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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039188 ID=TCONS_00039188|Name=TCONS_00039188|organism=Clytia hemisphaerica|type=transcript|length=242bp
AATATTAGTTTGAGTACAGCACTTCAAGTGGACAGGATGACTCAcctgtg
aaaaataaaaataatccaCAGCAAAAGACAACAGCTTATAAATCCTATCC
AGATACACCTCCAAAGAAAGGAAGATCCTTCAGTTCTTGTTCAAAGAAAC
CAGAATCACCAGAATCACCTGTCAAGAGAAACCAGACTCCCTTACAAAAA
AATCAAGTAataAATCCTATCCGGATCCACCTCCAAAGAAAG Run BLAST on NCBI transcript from alignment at sc0002038:1318..2454+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039188 ID=TCONS_00039188|Name=TCONS_00039188|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at sc0002038:1318..2454+ (Clytia hemisphaerica)
AATATTAGTTTGAGTACAGCACTTCAAGTGGACAGGATGACTCAcctgtg
aaaaataaaaataatccaCAGCAAAAGACAACAGCTTGTAAGCAGTGTTT
TGATTTCCCCCTCTTAACTACATAAGTATTAAGAAGTATTTAGAATTTCT
ACTTGATTTATGACTCTTTCTGGTTATTGGCCATAAGAGTATTTTAAGAA
ATGATTTCATGTGATTTTTTCTCCAGATAAATCCTATCCAGATACACCTC
CAAAGAAAGGAAGATCCTTCAGTTCTTGTTCAAAGAAACCAGAATCACCA
GAATCACCTGTCAAGAGAAACCAGACTCCCTTACAAAAAAATCAAGTAgt
aaaaattcctaaaaggATTCCTATGTCATTCCCTACTTTAATCAATaaca
tttgcaaatttttgccttctcaggcaatagacgatatcggctttaggaat
tctccccgaatgattacccatgatgcattgcgcaaaaatattcgcggaca
atattgacttactgaatttttttgtgcaatgcatcatgggtaatcattcg
gggagaatttcgttaagccgatatcgtctatttatCACTATCCCTTAAGG
TCTTCAGGCTTCTAGTCTAAATTATCCCCTTTCATAactaaatattgaaa
atttctaCTTTGTTTATGACTCTTTTTGGTTATTAGGCATACTTTGAGAG
TATTCAGGAAATAATTTcatgttattttttcttcagataAATCCTATCCG
GATCCACCTCCAAAGAAAGCAAGATCCTCACCCAACAGTTCTTGTGCAAA
GAAAACAGAAACACCAGAATCACCTGTCAAGAGAAAACCAGACGCCCCTA
CGAAAAGATCACAAAGTAAGCATTGCTAAAAGGATTCTCATGTCACTCCA
TACTTTATTTAATCAATAAcgtttgtaaatttttgtcttTACGGGCAAAT
TCTCACTATCCCTTAAAGTTTTCAGTCTTCTGGTCTAAATTATCCCcttc
aataaataaatattaagaatttctACTTTATTTATGACTCTTTTTGGTTA
TTAGGCATTCTTTGAGAGTATTCAGGAAATAATTTcatgttattttttct
tcagataAATCCTATCCGGATCCACCTCCAAAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039188-exon-sc0002038-1491911889:1318..1404 | TCONS_00039188-exon-sc0002038-1491911889:1318..1404 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1510915933:1318..1404 | TCONS_00039188-exon-sc0002038-1510915933:1318..1404 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1575043694:1318..1404 | TCONS_00039188-exon-sc0002038-1575043694:1318..1404 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1491911889:1544..1665 | TCONS_00039188-exon-sc0002038-1491911889:1544..1665 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1510915933:1544..1665 | TCONS_00039188-exon-sc0002038-1510915933:1544..1665 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1575043694:1544..1665 | TCONS_00039188-exon-sc0002038-1575043694:1544..1665 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1491911889:2422..2454 | TCONS_00039188-exon-sc0002038-1491911889:2422..2454 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1510915933:2422..2454 | TCONS_00039188-exon-sc0002038-1510915933:2422..2454 | Clytia hemisphaerica | exon |
| TCONS_00039188-exon-sc0002038-1575043694:2422..2454 | TCONS_00039188-exon-sc0002038-1575043694:2422..2454 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002038 | supercontig | sc0002038:1318..2454 + |
Blast
The following BLAST results are available for this feature:
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