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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039152 ID=TCONS_00039152|Name=TCONS_00039152|organism=Clytia hemisphaerica|type=transcript|length=1215bp attttgctattttccagCGGGTATCCTCACATTTCCAAGAATTTATTCTT GACTTTAAAAGGTTCGTCCAGGTACGCCCCGAAAGCTTCGTATAGTAGTC GACTAAGCACGACGAACAAGACGGCGGCGGTTGAACACACGCGCATGGAG CAGATGCCAAGCACGACGCCAAGAGGACAGGGCGAAGTCATCAAGTTCGG AAAAATCAATAAGATTAATGAGGATGGTCGAAAAGAACCAGATCTTaaca aatttaaagatttttcacaCTCCTTCAAActtgaatcaaaaacaaaaaag actgAAGTGAAGACAGACACGACCGCTTCCACAACACATGTGGCTGTTGC AACCCCATCTTCCACGACCAAAGACAGTAAGGCGGTCGTCGAAGAAACAA TCATGAAATCTGTTGCAAATGTTGCTTTATCTGCACCAGTTCCTGAAACT GTTCTTTTATCTAAACCCAACACCAAAGACGTCTCCGCAAGACCTTCCAT CACAACCACGATTTCTACAACAACTACTACAACCTCTGCAACACGAGTCG CGACATCTGCAACCGACACTAAGAACGTCTCAACAACAACCCCGACAGTT TCAACGACAACTACGACATCTGTCGTCTCTAGTGTTGTCAGTACCGTCAC AGCCTCCTCTACGACACCTTCCAAGTAAGTAAAACTAATCAGAGAGGAGT ATATTTGATTCTAGAATACTAGAATAAGAGTAATTTATTAACTCTTTCGG AGGCAATTTTTCGAGGGGGGGGGGCGAATTTCTTAGAATCaatgatattt ttaaagatatatttctatttcttctttctttttggccatgtccgtccgtc cgtccgttcgttcgttcgttcgtctgttgccagcttttttcaggattggc tcattagttttttttgatttttggcataaagatgcaaaatggcaatgccc aaaatgtgacggagcccgattttcgaaaaaaaacatttccggcggtaaat accggaaatatgccggaaaaactgtttttttggcattttcacgagatttt atcattagttttttctgattttttgctcaaagatgcgtattaacaatgcc caaaacatggccgagtccaatttttgagaaagaattttttcggtcgaaaa tgccggaaatatgccggaaatcgccgtttttctggattttcattggattt ttttcttataattgg Run BLAST on NCBI protein sequence of TCONS_00039152-protein >TCONS_00039152-protein ID=TCONS_00039152-protein|Name=TCONS_00039152-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
ILLFSSGYPHISKNLFLTLKGSSRYAPKASYSSRLSTTNKTAAVEHTRME QMPSTTPRGQGEVIKFGKINKINEDGRKEPDLNKFKDFSHSFKLESKTKK TEVKTDTTASTTHVAVATPSSTTKDSKAVVEETIMKSVANVALSAPVPET VLLSKPNTKDVSARPSITTTISTTTTTTSATRVATSATDTKNVSTTTPTV STTTTTSVVSSVVSTVTASSTTPSK Run BLAST on NCBI transcript from alignment at sc0002026:9..5064- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039152 ID=TCONS_00039152|Name=TCONS_00039152|organism=Clytia hemisphaerica|type=transcript|length=5056bp|location=Sequence derived from alignment at sc0002026:9..5064- (Clytia hemisphaerica) ATTTTGCTATTTTCCAGCGGGTATCCTCACATTTCCAAGAATTTATTCTT
GACTTTAAAAGGTTCGTCCAGGTACGCCCCGAAAGCTTCGTATAGTAGTC
GACTAAGCACGACGAACAAGACGGCGGCGGTTGAACACACGCGCATGGAG
CAGATGCCAAGCACGACGCCAAGAGGACAGGGCGAAGTCATCAAGTTCGG
AAAAATCAATAAGATTAATGAGGATGGTATGGCTTTTTTTTGTCCGTAAC
TTTTTAACAACTCTTTTTGTGAATCAGAGCAGGTCCGATGCAGTACTATT
ACAGGTTTAGCGTAAAGTTTTCCCAGAAATAAACGGATTTATGCCAAGAA
AGGATTTCAAAAGGGAAAGAATTCTCGTAAAAAACGCTAATTTCATACCT
TCGCACCTCGAAGATAAGTTTTGTCAGAGTACTGTGTTAACAAGGATCGC
AAGATTGACAGTTTAAAATGGTGCCAGATCATTTTTGTCCATAATCGAAG
ATATAGTCGATATTTTACAGCAATATATGAACTCTAACGCGGCGTTGGAA
GTGGTATAGGTTCGTGGGGTTGGCGCTTTTAGACGTCTCAGCCATCGTTC
CAGCCATTGGGCCATTCCATTTTATCTCCATACAGGAGGGGGGGGGGGAC
AAACATTTCCAGGGGGTAACCTGAGAAGAATTTCCAGGGGGGGTCTAAAG
GAGTGTTTTTTTTTCCAGGGGGTAAATATAGTTATTCTAAAATTTGGACA
AGACAAGTTTTATTTCGTCCACTGTCACTTTAAAGTATAAAATAAAACTT
TTCCGAGGGTTATTTTGCAAATTTTGCTATTTTCCAGCGGGTATCCTCAC
ATTTCCAAGAATTTATTCTTGACTTTAAAAGGTTCGTCCAGGTACGCCCC
GAAAGCTTCGTATAGTAGTCGACTAAGCACGACGAACAAGACGGCGGCGG
TTGAACACACGCGCATGGAGCAGATGCCAAGCACGACGCCAAGAGGACAG
GGCGAAGTCATCAAGTTCGGAAAAATCAATAAGATTAATGAGGATGGTAT
GGCTTTTTTTTGTCCGTAACTTTTTAACAACTCTTTTTGTGAATCAGAGC
AGGTCCGATGCAGTACTATTACAGGTTTAGCGTAAAGTTTTCCCAGAAAT
AAACGGATTTATGCCAAGAAAGGATTTCAAAAGAGAAAGAATTCTCGTAA
AAAACGCTAATTTCATACCTTCGCACCTCGAAGATAAGTTTTGTCAGAGT
ACTGTGTTAACAAGGATCGCAAGATTAACAGTTTAAAATGGTGCCAGATC
ATTTTTGTCCATAATCGAAGATATAGTCGATATTTTACAGCAATATATGA
ACTCTAACGCGGCGTTGGAAGTGGTATAGGTTCGTGGGGTTGGCGCTTTT
AGACGTCTCAGCCATCGTTCCAGCCATTGGGCCATTCCATTTTATCTCCA
TACAGGAGGGGGGGGTGGACAAACATTTCCAGGGGGTAACCTGAGAAGAA
TTTCCAGGGGGGGTCTAAAGGAGTGTTTTTTTTTCCAGGGGGTAAATATA
GTTATTCTAAAATTTGGACAAGACAAGTTTTATTTCGTCCACTGTCACTT
TAAAGTATAAAATAAAACTTTTCCGAGGGTTATTTTGCAAATTTTGCTAT
TTTCCAGCGGGTATCCTCACATTTCCAAGAATTTATTCTTGACTTTAAAA
GGTTCGTCCCCCCCCCCCCCCTACCCTGTATCAATTTTTAAATGGAACAG
CCCATTGGTGTCGTTGATTTTTTCTGAAGATGATCCTTCTTTTCTTTACT
TGCAGGTCGAAAAGAACCAGATCTTAACAAATTTAAAGATTTTTCACACT
CCTTCAAAGTAAGTAATGCATGAATGCTTCTGCACGCTTTTTTTTTATAA
GAATATGTTTTATAAGAATATCAGGGTGCTAAATTTACCAAATCGTAAGA
ATACCCTGAGAATACCCTCTAGGGTGAATTTCACAGAATTTGATAAGAAT
ACAATCATTTTGTATTTGGTTGACAGAAAAAGCTGCTTCCTTTGTTAGAC
TTGAATTTGAACTTTGAGGCAGAAATGTAATTTTAGCTCCAAATGTTCAT
TCAAAAGCCCCAAAACTCTCAAATTGATCATTTCTCATGTTTGTAAAAAG
TCAAGTCTAAAAAAGTAAGAATACGTTAAGAATACTTGACCCTCATTCAA
ATTACACAATTCTTATTAAAAGAAAGCGCGCATTTTACCGATGGTTTGTT
TGTATGTCAAAATTTGGAGATTTATTTGGGAACAGTTGAGTAGAGTGTCC
ACTTTTTATGTTCTTTTTGCCATATTGCAAATAAAACATTGGTTTTTAAT
TACAGGCATATGTCTAGATTTATTTTTTTGCGATAAACAAATTTGCGATG
AACTGAAACCCAGCCTTAGGTTAAGCGAGTAGTGATTTCCCTAGACTATA
GTCTATTTCTGACTGAACTGTGGTGCTTTTTGATGACTCTGATAGCGCTG
AGTCCAGTGAAGTAGACTAGAGGACTTCGCCATCTTGATTTTGTTCACTT
TCGTTTTCAAAAATTATATGAAAACATCAAAGCAATAAAATTTTTTCTGA
AAATCCATTACAGTTTATGAAATTATAATAAAAACAAGAAAATACCTCCA
AAATTTGAAAAAAATTGGTCTATCGGTCATGGTTTTCTGTTTGTTTTTCT
TCAAAAAGGGACTGTATCTAGTGGTACGGATTTGCTACCACCTCAAGCAA
AGCCAAAAATTGGAGCCTGCCAAATTACATCGGGCCACTTATCAGCGCCA
TCCAGTCTATCAAAAAGCTTTAATTGACCCCCGGGTTATGATTTCCCAGC
CTTTCTTCAAAAAAAGTAAATAAAGTTGGAAAACTTTCGTTCATGCCAAG
GAGATCTGGAGGTATCTACGACAGTTAGTCAGAAAATTGACTTGTCAAAG
CTTGGATCAAGTCGGTTCCAACAAGTTACCATAAAAGCTACCCTCAGAAA
AACACACAGTTTCTATTGCATCTTTAGCTACCACCCACCCCTTCATTAGT
CTGAATATTATTAAAAAGAGAGTTTTTAGAAGCTCCCAAAACTATACGAC
AAAAATTCAAAATAAATTTCGAATATTCTAATACTTCGACATACCTTATN
ACAAAAATTCAAAATAAATTTCGAATATTCTAATACTTCGACATACCTTA
TCGCCCCTGTTTACGCTGGCCCTTATTGGTGTTATTTTCTCGTCGCTGGA
GAAATAAGGGCCGGCGTAAGGGGCTGGATTTAAATTAAAGACGACCTAAA
AAGGACAGAAATTGAGTTTTGATGTAATAAGGGCCGGCGTTGAAGGGGTC
GGCGTTAAATTAGGACTGGCGTAAAAAGGACTGGCGTAAAAAGATGTCGA
TAAGGTAGCTGCTTTCAACCAGTAAAATCCAGGTCTTCGGTATCGGGGGA
ATTGATATCTCACAAAATTTTCTTATAATTTTAGCTTGAATCAAAAACAA
AAAAGACTGAAGTGAAGACAGACACGACCGCTTCCACAACACATGTGGCT
GTTGCAACCCCATCTTCCACGACCAAAGACAGTAAGGCGGTCGTCGAAGA
AACAATCATGAAATCTGTTGCAAATGTTGCTTTATCTGCACCAGGTATAT
AGTACCTATATAGTATAGGCGCAATTACCCCTCTCTTCTGTAAATCTACA
ACGGTCTACCCAGAATTTCTAATGTTTTAACAAGTAGGATGCTTGTTTTT
GCAGGACATTGTTTTCATTCAAAACATGAAGTAATCTCAGATCTTTTACT
TTGGTGTCCTGTCGGTCCTAAACGATCGAGGAAACGAACGTTTCTCGACA
CTCTAAAGCGGGAAACAGGCCTGGAAACGCTAGAGCTCGGAACAGTAATG
GCTGATCGTGAACTTTGGAGAGAGGGTTATTGTTTGTTTCTGACCTAGGT
CCTCTCGGACCTAGATCGAAGGATGATGATGATGATGATATAGTCCCTAC
CCCCATTGATGTCATTTCTACAGCGGAGTGTATTTTTTAAGTCTTTTCAA
TAATTAATATTGAACTATTTCATTCGGTACCAATGACATAATTTGTATTA
AATAATTCATATTTTGTATAGAATTCTGAGTCTGATACGGACTAGTACAA
TAGTCGTTGAGAAAGACTCATTTTAAGTAAAATACAAAACAAACTCAAAA
GTAATGATGGTGCATGGTCCGTTTTCCTCAAAAAGTGTTGATTTAAAATT
TCAACCTTTTTTTTCTGTCTATGTTTACAGTTCCTGAAACTGTTCTTTTA
TCTAAACCCAACACCAAAGACGTCTCCGCAAGACCTTCCATCACAACCAC
GATTTCTACAACAACTACTACAACCTCTGCAACACGAGTCGCGACATCTG
CAACCGACACTAAGAACGTCTCAACAACAACCCCGACAGTTTCAACGACA
ACTACGACATCTGTCGTCTCTAGTGTTGTCAGTACCGTCACAGCCTCCTC
TACGACACCTTCCAAGTAAGTAAAACTAATCAGAGAGGAGTATATTTGAT
TCTAGAATACTAGAATAAGAGTAATTTATTAACTCTTTCGGAGGCAATTT
TTCGAGGGGGGGGGGCGAATTTCTTAGAATCAATGATATTTTTAAAGATA
TATTTCTATTTCTTCTTTCTTTTTGGCCATGTCCGTCCGTCCGTCCGTTC
GTTCGTTCGTTCGTCTGTTGCCAGCTTTTTTCAGGATTGGCTCATTAGTT
TTTTTTGATTTTTGGCATAAAGATGCAAAATGGCAATGCCCAAAATGTGA
CGGAGCCCGATTTTCGAAAAAAAACATTTCCGGCGGTAAATACCGGAAAT
ATGCCGGAAAAACTGTTTTTTTGGCATTTTCACGAGATTTTATCATTAGT
TTTTTCTGATTTTTTGCTCAAAGATGCGTATTAACAATGCCCAAAACATG
GCCGAGTCCAATTTTTGAGAAAGAATTTTTTCGGTCGAAAATGCCGGAAA
TATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGATTTTTTTCTTAT
AATTGG Coding sequence (CDS) from alignment at sc0002026:9..5064- >TCONS_00039152 ID=TCONS_00039152|Name=TCONS_00039152|organism=Clytia hemisphaerica|type=CDS|length=2712bp|location=Sequence derived from alignment at sc0002026:9..5064- (Clytia hemisphaerica) TTCCTGAAACTGTTCTTTTATCTAAACCCAACACCAAAGACGTCTCCGCA AGACCTTCCATCACAACCACGATTTCTACAACAACTACTACAACCTCTGC AACACGAGTCGCGACATCTGCAACCGACACTAAGAACGTCTCAACAACAA CCCCGACAGTTTCAACGACAACTACGACATCTGTCGTCTCTAGTGTTGTC AGTACCGTCACAGCCTCCTCTACGACACCTTCCAAGTAACTTGAATCAAA AACAAAAAAGACTGAAGTGAAGACAGACACGACCGCTTCCACAACACATG TGGCTGTTGCAACCCCATCTTCCACGACCAAAGACAGTAAGGCGGTCGTC GAAGAAACAATCATGAAATCTGTTGCAAATGTTGCTTTATCTGCACCAGG TCGAAAAGAACCAGATCTTAACAAATTTAAAGATTTTTCACACTCCTTCA AAATTTTGCTATTTTCCAGCGGGTATCCTCACATTTCCAAGAATTTATTC TTGACTTTAAAAGGTTCGTCCAGGTACGCCCCGAAAGCTTCGTATAGTAG TCGACTAAGCACGACGAACAAGACGGCGGCGGTTGAACACACGCGCATGG AGCAGATGCCAAGCACGACGCCAAGAGGACAGGGCGAAGTCATCAAGTTC GGAAAAATCAATAAGATTAATGAGGATGTTCCTGAAACTGTTCTTTTATC TAAACCCAACACCAAAGACGTCTCCGCAAGACCTTCCATCACAACCACGA TTTCTACAACAACTACTACAACCTCTGCAACACGAGTCGCGACATCTGCA ACCGACACTAAGAACGTCTCAACAACAACCCCGACAGTTTCAACGACAAC TACGACATCTGTCGTCTCTAGTGTTGTCAGTACCGTCACAGCCTCCTCTA CGACACCTTCCAAGTAACTTGAATCAAAAACAAAAAAGACTGAAGTGAAG ACAGACACGACCGCTTCCACAACACATGTGGCTGTTGCAACCCCATCTTC CACGACCAAAGACAGTAAGGCGGTCGTCGAAGAAACAATCATGAAATCTG TTGCAAATGTTGCTTTATCTGCACCAGGTCGAAAAGAACCAGATCTTAAC AAATTTAAAGATTTTTCACACTCCTTCAAAATTTTGCTATTTTCCAGCGG GTATCCTCACATTTCCAAGAATTTATTCTTGACTTTAAAAGGTTCGTCCA GGTACGCCCCGAAAGCTTCGTATAGTAGTCGACTAAGCACGACGAACAAG ACGGCGGCGGTTGAACACACGCGCATGGAGCAGATGCCAAGCACGACGCC AAGAGGACAGGGCGAAGTCATCAAGTTCGGAAAAATCAATAAGATTAATG AGGATGTTCCTGAAACTGTTCTTTTATCTAAACCCAACACCAAAGACGTC TCCGCAAGACCTTCCATCACAACCACGATTTCTACAACAACTACTACAAC CTCTGCAACACGAGTCGCGACATCTGCAACCGACACTAAGAACGTCTCAA CAACAACCCCGACAGTTTCAACGACAACTACGACATCTGTCGTCTCTAGT GTTGTCAGTACCGTCACAGCCTCCTCTACGACACCTTCCAAGTAACTTGA ATCAAAAACAAAAAAGACTGAAGTGAAGACAGACACGACCGCTTCCACAA CACATGTGGCTGTTGCAACCCCATCTTCCACGACCAAAGACAGTAAGGCG GTCGTCGAAGAAACAATCATGAAATCTGTTGCAAATGTTGCTTTATCTGC ACCAGGTCGAAAAGAACCAGATCTTAACAAATTTAAAGATTTTTCACACT CCTTCAAAATTTTGCTATTTTCCAGCGGGTATCCTCACATTTCCAAGAAT TTATTCTTGACTTTAAAAGGTTCGTCCAGGTACGCCCCGAAAGCTTCGTA TAGTAGTCGACTAAGCACGACGAACAAGACGGCGGCGGTTGAACACACGC GCATGGAGCAGATGCCAAGCACGACGCCAAGAGGACAGGGCGAAGTCATC AAGTTCGGAAAAATCAATAAGATTAATGAGGATGTTCCTGAAACTGTTCT TTTATCTAAACCCAACACCAAAGACGTCTCCGCAAGACCTTCCATCACAA CCACGATTTCTACAACAACTACTACAACCTCTGCAACACGAGTCGCGACA TCTGCAACCGACACTAAGAACGTCTCAACAACAACCCCGACAGTTTCAAC GACAACTACGACATCTGTCGTCTCTAGTGTTGTCAGTACCGTCACAGCCT CCTCTACGACACCTTCCAAGTAACTTGAATCAAAAACAAAAAAGACTGAA GTGAAGACAGACACGACCGCTTCCACAACACATGTGGCTGTTGCAACCCC ATCTTCCACGACCAAAGACAGTAAGGCGGTCGTCGAAGAAACAATCATGA AATCTGTTGCAAATGTTGCTTTATCTGCACCAGGTCGAAAAGAACCAGAT CTTAACAAATTTAAAGATTTTTCACACTCCTTCAAAATTTTGCTATTTTC CAGCGGGTATCCTCACATTTCCAAGAATTTATTCTTGACTTTAAAAGGTT CGTCCAGGTACGCCCCGAAAGCTTCGTATAGTAGTCGACTAAGCACGACG AACAAGACGGCGGCGGTTGAACACACGCGCATGGAGCAGATGCCAAGCAC GACGCCAAGAGGACAGGGCGAAGTCATCAAGTTCGGAAAAATCAATAAGA TTAATGAGGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00039152-exon-sc0002026-1575043694:4839..5064 | TCONS_00039152-exon-sc0002026-1575043694:4839..5064 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1575043694:3207..3259 | TCONS_00039152-exon-sc0002026-1575043694:3207..3259 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1575043694:1421..1580 | TCONS_00039152-exon-sc0002026-1575043694:1421..1580 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1575043694:9..784 | TCONS_00039152-exon-sc0002026-1575043694:9..784 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1510915933:4839..5064 | TCONS_00039152-exon-sc0002026-1510915933:4839..5064 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1510915933:3207..3259 | TCONS_00039152-exon-sc0002026-1510915933:3207..3259 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1510915933:1421..1580 | TCONS_00039152-exon-sc0002026-1510915933:1421..1580 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1510915933:9..784 | TCONS_00039152-exon-sc0002026-1510915933:9..784 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1491911889:4839..5064 | TCONS_00039152-exon-sc0002026-1491911889:4839..5064 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1491911889:3207..3259 | TCONS_00039152-exon-sc0002026-1491911889:3207..3259 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1491911889:1421..1580 | TCONS_00039152-exon-sc0002026-1491911889:1421..1580 | Clytia hemisphaerica | exon |
| TCONS_00039152-exon-sc0002026-1491911889:9..784 | TCONS_00039152-exon-sc0002026-1491911889:9..784 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0002026 | supercontig | sc0002026:9..5064 - |
Blast
The following BLAST results are available for this feature:
|