TCONS_00039178 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039178
Unique NameTCONS_00039178
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039178 ID=TCONS_00039178|Name=TCONS_00039178|organism=Clytia hemisphaerica|type=transcript|length=151bp
GGGATGTTACTGTCAGCATGTGGCATCCTTACAATGAAGAAGGGAAAGGC
ATCTCtcttatcaaaaagtttatatctaaaaatattgttttcaacggtga
tatctaaatctaaaaacGATGCATGGTTTCCATGGTGCTCAACTTTGAGA
T
Run BLAST on NCBI

transcript from alignment at sc0002036:1397..1547

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039178 ID=TCONS_00039178|Name=TCONS_00039178|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0002036:1397..1547 (Clytia hemisphaerica)
ATCTCAAAGTTGAGCACCATGGAAACCATGCATCgtttttagatttagat
atcaccgttgaaaacaatatttttagatataaactttttgataagaGAGA
TGCCTTTCCCTTCTTCATTGTAAGGATGCCACATGCTGACAGTAACATCC
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023601XLOC_023601Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039178-exon-sc0002036-1491911889:1397..1547TCONS_00039178-exon-sc0002036-1491911889:1397..1547Clytia hemisphaericaexon
TCONS_00039178-exon-sc0002036-1510915933:1397..1547TCONS_00039178-exon-sc0002036-1510915933:1397..1547Clytia hemisphaericaexon
TCONS_00039178-exon-sc0002036-1575043694:1397..1547TCONS_00039178-exon-sc0002036-1575043694:1397..1547Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002036supercontigsc0002036:1397..1547 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039178 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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