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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039248 ID=TCONS_00039248|Name=TCONS_00039248|organism=Clytia hemisphaerica|type=transcript|length=184bp
AGACTCAATTCAAGAATATGGAAcaaagcagtttgttttcaatcaAGTAT
ATGATGAAATACTGCCCTCAGCACGGATTTTTTGTTTCATTGGAGAGATG
TCAAAATATCCATTGGAGTGGAATGACGTTTGCTTCTTATTGTGTTTCTC
CCCCTGCATCTTTTTACCAGGGCAAAACTGAAGA Run BLAST on NCBI transcript from alignment at sc0002053:29474..31153- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039248 ID=TCONS_00039248|Name=TCONS_00039248|organism=Clytia hemisphaerica|type=transcript|length=1680bp|location=Sequence derived from alignment at sc0002053:29474..31153- (Clytia hemisphaerica)
AGACTCAATTCAAGAATATGGAACAAAGCAGTTTGTTTTCAATCAAGTAT
ATGATGAAATACTGCCCTCAGCACGGATTTTTTGTAAGTAAACTTTGACC
TCTCATACCAATACAATAAGACACACCCAGGTGTAGAGAAAATATACGGA
GATCACATTAAACCTTTGGTTTCTTAGTNTGGATTTTTTGTAAGTAAGCT
TTCATACCAATACAATAAGACACGCCCATGTGTAGAGAAAATACAGAGGT
CAACCTTTGGTTTCTTGGCCTTTAAGGGTTGACTCGCCCCCAAAGGACAG
AAATTCCAACCTCCTCAAAACGTGGGTATTTTTTTCTAGAATAGTTTACA
CATATCCTCTGTTTATTGTTCAATCGTTCACTAAATCGTTCAAAATTGCT
GAATTATAAGACCCAATCAATTTATAAAAGTAATTAAGCCAAAAGGTTTT
TTGAAACAGAAAGAAAAGCCGAGTCTCGTTTTAAAACTTGAAGGTTCTTA
CAAAAAAACTTTATATTATTGTGTCTGTTCAATTTGACAGGTTTCATTGG
AGAGATGTCAAAATATCCATTGGAGTGGAATGACGTTTGCTTCTTATTGT
GTTTCTCCCCCTGCATCTTTTTACCAGGTATTTCTTGCCATCTTCCAAAA
GAAAATTACACCCCTGTCTCAATTACCCCATGATAATTCGTTATCTGCTT
TGTCCTTTTCTTTTCCCCTGTCTCGTTACCCGATGGAATTCTTTAAGCAA
GTGGAGATAAAGAAAGCTGAATACCAATGTGGTATTATTTCAAATATTTT
AATTTAATCACACAAGTAAAGCGGTAATTACATGTTCTATGTTATAAAAG
GGGGTCAGCACTTTTCATTTTCAATATTTTTCATAAAAATGCCAGGATAG
GTGTTAAAGAACTTAAAAAATCCTGTTCGTCGTGGTTTGTTAACAGTTGA
TTCTCGCTAATCCGAACTGTAACAAGGAATCTTATTTGTTCGAATTACAG
AGAGATTCAAATTAAAGAAAGTATTTTAAGAGGGTTTCTTCTTGACGGGG
ACTGGAAACAAGTTTGAATTATTGAAAGATTTTAATAATAGAAGTTCGAA
TACATGTTTTTTTATAAGCATACAAAATTCGAAAAGAGGCTCTGAGATGC
TTTGGTCGAAGGCTTGACAAGGCTGAAAAATGATTATAAGGAGGCTAATA
TATTCCAAGCAAAATTCTAGGGAAATTTCGAAAATGCGTACAATCCCAAT
CAAAATCAGAAAAATACATATTTCGTAGGCTCAAGGTAATGCTTGGTATA
TGCAATTTTTGCCATATCTGAGCCTAGATATTCTTATAAGCGCAATGCTT
ATAAAAAAACATGTAAGCGTGAGTTTGTTGTACTTACTTATTTTCCATTC
CTAGTTTAATGAAAAACCATTAAAGGTTTTATTTTTGCACAAGTGTTTCC
GTTTCATATCAGACACATATTTCATATCAAGACAGTGTCTCCCTATTGTT
ATATCATGCTGACATAAGCAAAAAAATGTTTTTCTTTTTCTCTTTCCTAC
CAATCTTGCTCCATATCCGTGTCAATCCAATGTGAAAAAGCTTGTGAATT
AAAAGTGATGAGTAAGCAAACGATATCTCTCTTAAAACCATTAAAACCAT
TAAAATTCTTTATCAGGGCAAAACTGAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039248-exon-sc0002053-1575043694:31071..31153 | TCONS_00039248-exon-sc0002053-1575043694:31071..31153 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1575043694:30527..30613 | TCONS_00039248-exon-sc0002053-1575043694:30527..30613 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1575043694:29474..29487 | TCONS_00039248-exon-sc0002053-1575043694:29474..29487 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1510915933:31071..31153 | TCONS_00039248-exon-sc0002053-1510915933:31071..31153 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1510915933:30527..30613 | TCONS_00039248-exon-sc0002053-1510915933:30527..30613 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1510915933:29474..29487 | TCONS_00039248-exon-sc0002053-1510915933:29474..29487 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1491911889:31071..31153 | TCONS_00039248-exon-sc0002053-1491911889:31071..31153 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1491911889:30527..30613 | TCONS_00039248-exon-sc0002053-1491911889:30527..30613 | Clytia hemisphaerica | exon |
| TCONS_00039248-exon-sc0002053-1491911889:29474..29487 | TCONS_00039248-exon-sc0002053-1491911889:29474..29487 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002053 | supercontig | sc0002053:29474..31153 - |
Blast
The following BLAST results are available for this feature:
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