TCONS_00039167 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039167
Unique NameTCONS_00039167
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039167 ID=TCONS_00039167|Name=TCONS_00039167|organism=Clytia hemisphaerica|type=transcript|length=108bp
CGTTTGTAATGTTGATGAGCAATCCAATGGAAAGAAGGAGACACAGCAAC
TTCATCATCTTGTTCTTGTTgcactctcaaattgatcagcTCACACAGTA
CAATagac
Run BLAST on NCBI

transcript from alignment at sc0002030:7957..8142-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039167 ID=TCONS_00039167|Name=TCONS_00039167|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at sc0002030:7957..8142- (Clytia hemisphaerica)
CGTTTGTAATGTTGATGAGCAATCCAATGGAAAGAAGGAGACATAANCTT
ACCAGTGCACTTTGTGGACCTTTTGCGCCGTTTGTAATGTTGATGAGTAA
TCCAATGGAAAGAATGAGACACAGCAACTTCATCATCTTGTTCTTGTTGC
ACTCTCAAATTGATCAGCTCACACAGTACAATAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023592XLOC_023592Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039167-exon-sc0002030-1575043694:8101..8142TCONS_00039167-exon-sc0002030-1575043694:8101..8142Clytia hemisphaericaexon
TCONS_00039167-exon-sc0002030-1575043694:7957..8022TCONS_00039167-exon-sc0002030-1575043694:7957..8022Clytia hemisphaericaexon
TCONS_00039167-exon-sc0002030-1510915933:8101..8142TCONS_00039167-exon-sc0002030-1510915933:8101..8142Clytia hemisphaericaexon
TCONS_00039167-exon-sc0002030-1510915933:7957..8022TCONS_00039167-exon-sc0002030-1510915933:7957..8022Clytia hemisphaericaexon
TCONS_00039167-exon-sc0002030-1491911889:8101..8142TCONS_00039167-exon-sc0002030-1491911889:8101..8142Clytia hemisphaericaexon
TCONS_00039167-exon-sc0002030-1491911889:7957..8022TCONS_00039167-exon-sc0002030-1491911889:7957..8022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002030supercontigsc0002030:7957..8142 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039167 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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