATTACAACTAATGTTTCCT
TGATAGGAAAACCAAAACCTTTTAATTGTGACTCTGTAACTATTCTTGTA
GCAAAAAAATGCTCAAACAATATGTATGCAAATCCTGTGTTAATGCATCT
TTTGCTTTTTTAGCTGACAACTTTTTGACATGTTTATTTACATATGAATC
ATTCATTTTTTCAATATAGGTCAAAAAGGTTTATCCTGAACAGCTTCACA
ACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGGT
AAAAATTTTATACGCCCTCTATCAAATTATCCCTCAAAATTTTAAATTCA
AAAACTGAAATGAAAATTTAAAAGATTAAAGAGGTATTTCATTTCACTGG
AGTTTGTTTACGTGAATAAAAAACAAAGAGATTGATTTTATCAACTTTGT
TTAGATAAGCTTAATTTGATTTGCTCTGTTTTGATGATAAATCTTATAAA
CACCTTTGTGTTATAATCTTTGTAGAACTTTGCAGAAGAATTTACATCAT
TTTTTGTTGCATTTTCTCATGTTCTTGTAATAAAGATATTTTTGTTGTTT
TCAATAAAAGAAACTAAAAGTTGCCATCTGGTGTATCAAAAAGTAATAAA
TAATGAAAGACTTTCATAAAAAGAGAAACAAGTTTGATATATAAAAGTGA
AATGTACTTGCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTATATTTGAAA
AGCAATATCAGCCTGCCTCTTCATATTTACATCAAAAAAATATCATACAA
GTAAAAGATGTATCCTTATTTCTGTTCCCATACTTTGATTTGAAATTAAA
TCGTCTCCTACCTCTATTACTCTGCCATCACCATTGGCGTCCTTGTCTCC
TTGTGTTCTCGTCATACAAGTCAATTCATCTAAGTGAATGAAAATAAGCA
CATATCTATCCTTCCTTGCTGTGAAGAAAGTGCTTGACAAATAATTCAGT
CATGGTTCTAATGCTTTTATCACTCCGTTCTTACAGATTTCATTAAAATG
CGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATTACCAAA
TATATTCAACCAGTAAGTAATGATGAGAGTTGCTTGATTTTTCATGTTTT
TCTACAACTCCTTATAAAATAAGATTAATACTATCAAAATTATTTTTTTG
TCAAACTAATTTAAATGTGAGATGGTTTTCTTATGTTAATGCTCTCTTCC
CATAGCGTCAGCCCCCCCTGGAAACTGGGGAAGGAAATCACTCTAAAATA
TTCCCGAAAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCATG
AAGCTGAAAAATTTTGTCTGCGGGGNAAATCACTCTAAAATATTCCCGAA
AAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCATGAAGCTGAA
AAATTTTGTCTGCGGGGGAATATTTTAATATGAAATATTCAAAATATGTA
AAATATACTATCTTCTATCTTTTAATATTTTACTTGGCTCTGCAACATCG
ATCACAGACACAGACAAAACTATCTTCTACTTTTTTTTCCTGGGANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGAAATATACTATCTTCT
ATCTTTTAATATTTTACTTGGCTCTGCAACATCGATCACAGACACAGACA
AAACTATCTTCTACTTTTTTTTCCTGGGACAAATTTTAGAAAGTGTAGAT
GGTGGCAAATCTTGAGAGCTATAAACAAATTTTTAAATTATTGGGGGACT
TAACTTTTTGTCTGGGACCTAAACACTGGCTGAGGATATGGCTCTTCCAC
GTTATAGGTGAAAAATACCAAAAATTAAAGAATTTGTTAGAAAGTTGTTC
TCAATCAGGTTTCAATCAAAATAAGAGTTCTATCTTTCAAAAGGTTAACC
TTCCAGTGCATTCTTAAAAAAAACAGTTTAATGACCTGCTTCATTTTCAT
AGTGCTGACGTCAGAGAATTCTTCCAATTGGATAACCCCCGAAATTCTTC
AATAAATATTGATGAAGAAGAAGATGAAGTTGCAGAAGTTGTAAGAATCC
ATTTTTGTTCGCATTGTATGATGTCGGTTATGCCAAATTATACAAACCAC
CAAAGAAATTCTGAAATTCTGAAAAAAGAGCCATTTAAAAAAAGTTGGAA
ATGGCAGCAGTGTACAAGATACAAACTTTCCCTTTTTTGATAAAATCTAG
TTTCACCAGCCATTAATATTTTGTATTACTTTATACCCTCAAGAAAGCTT
TTTTATAAAACTAAAAGCTAAAAGCTTTTTAAATTTGTTTTGGGAAATAG
GCTCTCAAGAACTAAAGCATAATTTGAAAAAATATATAAAATCCCAGCAT
GTTGTACTTTCTTTCTATTGATAAACCTGTGTTGTCTTGATCTGAAAATC
TATTCAAAATAAAACTTTTCTTTTTCAAAATGTTAGAGACTTTACTAATG
AAAACTTTTTCTTCAAATATGGCTTATTTTCAGGTACTTATAATAAATTT
TTTTAATTTTCTTAAATCTAAAATCAAACACTGTATTTGTGTGGTCTGAG
ACTCGTTTTTGATACCTTCTTATCTTTCTAAGGCATCAGAGTTGGAAAAT
GTTGACCTTGGGCAATCTGAATCAAAGAAGTAAGTTTATTAAAGTCCATT
TAAAGGAAATTATTCCAAAAACGAACTTTCATATTTGCCTCTCTTGAGTT
TGCATGGATTTATCTTTCAGAAACTAATTTCGTTTTCAGTGAGCCTACCT
TTGCTTTTATCCAATTTTAAGGTGTTTGTAATTGAGTTTTTCAATTGATT
TGTGAAATATCTGTCATCTTACTCGTTAATTTCACTGATAATGATGAAAT
ATTCATCTTACAACTTCAGAGCGAAACCAAGTGATTTTGCATTCTTAAAA
GTGATTGGTAAAGGAAGTTTTGGAAAGGTAATAACTCTGAACAGTAACAT
TTTTTCTTTGGAAAATATAAGATATCCTTGGGTTTTGATTTACCAAAATG
TCTAAATTTATGTCCCCTTTGATTTAGTTTTCAATCATTCCCCTCGCTTT
GATTTAGTGTTGTTGGAAATGATGAGTGTTTAATTGATAAAAGTACAATG
ATCAATGTTTGGAAGAAATCTAAACCATAAAGTTTCAGCAAGTTTAACTT
TTTTGATTTAGGTTTTGCTGGCAAAACACAAAACTGAAGAAAAATTTTAT
GCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGTATG
ATACTTACCTCATTGTTTTTTCAGTTTTTTTTTAAATTGGAACAAGATCA
TTGCATTTGCAAAGACATAATGTAAAATAAAGTAATATTTTGAATTCGAT
GGATACTTTTTACAGGCGCGACATATCATGGCTGAAAGAAATGTTCTTTT
GAAGAATGTGAAGCATCCTTTCCTTGTTGTAAGTATTTCATGCAAAATTA
ACGATTGAGGATTCATTTTCATCTCCAATTCAATACCGATGCATAGAATA
TTTTATTCAAGAAAACCTTCGATAATGCAATGAAATGTGATTTGATGATG
TGATTTTTCCTCATNAACCTTCGATAATGCAATGAAATGTGATTTGATGA
TGTGATTTTTCCTCATCTTCTTTATAGGGGCTGCACTACTCATTCCAAAC
TTCAGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAGGTAA
AATCTTACAACTCTTAACCAATTTTTTGATAAATTGACTTCAAAGAAGTT
TTGCTACTGAGGAGCCTTAGGGAGTTTTTATCATTTACAGGAGGAGATAA
CGAAGCCTCAAGGTCAGCTGGTCAAATTAAAATCAAAGTGCATGAAGTAT
AAGGAAAACTGTCTCAGCTATGTACTTTATACCAGAAGAAGTCCCAAGAA
ATACAGGGGCGATAAGGCTATTAGAAATTCAAGGACTAGTAAGCGACGTG
TTGAACGTGTTGCGTTTTCTTTCAATCTGATTTACATTCTCATTTTTCTT
ATCCTTTTTTTCAGTTGTTCTTCCATCTTCAACGAGAAAGATACTTCCCA
GAACATAGGTTTGTAAATTTATTTGTTAAATAAGATAAAAAGGGTTTGTA
GGGTAATCAGTGCTCGTTTTTGAATTGGTTTTATATTTTTTGTGTTAAGT
ACTTAGCACCTAGTTTTTGCTTAAAGTACCTTAAAGTGGGTAAAATTCCT
TCCTGGATTACTCATATTTTTAAGCCTACGACTTCCTGGTTTGAAAAAGG
TTGTTTTTATATCACTATTCATTGAATTTATAGGGCAAGATTTTATGCAG
CTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGATTATTTAC
AGGTATAATTCATTATATTTTATTACAGAGTAATGAATCCTTTGCAAAAT
GAAACGAAACTGAAAGCACTATTTTTCTCCTATAAACATCTGTTCAGATA
ATTTTGTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAACCTTCGT
AATTTATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGG
TAAATTATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCATGATGT
CTTTCCCATGAAATAACAATGGAGATTTTTAAGGTCTCCTTTGATAAATT
TCTGGCTTACAAGCTTTCCTTTATTTTTCATACCAAATGGTTCGAATCTG
ATATTTTTTTTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTATTGACA
GATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAAC
CTTTTGCGGGACACCAGAGGTACTTAAGATCATTTGAGGTTTTCCTTTGA
GCTGAATGGAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTAATTTGA
ATCATTAGCTTAAAATTATTTTTCGAGAAATTTAACTTGAATCATTTTGA
GGCTTTATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCACATCTT
TTCTCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACGA
CAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATGT
ATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAAT
ATCCTTCACAAACCTCTACGACTACGAACCAATATTTCACAAAGCGCAAG
ACACCTTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTTTGTTTT
GACTTTGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATGTTTTTA
ATACAATTTTCTAGGAAATATTTTTTTCTTATTTATTTACATTATCTTTA
TCTTTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGCT
CAGAAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTTTGTCTC
AAATTAATTAGTTAATTTTTTTATTGGATAATCTAGAATATTTTCGAATT
CGGTTTTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGTTAAGGT
TTACTAATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATCCGATCA
CATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAAT
CGAGCCCACCTATAACCCCAATGTTGTAGGTTCACCATTAAATTTCTGTA
TCATTCATCATTCATTTATATTCATAATATTTCGCTCGGAAATTCATTCA
GTATTTGAAACGTTATGTTAACTTTCTGACTTGGTTCCTACAACCCTATG
GTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATGGGATAAATTTACG
TGGTGATTTGATTNGTTCAGATAATTTTGTATCTTGTAGAAATATAAATC
CTTTAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGAAACCAGA
AAATATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGATTGCTTTT
CAATTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAATGGAGATT
TAAGGTTTCCTTTGATAAATTTCTGGCTTACAAAGCTTTCCTTTATTTTT
CATACCAAATGGTTCGAATCTGATATTCTTATTTTTTTTCATGTTTTATT
TTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTG
AAAATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGGTACTTAAG
ATCAATCGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAAACTTAAAACA
ATTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATTTTTAGAG
AAATTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAGATTGAAG
TTTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGCCCCAGAA
GTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGG
AGCTGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAG
ACACTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACGA
ACCAATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTATCATTTTC
ATAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTCAAAATG
ATATTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATGTTTTTTT
CTTATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCCAAAAAGA
AAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTATTTGCT
TTTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTTTTGTTGG
ATAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAGAAAACTT
TATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTATGTTTGT
TATTGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTATCAATTTC
CATGATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCTAATGTCGT
AAGTTCACCATTAAATTTCTGTATCATTCATCATTCATTTATATTCATAA
TATTTCGTTCGGAAATTCATTCAGTATTTGAAACGTTTGAAACGTTCTGT
TAACTTTGTGACTTGGTTCCTACAACCCTATGGTTTTTCGGTGTGACTGT
TTATTTGTTTACTTCAATGGGATAAATTTACGTGGTGGTTTGATTTCGCG
AATCGGGGTAGAAATAGAAATTATAGAATATAAAATCTTCCCATGAAAAT
GAACGAAACTTTCTTTTAAATCGAATTATTATAGTACAGCACCTGACCCC
GAGAATGTAGGTGAAATTTGAATCAGACCTGAAAGATGTAGATTTGCATT
TTAAAAGATATTAAATATTTTCAACGAAATTTTGAACTCCCAAAATCCTT
ATTATTGTTCTCTAAGCTAAATTCATACTTTAGAAATATACGCTGACAAA
AAATTAACAAATATATTAATTTCATCGTACTACAAATGAGGAAAAGTAAA
AGAAGGACGAAAAGAAGGGACAAGAAAGTTGTTTTTATTTTGTAGGTTGA
AAATTTTGTGTTGAAATATGTGAATAATGTAACAACACCCCTGCCTCACA
GCCCCGGTGGAACTTTTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAAAGGCCCCCAAATTGTAGGTCAACTAACCC
CAAAAGTTAGGTCAAACATTTTCGTCAAAATATCTAACTCAGAACAGTAA
ATATTGAAATGGACTATTTTCACCATTTCCTTAGTTCATTAGGACTAAGA
AAATACCCTATCATCATAACTTAATTCCAATGATTTCGATTTAGAGAGGA
TTTATTTAAAAAATGTCTCAGTTCGGGTAATATCCAATCAACTTCCATTC
AGATTTTCGTTGGAAAAAATTAATTCAAGTTAAAATTTTCTGTCCAGAAA
TAATCAATAAGATGTAACAGTATGCTCTGAAACAAATTTTTATGAAGTTG
AACTATCGTTAGGGCTACAATGCTAAAAAATGAGAAACCTACATTCTCGG
GGTTTACTACATTCTCGGGGTCAGGTGCTGTAACCTTTTTTGGAATATAG
CGAGTGTGGCGTGTCCTCGCGGAGAAAACGATGAAGGTCATCATCATCAT
CATTGCTCGACCGCAGTCGAGACTAGACGCTGAAGATAGAAATTTCGAGA
AATCCCTGGAATTTAATCCTGGTGAAAATTTATCCCATTAAAGTATTTTT
CAGCTATTTTAAGCTTCTTTTTCCAAATTCTCATCATGAAACCTTTCAAT
GTATTTTCAGAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATTTG
TAAGGGAGCCAGTACCTGGTAAGTTGGCGATCAAAAAACGTTCTAAAATA
CTATTTGCTTTGGCGATCTCTTTTTATTCGGAAGCCAGTTTTGAATTCGT
CATAAAAAAATTAAATTAGAATCGTCTGGTATGTCAAAGAGAGAACGATT
ATTGGTATTCATTGCAGTAATTAAATGGAAACCGCATTTTTTATTTGTTT
GTTTACGTTGCGAGTGATGAGGTAACATCCGCTACGCGCAATGCGGCTTT
CTCCTCTCTCATTCGGTCAGAAAATAATGAGAAGTTACGTTTTCAAAATT
TTCTATGCGCTTCTATTAGAAAGTATATAAACAGCCCGTTTTTTTAACAC
GATAACATGCTTTATTATCTTTCTTCTCTAAAAAATACTTCGACCTAACG
ATACCCTAACAAATTTGATACTTCGATCATTGAAACCGCAAATCAGAACT
TTAAAGAGTCGAGGTTCTCCTGTTTTTTTTTGTATTATCCAAATTACAAA
AATTCTTCAATTTTCCCTCTCGTAGCATCTGTGACAAAGGCCGATGGAAG
TCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATTTGTTGGAT
TCACTTACGTACCCCAATCCGAAGATTTAGTCGAATAAATGCATTCACCT
GTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAAAATATAGT
TGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTATAACGTCGA
TGGACATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTCCATTTTTT
CTGTAATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGTAAGGCAAA
AATTTTATTTTACTTTTTTTTGTACTTTTTGTTTTGATTTAGATAACTTA
TGAACAATTCAGAATTATAAAAAACAACCTCTAGCAACTTTTTAATAATA
GAGAACAAATTTAAAACAGGTTGGGAAAATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039264-exon-sc0002054-1575043694:22769..22850TCONS_00039264-exon-sc0002054-1575043694:22769..22850Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:22474..22557TCONS_00039264-exon-sc0002054-1575043694:22474..22557Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:22003..22081TCONS_00039264-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:19289..19364TCONS_00039264-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:18311..18398TCONS_00039264-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:17722..17768TCONS_00039264-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:17424..17481TCONS_00039264-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:17106..17189TCONS_00039264-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:16923..16985TCONS_00039264-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:16655..16723TCONS_00039264-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:16293..16336TCONS_00039264-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:15999..16067TCONS_00039264-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:15802..15838TCONS_00039264-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:15532..15618TCONS_00039264-exon-sc0002054-1575043694:15532..15618Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:15135..15338TCONS_00039264-exon-sc0002054-1575043694:15135..15338Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:13514..13564TCONS_00039264-exon-sc0002054-1575043694:13514..13564Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:13253..13342TCONS_00039264-exon-sc0002054-1575043694:13253..13342Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:10983..11040TCONS_00039264-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1575043694:10011..10475TCONS_00039264-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:22769..22850TCONS_00039264-exon-sc0002054-1510915933:22769..22850Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:22474..22557TCONS_00039264-exon-sc0002054-1510915933:22474..22557Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:22003..22081TCONS_00039264-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:19289..19364TCONS_00039264-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:18311..18398TCONS_00039264-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:17722..17768TCONS_00039264-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:17424..17481TCONS_00039264-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:17106..17189TCONS_00039264-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:16923..16985TCONS_00039264-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:16655..16723TCONS_00039264-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:16293..16336TCONS_00039264-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:15999..16067TCONS_00039264-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:15802..15838TCONS_00039264-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:15532..15618TCONS_00039264-exon-sc0002054-1510915933:15532..15618Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:15135..15338TCONS_00039264-exon-sc0002054-1510915933:15135..15338Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:13514..13564TCONS_00039264-exon-sc0002054-1510915933:13514..13564Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:13253..13342TCONS_00039264-exon-sc0002054-1510915933:13253..13342Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:10983..11040TCONS_00039264-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1510915933:10011..10475TCONS_00039264-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:22769..22850TCONS_00039264-exon-sc0002054-1491911889:22769..22850Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:22474..22557TCONS_00039264-exon-sc0002054-1491911889:22474..22557Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:22003..22081TCONS_00039264-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:19289..19364TCONS_00039264-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:18311..18398TCONS_00039264-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:17722..17768TCONS_00039264-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:17424..17481TCONS_00039264-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:17106..17189TCONS_00039264-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:16923..16985TCONS_00039264-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:16655..16723TCONS_00039264-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:16293..16336TCONS_00039264-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:15999..16067TCONS_00039264-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:15802..15838TCONS_00039264-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:15532..15618TCONS_00039264-exon-sc0002054-1491911889:15532..15618Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:15135..15338TCONS_00039264-exon-sc0002054-1491911889:15135..15338Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:13514..13564TCONS_00039264-exon-sc0002054-1491911889:13514..13564Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:13253..13342TCONS_00039264-exon-sc0002054-1491911889:13253..13342Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:10983..11040TCONS_00039264-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039264-exon-sc0002054-1491911889:10011..10475TCONS_00039264-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..22850 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.155748	0.0183964	1.17796	0.572501	7.40236e-05	1.24585e-07	2.83796	0.0204855	0.525083	0.361441	0.178881	0.002448	2.24316e-08	1.18837e-06	1.17063e-07	3.65792e-07	7.98394e-05	1.41261e-07	1.90263	5.34168e-09	0.00162143	0.0435826	0.0768492	0.00175612	0	0	3.71231	0.00461116	0.74946	0.358279
Blast
[Close]
BLAST of TCONS_00039264 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 2 
Query:   26 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1474
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039264 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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