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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039247 ID=TCONS_00039247|Name=TCONS_00039247|organism=Clytia hemisphaerica|type=transcript|length=425bp
GCTTTCTCGTTCTAGACTCAATTCAAGAATATGGAAcaaagcagtttgtt
ttcaatcaAGTATATGATGAAATACTGCCCTCAGCACGGATTTTTTGTTT
CATTGGAGAGATGTCAAAATATCCATTGGAGTGGAATGACGTTTGCTTCT
TATTGTGTTTCTCCCCCTGCATCTTTTTACCAGGGCAAAACTGAAGACAC
AACTGTATTAATTCNTTGAAGACACAACTGTATTAATTCGATCTATTGAC
GAGCAATCGTTGGTAAAACATGTCAAGTGGAACGACAAATTACAGGTATT
GTGTTCAACCTTTGTTTCTACCTTACTGGGATACAGTTTTACGGGGATTT
GATTTCGCGGATGAGACCCAAATCCGTGAAATCCGCAAAATCtactttaa
gtcatttttggaattttgaaaGGCC Run BLAST on NCBI transcript from alignment at sc0002053:29187..31166- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039247 ID=TCONS_00039247|Name=TCONS_00039247|organism=Clytia hemisphaerica|type=transcript|length=1980bp|location=Sequence derived from alignment at sc0002053:29187..31166- (Clytia hemisphaerica)
GCTTTCTCGTTCTAGACTCAATTCAAGAATATGGAACAAAGCAGTTTGTT
TTCAATCAAGTATATGATGAAATACTGCCCTCAGCACGGATTTTTTGTAA
GTAAACTTTGACCTCTCATACCAATACAATAAGACACACCCAGGTGTAGA
GAAAATATACGGAGATCACATTAAACCTTTGGTTTCTTAGTNTGGATTTT
TTGTAAGTAAGCTTTCATACCAATACAATAAGACACGCCCATGTGTAGAG
AAAATACAGAGGTCAACCTTTGGTTTCTTGGCCTTTAAGGGTTGACTCGC
CCCCAAAGGACAGAAATTCCAACCTCCTCAAAACGTGGGTATTTTTTTCT
AGAATAGTTTACACATATCCTCTGTTTATTGTTCAATCGTTCACTAAATC
GTTCAAAATTGCTGAATTATAAGACCCAATCAATTTATAAAAGTAATTAA
GCCAAAAGGTTTTTTGAAACAGAAAGAAAAGCCGAGTCTCGTTTTAAAAC
TTGAAGGTTCTTACAAAAAAACTTTATATTATTGTGTCTGTTCAATTTGA
CAGGTTTCATTGGAGAGATGTCAAAATATCCATTGGAGTGGAATGACGTT
TGCTTCTTATTGTGTTTCTCCCCCTGCATCTTTTTACCAGGTATTTCTTG
CCATCTTCCAAAAGAAAATTACACCCCTGTCTCAATTACCCCATGATAAT
TCGTTATCTGCTTTGTCCTTTTCTTTTCCCCTGTCTCGTTACCCGATGGA
ATTCTTTAAGCAAGTGGAGATAAAGAAAGCTGAATACCAATGTGGTATTA
TTTCAAATATTTTAATTTAATCACACAAGTAAAGCGGTAATTACATGTTC
TATGTTATAAAAGGGGGTCAGCACTTTTCATTTTCAATATTTTTCATAAA
AATGCCAGGATAGGTGTTAAAGAACTTAAAAAATCCTGTTCGTCGTGGTT
TGTTAACAGTTGATTCTCGCTAATCCGAACTGTAACAAGGAATCTTATTT
GTTCGAATTACAGAGAGATTCAAATTAAAGAAAGTATTTTAAGAGGGTTT
CTTCTTGACGGGGACTGGAAACAAGTTTGAATTATTGAAAGATTTTAATA
ATAGAAGTTCGAATACATGTTTTTTTATAAGCATACAAAATTCGAAAAGA
GGCTCTGAGATGCTTTGGTCGAAGGCTTGACAAGGCTGAAAAATGATTAT
AAGGAGGCTAATATATTCCAAGCAAAATTCTAGGGAAATTTCGAAAATGC
GTACAATCCCAATCAAAATCAGAAAAATACATATTTCGTAGGCTCAAGGT
AATGCTTGGTATATGCAATTTTTGCCATATCTGAGCCTAGATATTCTTAT
AAGCGCAATGCTTATAAAAAAACATGTAAGCGTGAGTTTGTTGTACTTAC
TTATTTTCCATTCCTAGTTTAATGAAAAACCATTAAAGGTTTTATTTTTG
CACAAGTGTTTCCGTTTCATATCAGACACATATTTCATATCAAGACAGTG
TCTCCCTATTGTTATATCATGCTGACATAAGCAAAAAAATGTTTTTCTTT
TTCTCTTTCCTACCAATCTTGCTCCATATCCGTGTCAATCCAATGTGAAA
AAGCTTGTGAATTAAAAGTGATGAGTAAGCAAACGATATCTCTCTTAAAA
CCATTAAAACCATTAAAATTCTTTATCAGGGCAAAACTGAAGACGCAACT
GTATTAATTCAATCAAAACTCTTTAAATTCTTTATCAGGGCAAAACTGAA
GACACAACTGTATTAATTCNTTGAAGACACAACTGTATTAATTCGATCTA
TTGACGAGCAATCGTTGGTAAAACATGTCAAGTGGAACGACAAATTACAG
GTATTGTGTTCAACCTTTGTTTCTACCTTACTGGGATACAGTTTTACGGG
GATTTGATTTCGCGGATGAGACCCAAATCCGTGAAATCCGCAAAATCTAC
TTTAAGTCATTTTTGGAATTTTGAAAGGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039247-exon-sc0002053-1575043694:31071..31166 | TCONS_00039247-exon-sc0002053-1575043694:31071..31166 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1575043694:30527..30613 | TCONS_00039247-exon-sc0002053-1575043694:30527..30613 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1575043694:29187..29428 | TCONS_00039247-exon-sc0002053-1575043694:29187..29428 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1510915933:31071..31166 | TCONS_00039247-exon-sc0002053-1510915933:31071..31166 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1510915933:30527..30613 | TCONS_00039247-exon-sc0002053-1510915933:30527..30613 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1510915933:29187..29428 | TCONS_00039247-exon-sc0002053-1510915933:29187..29428 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1491911889:31071..31166 | TCONS_00039247-exon-sc0002053-1491911889:31071..31166 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1491911889:30527..30613 | TCONS_00039247-exon-sc0002053-1491911889:30527..30613 | Clytia hemisphaerica | exon |
| TCONS_00039247-exon-sc0002053-1491911889:29187..29428 | TCONS_00039247-exon-sc0002053-1491911889:29187..29428 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002053 | supercontig | sc0002053:29187..31166 - |
Blast
The following BLAST results are available for this feature:
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