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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039177 ID=TCONS_00039177|Name=TCONS_00039177|organism=Clytia hemisphaerica|type=transcript|length=256bp
CGTGCATTCAAATCAAGAGAAAAACGTACGGCGGACAAATATCGAAAAAT
CGGCCACGACGGAAGCCGAAGAAAAAGAATTTATACCGGTTATCTTCCAG
CAACCAATACAATCACATGGCGTTTTTGGCGTTGGAATATCTCACTTGGT
CCATCCGCCCTCGCACCCTCCCAAGCTCTTAGGATTACCAGCAGGTTCAA
ACGATGAAGTAAACAAAGAACCGAGTGGCAATCACATTGTAAAGAAAAGA
CCAACC Run BLAST on NCBI transcript from alignment at sc0002034:5644..7650+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039177 ID=TCONS_00039177|Name=TCONS_00039177|organism=Clytia hemisphaerica|type=transcript|length=2007bp|location=Sequence derived from alignment at sc0002034:5644..7650+ (Clytia hemisphaerica)
CGTGCATTCAAATCAAGAGAAAAACGTACGGCGGACAAATATCGAAAAGt
aagaacttttttttttaccagTCAATTTTCCGTAATCAGAAAGTATACAC
TTTTCTCGTCACGCACTTGACTTACTTGACTTACTGACTTAATTGCATAA
TCCCACGGTGATCTTTGCACACTTCTTTGAGACAAACTCTACACAAAaca
caaagaggaatgaatacgtaggggtggtacaattactttcggtcggggtt
gtggatggtgaaatttgtcgttcttttttaatgTTGTAGGCACTTTATCC
CCCTCGAGGCCCTGTGTCTTATCGGATAAGATCGTTCCATCTTTTAGGGG
GGTGTCCACGAggtctttttttcttcaaatcacACTTATAAGCTTTGTGC
GCATAGTTGATATTGGGGTCTCTTCTTGTGATGTGACCAAACCAGTTCAT
GCTCCTCTTTTTGTTCATATCAAGTCACGCACAAAAGAAATcctgtttat
tttgtaaagtATAAAGTTCTgtaacaaaatttgttttaactTAAATGTAA
ACCTGCTGCCATAAATCTTGTATCCTTGTTATCGTGCTGTGATCTTCACC
CATCTTCATatccttttttgtctccgctgcagattatattgagacagact
ttcaGAACTCAAATTTGCTTGAAATTATCTGAATTCATATTAGAAACTTT
CGTAATTGCTCTTTTACTTCGTAACTTCAAATTGGGATTTTGATCGACTT
GAGGGCCAATTTTTACAACCCAAACCAATCATGTAACTTGGGTGAATTCA
TTTTAAGAACGCCTTTATTGCATGTATTCGCAACAGATTTCGATGGGCCA
GATGGAGTGCcttaagcttttccaagcaaaaaaaaagcgAATATCGTAAA
AAagattgttgctattgttttcgaaaattggcgaagcttctgattggtca
agcgctgaagtTCTATTATAATGTCACATGACGTGGGTAGGAGCTCCTAC
CGAACCACGGCACACTTCTCAGCTAAAGTACGCTATCCAGCTCGCTCGCT
TTTCACACTTTATTAGATTCCACCACAtagttcgaacccccccccctatt
taaggggggatgacaccttccaaaaaagggaagaaggggGGGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ngacttaatttttctttactgtttcccttccctttttaccataaaaaatt
tagcccgaaatccttgggggataggtatttttaaaggttggggggatcat
ttaagaaggggggatcatttaagaagggggggatcagacccctttccgca
ctatgcaCCATTTTCAACGATTGCGTCATTTTTACATTTAATCTTTTAGA
TCGGCCACGACGGAAGCCGAAGAAAAAGAATTTATACCGGTTATCTTCCA
GCAACCAATACAATCACATGGCGTTTTTGGCGTTGGAATATCTCACTTGG
TCCATCCGCCCTCGCACCCTCCCAAGCTCTTAGGATTACCAGCAGGTTCA
AACGATGAAGTAAACAAAGAACCGAGTGGCAATCACATTGTAAAGAAAAG
ACCAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039177-exon-sc0002034-1491911889:5644..5691 | TCONS_00039177-exon-sc0002034-1491911889:5644..5691 | Clytia hemisphaerica | exon |
| TCONS_00039177-exon-sc0002034-1510915933:5644..5691 | TCONS_00039177-exon-sc0002034-1510915933:5644..5691 | Clytia hemisphaerica | exon |
| TCONS_00039177-exon-sc0002034-1575043694:5644..5691 | TCONS_00039177-exon-sc0002034-1575043694:5644..5691 | Clytia hemisphaerica | exon |
| TCONS_00039177-exon-sc0002034-1491911889:7443..7650 | TCONS_00039177-exon-sc0002034-1491911889:7443..7650 | Clytia hemisphaerica | exon |
| TCONS_00039177-exon-sc0002034-1510915933:7443..7650 | TCONS_00039177-exon-sc0002034-1510915933:7443..7650 | Clytia hemisphaerica | exon |
| TCONS_00039177-exon-sc0002034-1575043694:7443..7650 | TCONS_00039177-exon-sc0002034-1575043694:7443..7650 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002034 | supercontig | sc0002034:5644..7650 + |
Blast
The following BLAST results are available for this feature:
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