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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039239 ID=TCONS_00039239|Name=TCONS_00039239|organism=Clytia hemisphaerica|type=transcript|length=1411bp
gtgcaaaatttcaacccaatcggaccaattttgaagtctccaacctgccc
caaagttttagcctcgttttggcgaaaaactcgtccccaggccccaaaat
tcaaaatcttgaaaaaatgaaaaaactcccccagggatttgcccaatgat
caagtgtgcaaaatttcaacccaaTCGGACCAATCTTGAAGTCTCcaacc
tgccccaaagttttagcctcgtttaggcGAAAAACTgttccccaggcccc
aaaattcaaaatcttgaaaaaatgaaaaaattcccccagggatttgccca
aggatcaagtgtgcaaaatttcaacccaaTCGGACCAATCTTGAAGTCTC
caacctgccccaaagttttagccccgttttggcgaaaaactcgtccccag
gccccaaaaatcaaaattttgaaaaaaatgaaaaaagcacccccagggat
ttgcccaaggatcaagtgtgcaaaatttcagcgcaaTTTTAACCGCGGGA
CGGcatgaaagttgaaaatttgagctgtGGGACAGCATgacgaaaatgaa
aagttttgtgGTAAATCAAGTTTATTCATGAATTAGACTCTCGCATAAAA
AGGATAGCGACAAAATGTAATATGCCTCTAAACTGACTATGAGCACAGTA
ATTATCCCCCAATGGACAGTTTTCCCTAGTTAGATTGGAAGTGCTTACAA
CACCAGCTCAGCTTCGGCATCTTCATAGTCTTGCAGAGGCCAATTGTAAA
CCCACATGCTAATTAAGACTGAGGAATTACCCAAGGAGCAAATGtgcaaa
attccagccaaatcgACTCACTCTAAAGTATCCTGTAAACTAAGTAAACT
GAGTAATGGTGTTATATATTGGCGTTATGGGGTGTGACAACACCCTTAAA
TCATAtcacattgaaaatgaagaaaaactaacccagggattcacccaagg
aCCATGATTGNTGAATCATAtcacattgaaaatgaagaaaaactaaccca
gggattcacccaaggaccatgattgcaaatttttgcctttCAAACACTTC
AGAGGTCCCAAGTATGTCCAAATTTCGACTTAGTTCTCAGCCTTTAATTG
GCGACCCTAAAACTAAATTGCAAAACTGAAAAGTGGGGAAACGCCCCAGT
GAATTCACCCGAAGCGCAATGTGCTCGAAATTGAAGCGGATTCAGACAAT
TTCGaggtctccagcctgcccaCTTTTTGTACCAAGTTTAGGACAAAAAC
CAGTAACCCCACCCCCAAAATCTAATAGAGTATGAAGCACACCCAGGGAT
ACACTCAAGAACTTGTGTGCAAAATTCACACCAATCAACCTCTAGGGGGA
ATAACAAAACACTCCTAGGATTCCAAGGAACAAGCATGCAAAATATTAAC
TACTTCATAGT Run BLAST on NCBI transcript from alignment at sc0002050:26734..28144 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039239 ID=TCONS_00039239|Name=TCONS_00039239|organism=Clytia hemisphaerica|type=transcript|length=1411bp|location=Sequence derived from alignment at sc0002050:26734..28144 (Clytia hemisphaerica)
ACTATGAAGTAGTTAATATTTTGCATGCTTGTTCCTTGGAATCCTAGGAG
TGTTTTGTTATTCCCCCTAGAGGTTGATTGGTGTGAATTTTGCACACAAG
TTCTTGAGTGTATCCCTGGGTGTGCTTCATACTCTATTAGATTTTGGGGG
TGGGGTTACTGGTTTTTGTCCTAAACTTGGTACAAAAAGtgggcaggctg
gagacctCGAAATTGTCTGAATCCGCTTCAATTTCGAGCACATTGCGCTT
CGGGTGAATTCACTGGGGCGTTTCCCCACTTTTCAGTTTTGCAATTTAGT
TTTAGGGTCGCCAATTAAAGGCTGAGAACTAAGTCGAAATTTGGACATAC
TTGGGACCTCTGAAGTGTTTGaaaggcaaaaatttgcaatcatggtcctt
gggtgaatccctgggttagtttttcttcattttcaatgtgaTATGATTCA
NCAATCATGGtccttgggtgaatccctgggttagtttttcttcattttca
atgtgaTATGATTTAAGGGTGTTGTCACACCCCATAACGCCAATATATAA
CACCATTACTCAGTTTACTTAGTTTACAGGATACTTTAGAGTGAGTcgat
ttggctggaattttgcaCATTTGCTCCTTGGGTAATTCCTCAGTCTTAAT
TAGCATGTGGGTTTACAATTGGCCTCTGCAAGACTATGAAGATGCCGAAG
CTGAGCTGGTGTTGTAAGCACTTCCAATCTAACTAGGGAAAACTGTCCAT
TGGGGGATAATTACTGTGCTCATAGTCAGTTTAGAGGCATATTACATTTT
GTCGCTATCCTTTTTATGCGAGAGTCTAATTCATGAATAAACTTGATTTA
CcacaaaacttttcattttcgtcATGCTGTCCCacagctcaaattttcaa
ctttcatgCCGTCCCGCGGTTAAAAttgcgctgaaattttgcacacttga
tccttgggcaaatccctgggggtgcttttttcatttttttcaaaattttg
atttttggggcctggggacgagtttttcgccaaaacggggctaaaacttt
ggggcaggttgGAGACTTCAAGATTGGTCCGAttgggttgaaattttgca
cacttgatccttgggcaaatccctgggggaattttttcattttttcaaga
ttttgaattttggggcctggggaacAGTTTTTCgcctaaacgaggctaaa
actttggggcaggttgGAGACTTCAAGATTGGTCCGAttgggttgaaatt
ttgcacacttgatcattgggcaaatccctgggggagttttttcatttttt
caagattttgaattttggggcctggggacgagtttttcgccaaaacgagg
ctaaaactttggggcaggttggagacttcaaaattggtccgattgggttg
aaattttgcac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039239-exon-sc0002050-1491911889:26734..28144 | TCONS_00039239-exon-sc0002050-1491911889:26734..28144 | Clytia hemisphaerica | exon |
| TCONS_00039239-exon-sc0002050-1510915933:26734..28144 | TCONS_00039239-exon-sc0002050-1510915933:26734..28144 | Clytia hemisphaerica | exon |
| TCONS_00039239-exon-sc0002050-1575043694:26734..28144 | TCONS_00039239-exon-sc0002050-1575043694:26734..28144 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002050 | supercontig | sc0002050:26734..28144 . |
Blast
The following BLAST results are available for this feature:
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