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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039174 ID=TCONS_00039174|Name=TCONS_00039174|organism=Clytia hemisphaerica|type=transcript|length=1432bp
GATCCTGTCATCTATTTTTCTATACAAAAAAAGAATTGTAAACCACCAGG
TAAAAAATCCTATTTAATTCAACGTTTCATTCCAACCTTTATGTGCTAAA
TTATTAGGGAGTCAGTTCTCaatctttgagaaaaaatttcaaattttgac
caataaaCCTAAAAAGGGctcttatttcaaaatacaatttgcaatttctt
tgaaaactcgcATGGTTTTGAAACACCTTTAATGAGAGCAACACAGAGTT
TTTTATACCTTTCTTTCTATCATAGGTAAAATCTGCAAGCTTTATAGTCA
TGTTGTGAACAACCTACAAATGATCATGACGAGAGGGAAGAAAAAAGAGC
CTcccaaaataattcaaaaactcCAGgttattttcctatttttatttAAC
ACAAAACAATCTGAAGttactttttccaaatcttaatgACATTTTAATCG
TCAGATTGAATAGTCGTCTCGAGTGTAAATGACATTACAGAAATCTGTAC
TGTAATGTCATTTACAATCGCGACTATTCAATAATTAGCTGTCgattaaa
aagtaatttaaatTTGGAAAAGGTCACTTCAGTTTGTGTTATGTTATTTG
TATTtcaagaacatttcaagaagtATACCAATTTCATTTGCGCAAGAGTA
GACAAGAACTAAAAACTGTACAGTTTGTGAGCCAAATCTTTTCGACATTA
TAAACATTCTATTGATTTAAAGGTTCAATTCAGCATGAGTGAGAATATGT
AAAATTACtcctttctttttatcattctCTTCTCAGGCAAAGGACGACTT
AGAAATGCTTCAAAGTCACAAAGCCACAAAGATCCTTATTtctgatgatg
aaataaatATTCTCTCCAGTGGGAAACTACTGGCCAAATTGGAGCCTCAT
GAAATCGAGCTGGCTGTTATAACATTTTGTTCTCACTATTACTTAATGGA
TCTGAATTATCCACCGTGTTGGTCAGCGGCGCTGACGTTTCTACAATTTG
CGGTCCTTGGCGAGGAGGATTTGGAAAATGTTCAAGATAAAGAAATCTGG
AAGAAAAATTGGGAGgacttttgtgatttttcagATAATATGGAAGGGGA
AGAGGTCTTAGAAGACGATTAATGttaaattttcctgaaataCTGACact
gtttcttttgtttggatattttcttcgtacacgcttttttttataagaac
cagtaaattttggctcaggctgggctgttcttaattttttgaaattttca
ggcttaaatgttcttacgatgttcttatNTCTTAGtacacgatttttttt
ataagaaccagtaaattttggctcaggctgggctgttcttaattttttga
aattttcaggcttaaatgttcttacgatgttcttattATACTTAGTTTCT
TTACTTAAGAACTTAAAATAGTTTAAAATCTG Run BLAST on NCBI transcript from alignment at sc0002032:18548..19979+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039174 ID=TCONS_00039174|Name=TCONS_00039174|organism=Clytia hemisphaerica|type=transcript|length=1432bp|location=Sequence derived from alignment at sc0002032:18548..19979+ (Clytia hemisphaerica)
GATCCTGTCATCTATTTTTCTATACAAAAAAAGAATTGTAAACCACCAGG
TAAAAAATCCTATTTAATTCAACGTTTCATTCCAACCTTTATGTGCTAAA
TTATTAGGGAGTCAGTTCTCaatctttgagaaaaaatttcaaattttgac
caataaaCCTAAAAAGGGctcttatttcaaaatacaatttgcaatttctt
tgaaaactcgcATGGTTTTGAAACACCTTTAATGAGAGCAACACAGAGTT
TTTTATACCTTTCTTTCTATCATAGGTAAAATCTGCAAGCTTTATAGTCA
TGTTGTGAACAACCTACAAATGATCATGACGAGAGGGAAGAAAAAAGAGC
CTcccaaaataattcaaaaactcCAGgttattttcctatttttatttAAC
ACAAAACAATCTGAAGttactttttccaaatcttaatgACATTTTAATCG
TCAGATTGAATAGTCGTCTCGAGTGTAAATGACATTACAGAAATCTGTAC
TGTAATGTCATTTACAATCGCGACTATTCAATAATTAGCTGTCgattaaa
aagtaatttaaatTTGGAAAAGGTCACTTCAGTTTGTGTTATGTTATTTG
TATTtcaagaacatttcaagaagtATACCAATTTCATTTGCGCAAGAGTA
GACAAGAACTAAAAACTGTACAGTTTGTGAGCCAAATCTTTTCGACATTA
TAAACATTCTATTGATTTAAAGGTTCAATTCAGCATGAGTGAGAATATGT
AAAATTACtcctttctttttatcattctCTTCTCAGGCAAAGGACGACTT
AGAAATGCTTCAAAGTCACAAAGCCACAAAGATCCTTATTtctgatgatg
aaataaatATTCTCTCCAGTGGGAAACTACTGGCCAAATTGGAGCCTCAT
GAAATCGAGCTGGCTGTTATAACATTTTGTTCTCACTATTACTTAATGGA
TCTGAATTATCCACCGTGTTGGTCAGCGGCGCTGACGTTTCTACAATTTG
CGGTCCTTGGCGAGGAGGATTTGGAAAATGTTCAAGATAAAGAAATCTGG
AAGAAAAATTGGGAGgacttttgtgatttttcagATAATATGGAAGGGGA
AGAGGTCTTAGAAGACGATTAATGttaaattttcctgaaataCTGACact
gtttcttttgtttggatattttcttcgtacacgcttttttttataagaac
cagtaaattttggctcaggctgggctgttcttaattttttgaaattttca
ggcttaaatgttcttacgatgttcttatNTCTTAGtacacgatttttttt
ataagaaccagtaaattttggctcaggctgggctgttcttaattttttga
aattttcaggcttaaatgttcttacgatgttcttattATACTTAGTTTCT
TTACTTAAGAACTTAAAATAGTTTAAAATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039174-exon-sc0002032-1491911889:18548..19979 | TCONS_00039174-exon-sc0002032-1491911889:18548..19979 | Clytia hemisphaerica | exon |
| TCONS_00039174-exon-sc0002032-1510915933:18548..19979 | TCONS_00039174-exon-sc0002032-1510915933:18548..19979 | Clytia hemisphaerica | exon |
| TCONS_00039174-exon-sc0002032-1575043694:18548..19979 | TCONS_00039174-exon-sc0002032-1575043694:18548..19979 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002032 | supercontig | sc0002032:18548..19979 + |
Blast
The following BLAST results are available for this feature:
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