TCONS_00039126 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039126
Unique NameTCONS_00039126
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2048

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039126 ID=TCONS_00039126|Name=TCONS_00039126|organism=Clytia hemisphaerica|type=transcript|length=2048bp
GTACATGTCAGtccgaaatttttttattcatcttGATTGGAAGATTTTAC
CTTGCCTTGGACCTTGCCATTCACCATTAGACAGCAACCCCTAGTTCATG
ACCCCTGCCTTACTTACTGAGTACTGATGCCACCCACCCAACAGTTCAGT
TGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTCACTCTTTCTGA
GCAGGTAAGATTTATTGACCGAAAAAAAGACCGTAATCGTAGGAATAAAG
ATTACCtaaagcaaacaaagaaaaagataAATGATTGGGGTGTTTAGTGT
AAAGCAACTGTTGGAGTTCTTCATATATACGAAGAGACGCCTCATTATTT
TGgcAATAATCCGCTGATGTCGAACTGTCGAACGATCAGAgagtaaaaga
aattttaaaagaatattgTGAATTTACAGATTGCACTGATGTAGATTTTC
CGAAAAAGGCAAAATTGACTGAAGAAGAAAAGACAAATGACACTGTTCTA
TCCGAGAATTTTGAGAGAGGTGTGTGGAACCGATACCAGAAGTCCCTTAT
TCTTGTGGATGTCACCGTATTGCTGCTTTAAATATAGAATTCGAAAGGCT
GCTGTCATGGACGGAGAATCcaaatgaatttaaaagaaagtttatgAGAT
ATTGgaataaaagttttcaaaatgtagtTTTACAACTGAACGAAGGATGC
TGCAAGAAATCTACATCGTCTATATCTCACCTTTTCAGACCAGACATTat
tgCTATTTTGGAAAACCTGATCAAAGAAATGCTACCAATGGCTGAACCTG
AATTGATACGTAGCTTTATCCTACCCGAGATGATTGTTCGAACGATTTCA
CAGGAATGTAAATGTGCTGTTTTGTCTGTACGGAAAGTTTTACTGGAGAG
AGTTCTAATAATTACAATGCTTCTATATAATACTTATATTATTTCATAGG
TTGCTTAACTCTTATTCGATATTGTAAGCAAGTATAATATTATAAAATAT
TGTTATAAATAATGAATTTCTTATATTCTTGTTATAAGTAAAGAAATGGA
TTTTACGAATTATGATAAAGTCTTTGTTTTAGTACCTAGAGGTTACACTT
GGGTCCATCTGTTACTCGTTTTAATCCAGGGGATAAGAATTTGAAGACCA
AGTATATCCAGGGGGTTGGTGTTAAGAAAAACTCAAGTGCCAAAATAAAC
GCGGAATGGGATGGGAAATTTCCAAAGGAGTAAATAGAAACTCAGCTGTT
AAAAATAGTAATGATTAGGAAATGATATAAAAACAAGCTGTACGGAGCAA
AAGAATAGCGGCTTTGCTTGGTATACTACAGAAATTatttagtcaaaaaa
aaatgaataaggGGAGGTGGAGTCTTAAGAAAGTCGAGGGGGTTGCAACC
CCTCCTCTCACCAACACCGGGTAACTTTTTCCACAGTTTCTTTTTGTTAG
CCTTCCATCTTAGCCTGAAATTTCACCTTAAAAGAAATCAATTGTGCAGT
GGTTGtcaacattgagtttaaagtccgaagggctagagtagaatctctaa
cctttctcaggcaagaaaaagtgaagccttaaaaaatgcgccgtattttt
gacgacagattgaatctagcaattcctttgtttacgattgatattttttt
ctaaatttagcggtaaattttagtttcaatctgtcatttgtgtaaaaaca
aggcgagccgctcaaggccgcgcaactttggtaggattccTGTTACGGGA
GACCAAAGTTTCATTCCCACTTGGCAAAAGAAAACTAACCTTTGCCCTTT
GAGGGATATTGGGTAGTCCAAGGTTGCTTACACGATACTAACTAATAAAA
AAGTGTCCATAGTGTCGTGAGAAAAGGGTGAAAAGGCTTCCTgcaactaa
aacaaaatagaaatagaaaacctacaatgaaaacctaaaatttCGTTCCA
TCATCCATCCATACCAAAGCCCCGAAAATGAATGAGAAAGAGTCGAAATA
CCACACCTTATCCGtcttaaaatatttgaagaagtaTATTGGCCCTAT
Run BLAST on NCBI

transcript from alignment at sc0002020:14355..28685-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039126 ID=TCONS_00039126|Name=TCONS_00039126|organism=Clytia hemisphaerica|type=transcript|length=14331bp|location=Sequence derived from alignment at sc0002020:14355..28685- (Clytia hemisphaerica)
GTACATGTCAGTCCGAAATTTTTTTATTCATCTTGATTGGAAGATTTTAC
CTTGCCTTGGACCTTGCCATTCACCATTAGACAGCAACCCCTAGTTCATG
ACCCCTGCCTTACTTACTGAGTACTGATGCCACCCACCCAACAGTTCAGT
TGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTCACTCTTTCTGA
GCAGGTATGTATGGTATTTAAATTTAGTCTTTCGTTCGAGGAGGACATTT
ACACACACATTTATTTTCTGATATGATACTGATGATGGATCCATTTACAG
AGGATGGCAAGGGGGGTGTGGCCTGTAGGGAGGTCTGAGCAATCAAAGTA
TTCTGATTTGAGGGTAAAGGTAGTCCGGAAGTAAAGTAAAGTAATAAAGT
AAATTTGAATTTAAAAATTTCGGTCGCCAACTGGGCAGGGTATTCTATTT
GCACTTGCACACCCCGTGCAATCGATAGCTAAACAATATTAATCGATCAA
TTCTATTAATTATTCCATAATTGATAGCTAATCGAGGTAAAAAAATTGTG
AATATCGATTAGCTAGGGATTAGCCATCGATCAATATCGCAATATATCGC
TGAGGCCTCAATTACCTCGAGATATTGATTACCTTTCGATATCGATTGTT
ATCGATTACTCATTGATTATTTATAGATAAGTTACCGTGAAGTCGGGTAA
CTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGACTGACCAATC
AAAGCAGCAAAATTTTCAAAACAAATGAACTACGCAGCTTCGCTTGCAGC
TCTACTCTACCATTTTTGTTTTGATTTAACTTTATATTTTAAGGACCAGA
CAGGTCATTCATTAGTGGGCTATGCATGTTAGCCTCCACTGATGCAAATT
ACCCAACTTCACGGTATCTATTATTATCGACCAAGACAGCAATCGATTAT
TTAATAGATCGTATTAGTTACTAATTGATGCAATCGGATAGCTAATATCA
ATATCGATAGCTAATTGAGGACATAAAATATGTGAATATCATATCAATTA
CCGTAAGTTGGTCTAATGTCGACATCCGTCTTCTAATTCCGACATCCTTC
TTTATAGATAGGAATAAGAAAAAGGTTGAAATCACTGATAGACTAAAGAT
TTTTCCTCTCATCGCGCTAATCAAAGTCAATCAATTGAATGATTATGTAG
TCTTGCAGAAAAACAATGATACACCCATGCATAATTATTACAATATGCAT
GAAACAGTAATTATGCATTGCTGTATCATTGTTTGTGTGGCTGGACTACA
TTATTCAACAGGGTTGCCTCTTTGAAAAAAGGTCTATTGAATTCGATTGA
GAAAAAATTGATTGACATCAGGTCGAGTTTAGTTTAGCTGCTTGTCTTTC
AGCCCCCTTTTCCACCCGCACCTTTCCACGCCACCTGCACCTTTCCACAN
CTCTTTGAAAAAAGGTCTATTGAATTCGATTGAGAAAAAAATGATTGACA
TCAGGTCGAGTTCAGTTTAGCTGCTTGTCTTTCAGCCCCCTTTTCCACCC
GCACCTTTCCACGCCACCTGCACCTTTCCTTCTGTGCGTCTGCTCTTCGC
TTGCTGTGTACAGCGAAAAGATAAAAATTACCCGGAATTTGAAACCAATG
ATCCAATCAATCTACCCAATTGGATAAATGGAATTGGTTGGGTAGATTGA
TTGAATAGGTAAATTGATAGGATCATCTCGGTAGATTGATTGGTTCACAG
GTAGATGGATTGGTTCATGGGTAGGTTGATAGGATCATCGGTAGATTGAT
AGGATCATTGGTAGATGGCTTGGATCACCGGTAGATGAATTAGATCATCG
GTAGATCGATAGGATCATCAGTAGATTGATAGGATCATCGGTAGATGGCT
TGGATCACCGGTAGATGGATTGGATCATCCGTAGATTGATAGGATCATCG
GTAAACAGATTGGCTGGGTAGATCAATTGGATGGACGGATCGGTTCAATA
TATTGATTGAATAGGTAGATTAGAGCATTGGTAGATGGATTGGTGCGGTA
GATTGATTGGTTCAAGGGTAGATTGATTGGATCATGGGTAGATTGATAGG
ATCATGGGTAGATTGATAGGATCACGGGTAGATGGATTGGATCATGGGTA
GATGGATTGGATCATGGGTAGATTGATTTGATCATGGGTAGTTGGATTGG
ATCATGGGTGGATGGATTGGATCATGGGTAGATGGATTGGATCATGGGTA
GATGGATTGGACCATGGGTAGATGGTTTGGATCATCCGTGAACAGATTAG
CTGGAATAGATCAATTGGATGGACGGATGGGTTCAATAGATTGATTGAAT
AGGTAGATTAGAGCATTGGTAGATGGATTGATGCGGTAGATTGATTGGAT
CATGGGTAGATGGATTGGATCACCGGGAGATGGATTGGATCACCGGTAGA
TGGATTGGATCACCGGTAGATGGATTGGATCACCGGTAGATGGATTGGAT
CATGGATAGATTGATTGGTTCATGGGTAGATTGATTGGTTCATGGGTAGA
TGGATTGGTTCACGGGTAGATGGATTGGTTCATGGGTAGATGGATTGGAT
CATGGGTAGATGGATTGGATCATGGGTAGGTGGATTGGTTCATGGGTAGG
TGGATTGGTTCATGGGTAGATTGATTGGATCATGGGTAGATTGATAGGAT
CATGGGTAGATGGATTGGATCATGGGTAGATTGATTTGATCATTGGTAGA
TGGATTGGATCATGGGTGGATGGATTGGATAATGGGTAGATGGATTGGAT
CATGGGTAGATGGATTGGACCATGGGTAGATGGATTGGATCATGGGTAGA
TGGATTGGTTCATGGGTGGATGGATTGGATCATGGGTGAATGGATTGGAT
CATGGGTAGATCAATTGGATCATGGGTGGAATGATAGGATCATGGGTAGA
TTGATTGGATCATGGGTAGATTGATTGGATCATGGGTAGATGGATTGGAT
CATGGGTAGATGGATTGGATCACCGGTAGATGGATTGGATCACCGGTAGA
TGGATTGGATCATGGGTAGATGGATTGGATGATGGGTAGATGGATTGGTT
CATGGGTAGATGGATTGGATTACCTGTAGGTGGATTCCATCACTGGTAGA
TGGATTGGATCACCAGTAGATGGATTGGTTCATGGGTAGATGGATTGGAT
CATGGGTAGATGTATTGGTTCACGGGTAGATTGATTGGTTCATGGGTAGA
TGGATTGGATCATAGGTAGATGGATTGAATCACCCGGTAAATGGATAGGA
TCACCGGTAGATGGATTGGTTCATGGGTAGATGGATTAGTTCATGGGTAG
ATGGATTGGATCATGGGTAGATGGATTGGATCATAGGTAGATGGATTGAA
TCACCCGGTAAATGGATAGGATCACCGGTAGATGGATTGGTTCATGGGTA
GATGGATTAGTTCATGGGTAGATGGATTGGATCATGGGTAGATGGATTGG
ATCATAGGTAGATGGATTGAATCACCCGGTAAATGGATAGGATCACCGGT
AGATGGATTGGTTCATGGGTAGATGGATTAGTTCATGGGTAGATGGATTG
GATCATGGGTAGATGGATTGGTTCGTGGTGTAGATGGGTTGGATCTAGGG
TAAGTAAGTAAGTAAGTCTTCGACCGCAGTTGGAGGCGACCCAAAGGCAC
CTCTTTCGATAGCTATCTACCCGAAGGTAGGGGAGGGCACCACTCTTTCT
CCCTGGATCTCTCCACTTACCCTTGATGCTTCCTTTAGTTGCTGAGCATC
AAGCAGAGAGGCATCAAGTACCATTTTGGAAATCTTTGGTATGACCCGGC
TGGGGGTTGAACCCACAACCTTGCGAACCGTAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTAGTTTTACCGAAATTTTCCTCAGAT
TTTTGGTTCTAGACTGGATTAAGTCTATGTAAGGCTGAATCTACCTCGAA
ACCCATATTTGATGTATTTTTATGGATTCTACCAGATTTTTTGGCCTTTT
TCGTCGAATTTTCTTCCTTTCATTGAAATTCAACCTTCTTTTAAATAGNA
TGGGTAGATGGATTGGTTCATGGGTAGATGGATTGGATCATGGGTAGATT
GATTGGATCATGGTGTAGATGGATTGGTTCATGGGTAGATGGATTGGATC
ATGGGTAGATAAATTGGATCATGGGTAGATGGATTGGATCATGGGTAGAT
TGATTGGATCATGGGTAGATTGATTGGANTTAATGACTGAAACAAAAATA
CTGATACATCATGTAATTATGCTTCTGAATAATTTGATTGATAGGTGGAT
TTTTAACATTTTTGAGCACTTTCCAAAAGTAACTTTTATATTCGATCGAG
CATAACTTTTGATCTAATGAATCGAATTCAATAAATGACCCATCAAAATT
TAAGTTTATTTTTCTTCTTTCCAATAAAATAGGAATGGTTCTTTTAAAAT
TTTTAGATTTCGAGAAAATTACTTTTAAAGAGAGAAACTTTTTTGTGGCG
CACCTGGTATATTAAATGAATATCATTGTGTTCAGTCCATGCGCATGTGA
TAGCACAGTATTTTACCCAAATTATATGTTTACTGTCGAGTCATGATCTG
TGCACTTTCTTACTGAGTTTTACATTGAGGCTTTTGTTGACATATGTTCG
TCGGGCTTTAACAATACCTTTGTAAGTATTTAAAACCCTATCAAATGTGT
TCTGCAGACAATTATTATTTTAAATTCGTAGATATTTTACAGTAGCATGC
TTTTAAACTAAACTGCTTATTTTAATAGGCTACAAACTTGTTTTATTTCA
GTGATTTTAACAAATAGCACTATTTAAATTATCCGTCAAACAAAATATGT
CAAATAAACGCAGAGGAAGTAATGGTTCTAATTGGAATAAAAATGTGAGT
TTAATTTATACAAATTGCATCAATATTTTTATCAAAAATGAAGACATGTA
AGCGCGTGCTATGCTTAAGTTTTCGGTAGACGGTATCTACTCGAACCACA
ACTTGAATTAGAAACCTTGTTGTGTGTCTTTAAAACTGGTATGGACAAAT
AGACCTTATTCAATGATGTTCAAATTGCTTTCCAGGTAAGATTTATTGAC
CGAAAAAAAGACCGTAATCGTAGGAATAAAGATTACCTAAAGCAAACAAA
GAAAAAGGTATTAGTTTTGTTAAATTTTGGTTATTTGTATTTTCCTTTTT
AGCTATAATGCAAGAAATAATACAATGATATCTAAATACTCGAATGTTAC
CGTCTCTATGTGTTTTCGTGTATTTTATTGGTTTTACGGAGAAAAGAAAA
AAATAGCTAACAACAACAACAACAACAACAACAGAAAGTCGGTAACTAAG
AATTAAGAACCTAGCTTTAAAAAATTGTCCATTGTTTTTTTTTACAGATA
AATGATTGGGGTGTTTAGTGTAAAGCAACTGTTGGAGTTCTTCATATATA
CGAAGAGACGCCTCATTATTTTGGTAAAATAATAATCTTTTCTCTTGAAT
CTTATAGACACAGATGTCATAATGCAACTGTGTTGATAAATCATAAGTAT
TAGTTTAATGATAAAGTTTTCGTGAACGACAAGAGGCTTATAATGTTTAT
TTTTATTTAGGCAATAATCCGCTGATGTCGAACTGTCGAACGATCAGAGA
GTAAAAGAAATTTTAAAAGAATATTGTGAATTTACAGGTATCTCTTGATT
TATATAAGTTAGAATGCGCATTTATGTTTATCCTTTACACAAATGCTTTA
AATACCAATCAAGGAAAAACAACAACATTTTAGGAGATTGATGTAGATAG
AGAATACGAAAAAAAAAAAGAATTTTCCGTTTCTAGATGAGATGGAAGAA
AAGAAACCTGCTAATACATTTAATGCATCTTCGGAAAAAAGAAAAGGTCA
GGATATGATTTTTTAGAATCACGTTTCCATTATGGTACATGATATCTATC
CATTGACTCCTATTATCTACTTGTCATTGTTCGTTATATAATTGATAAAT
TTGATGTGTCGTTGAATTACATTTTTATACTATTTTTTAGATTGCACTGA
TGTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGAAGAAAAGACAAATG
ACACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAACTGTTGCGAAAAGG
CCTTGGAAATATGGCACATAGTACTCGTCTCTATTGAAACTAACTTTGCT
TGGAAACAATTGAGTCTTGTGCTGCTACTACATGTTTTTATAAACAATGA
AAAATTCAAAATCGGGCTCAGATATGCTTACTTCTAGATCTATCTAATAA
GGTTCAATAAATGCTTCCAGTATGCTTATCACAAAAAATATAATTGTTTT
TTATATTCAAAATTCGAATGTTTATTGTATGTATACTCAAATTCAAAAGT
TTCAAATTTATTATATTCGAATATTTGCTAAAATATTTAAATGGATGGGC
AAGATCGAGCCGCTTTGTCTTTGTTTAGTGAAAACATACAGGCCAAAATA
CAGTGTTGTAAACAATTTTTGAAGGTTTGGTATTATGCTTAGCATATACT
TTAATATTTTCCCTGAGCCAAAACATTTACTACCTCTTTTAGCACTCTTA
GTTAAAATTTGGAACTGAAAAAACTCCATCCTGATAATCTCCTGCTGATA
AAACTATGAAATGAAATTATGATCGCTGGATAGAATGAGCATTTCGGAAA
ATGTTTACACTGAATATGAATTAGATTTTTTAAACCGCTGCATTATATCT
TTTTCCTTATTCAGAAATAGTTTGCTGCACAAAATTTTGCTTGAAACCTA
AATCTTCTAGCGAGGTATACATTTGCAGCAAATGTAAATCTCCCTATCAT
CGCAGGTGTGTGGAACCGATACCAGAAGTCCCTTATTCTTGTGGATGTCA
CCGTATTGCTGCTTTAAATATAGAATTCGAAAGGTGATTCTTTTGTTGGG
AAATCTTTAATCTGTAAATTGTGAAAACTACTTGCAACACAAACTCTTAC
AACCCCATCCTGATAATCTCCTGCTTATAAAACTGTAATTAAAAATATGA
TTGCTGGCTGGATGAAATGAACTTTTCGGAGAATTTTTAATCTTTTAATT
GAATTTTCAGGCTGCTGTCATGGACGGAGAATCCAAATGAATTTAAAAGA
AAGTTTATGAGATATTGGAATAAAAGTTTTCAAAATGTAGTAAGTTACTG
ATTTCTATTTTGTTAGTGAGCTTACCAGAGAAAAATTGAGTACCAGCTAT
TTTTATTCCTCGTGTAACAATGAAATAAGTTTGTATTTGAACCATTAAGT
GAAGGAGATTTAAGTTTTGTACATGTCAAACTTGTGCCGTTTCACTTACA
TTCTGATTCTCCATTATTTCCATGGTTATACTTTTTTCTCATTTTCAGGT
TTTACAACTGAACGAAGGATGCTGCAAGAAATCTACATCGTCTATATCTC
ACCTTTTCAGACCAGACATTGTAAGTATAACCTATCCTATACTCATAGCT
GGCACCCACTCCCCAACTTAAATTGGTTGAGGTAAATCTCAAATTTGCCA
AAAAAGTGGGTGGGGGCTGTTTCACTTTTAAGTTCAGTGGGGCCTAAAAG
AGTGGGTTTAGTAAAGATAGTATTTATTTCATTATGATCAGGATTTTAGG
CCGAAATTATTCACCTTCAAAGTTGTAACACGGCCCCTGAAAAATGTCGG
AGGCACGACCTCTTATTTATTTCCCAAATATATTTCCTGGAAAATTTTAC
CCAAAATGCAATTTCTTTATCCATTGCCCAATTATGACGGACAACAACGT
CTAATGATTTTAATATATATTACTTTGAATTCTGACCTAAAATCATTATT
CTTAGTTTTTGGTGATTATTTTAAGCTGGAAAACAGTGCATGCTTCAGCA
TTGAGGAAAACATCTCCTTTTTTCACTAAAAAATAATTTTGTGTGCAAGG
CAGCGTGTTTTCAAATAGCCTCTACGCAACAATGCAAAATAATAGATAAC
CAACTTGCATTGATCCTCAAAACAAATTTTGAAGCAAGAGCCTTCCGGAG
GTAGTTAGTTATCTATTATTTCTACATCGTTTCTTTACGTGAAGTGCAAA
TTCTTATTGTCACTTCACACGTGGAAAAGAAAGCAAGTCAATTCTCTTAA
GATATTTTTTTGATAAAGTTTAATTATTTTTAGATTTTTAATGACACATG
TGTGAATGTTGAAATGTATGTGATTAACCTTTAACCTTTAGACCTTGTTT
CCAGTCGTTCTTTTTAGATTGCTATTTTGGAAAACCTGATCAAAGAAATG
CTACCAATGGCTGAACCTGAATTGATACGTAGCTTTATCCTACCCGAGGT
AAAAAATTGTACACCTAAAACAACTTTGTATATCCAGTTTAATAAATTTG
AAGGAAGCAGAATGCTGGGTAGCTAAATCACCCATATTCCCAAGCAATAA
ATGCATATCATTAAGCTAGGAAAATAGCCTGTTTTTAACCCAATAGGTCG
AACTTTTTACACATTAGTGGATAACAAGCAGATATTCGATATGTCAAAGT
TGGTTAATAAATCCAATAACCAACAAACATAAAACCTTTTGAATATGTTT
TATTCTATGCAAGGAAAAAACAAAAGAAAAAATCGAAACATTTACAGAAT
AAAAAGTGCTCACAAAATCGAACGTTCGAAAAATCTTTCTCTTTATCAAC
TTTGTAATTACTTTAAATCATGCAAATGTAAAGTAATATAACAATATATC
TAATTTCTTTTCCAGCAAGAGTAAAAAACCATGAAATTTCGAAAATTTGG
AGTAAAAGAATTTGCCGTTGAATAATAGCCATGAAATATCGGTAATTATT
CAACGGCTGTAATAATACAATTTAAAACAATATTATAATATAATCTGATT
GCTTACGGAAGCCCTGAGCGGCCACAACGACACCAATATTCCAAACTCTC
ACAACAATACTTAAAACGTTTACAATAACATCCAAATTCTCATAACAATA
TCAAAATTTTGACAACAATATGAAAACTCAGAAAGAATCTAAAGCACTTT
CTCTCGCAGTGATGTTTTTACGTCTTGTTGACGATGAAAAATCTTCCATT
AGGACAGTGCCTTAAGTTTCTAAACACTAGTCTAAATGTAGCTAAATATT
TCACGTGGTGAGAGATTTGTTACATTAAAATTACAAGAGAGTCTGATAGT
TGTCCCTTTCANAGAAAGATAGACTTAAATTTTGATGGGTCATTTATTAA
ATTCAATACTCTAGTCTAAATGTAGCTAAATATTTCACGTGGTGAGAGAT
TTGTTACATTAAAATTACAAGAGAGTCTGATAGTTGTCCCTTTATAATTG
ATAGGAAAAAAGTTATCCATTAAGTATAGAGTTGGTAAGCATCTGGTGTA
CAAAAGGCTTCAATTTCTGGTGTACAAAAGGTTCCGATTTCCAGAAAAAC
CATAAGTACCATAAGCTTTATGGACGGTATGGACCAGCTTCTAAGATCGT
ATAGAAAATACTTGCAAATAAGGTGACTGTGGTGCAGTCTCTTCCCCACA
TTCTATGCAGTACTTTTCATCGTGGATTTCTCCACGGCACTCCATGACGA
CTATTACCAGACTATCTGTAATTTTATTTTAACACAAGGTAGCATGTGTG
TAAATTGTTATCGTTGTGCTCACTCTTCTGTAATTGCTAGATTGCTCTAA
TTATCAATCGCTTTTGTTCTTTTAGATGATTGTTCGAACGATTTCACAGG
AATGTAAATGTGCTGTTTTGTCTGTACGGAAAGTTTTACTGGAGAGAGTT
CTAATAATTACAATGCTTCTATATAATACTTATATTATTTCATAGGTTGC
TTAACTCTTATTCGATATTGTAAGCAAGTATAATATTATAAAATATTGTT
ATAAATAATGAATTTCTTATATTCTTGTTATAAGTAAAGAAATGGATTTT
ACGAATTATGATAAAGTCTTTGTTTTAGTACCTAGAGGTTACACTTGGGT
CCATCTGTTACTCGTTTTAATCCAGGGGATAAGAATTTGAAGACCAAGTA
TATCCAGGGGGTTGGTGTTAAGAAAAACTCAAGTGCCAAAATAAACGCGG
AATGGGATGGGAAATTTCCAAAGGAGTAAATAGAAACTCAGCTGTTAAAA
ATAGTAATGATTAGGAAATGATATAAAAACAAGCTGTACGGAGCAAAAGA
ATAGCGGCTTTGCTTGGTATACTACAGAAATTATTTAGTCAAAAAAAAAT
GAATAAGGGGAGGTGGAGTCTTAAGAAAGTCGAGGGGGTTGCAACCCCTC
CTCTCACCAACACCGGGTATACCGGGTTTGTATATTGGCCCTATATATGG
GTTCATTCTTTACTATAGGGGATAAATTTGCCTCGAAATGTTCAATCTCG
GAAAGGAGTCGAAATACCACACCTTATCCGTCTAAAATATTCGAAGAAGT
ATATTGGCCCTATATATGGGTTCATTCTTTACTATAGGGGATAAATTTGC
CTCGAAATGTTCAATCTCGGAAAGGAGTCGAAATACCACACCTTATCCGC
GCCTAAAATATTTGAAGAAGTATATTGGCCCTATATATGGGTTCATTCTT
TATTATAGGGGGTAAATTTGCCTCGAAATGTTCAATCTCGGAAAGGAGTC
GAAATACCNAAATGTTCAATCTCCGAAAGGAGTCGAAATACCACACCTTA
TCCGTCTAAAATATTCGAAGAAGTATATTGGCCCTATATATGGGTTCATT
CTTTATTATAGGGGATAAAGTTGCCTCGAAATGTTCAATCTCAGAAAGGA
GTCGAAATATCACAACTTATCCGTCTGAAATATTTGAAGAAGTATATTGG
CCCTACATATGGGTTCATTCTTTACTATAGGGGATAAATTTGCTNCCTTA
TCCGTCTAAAATATTTGAAGAAGTATATTGGCCCTACATATGGGTTCATT
CTTTGCTATAGGGGATAAATTTGCCTCGAAATGTTCAATCTCGGAAAGGA
GTCGAAATACCACACTTTATCCGACTCAAAAGGCTTTAATTTGGGTCAAA
TTATTCCTCAAAACAAAATTTTCAAATTGCGGCTTCATTCTCTTGAATTC
GGTAAATAGCCGTCTGCTATATAGAAAATGACTCTAAAGGCTCACATTTG
GCTCAAATCATTCCTCAATTTTTTTCATTGCGGATCAGATAGCGCTCTGT
TATATTAGAGTCGGGACGAATGAATAGAGAAGAAGTGAATAGCTTTTAGC
ATATCGAGCTGCTTAATTTCGAATAATAAATAAAATNATTCCTCAATTTT
TTTCATTGCGGATCAGATAGCGCTCTGTTATATTAGAGTCGGGACGAATG
AATAGAGAAGAAGTGAATAGCTTTTAGCATATCGAGCTGCTTAATTTCGA
TCTTTACCTCCAATTACACAAGAATAAAATAAAACAAAACTCTGATTAAC
ATAATAATCGATAAAATATAGAAACGATAATCAAACATCTCAATCGGTTC
ATGTGAAAAAATAAATCAGACCTGAAATAGATACAAACCGTCTTTTGCAT
TTGAAATTCCTTAAAAATTGAAAGGCCTAAATTCATTACTTAGCGAACTC
TAACCAATAGGTATTCTTTGAAGAAACAGGAAGAAAAGTGAATTTTATTT
ACCTAGTCCGAAGAAATTAGAAGTTTTAACTAATGAAAAATAATTGACAG
TGAAACAACTCTATCAGCAGTGTTGATTATCATTTTTAATTTTTACATGA
TAATACTCTACTCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNACGGAGCAAAAGAATAGCGGCTTTGCT
TGGTATACTACAGAAATTATTTAGTCAAAAAAAAAATGAATAAGGGGAGG
TGGAGTCTTAAGAAGGTCGAGGGGGTTGCAACCCCTCCTCTCACCAACAC
CGGGTAACTTTTTCCACAGTTTCTTTTTGTTAGCCTTCCATCTTAGCCTG
AAATTTCACCTTAAAAGAAATCAATTGTGCAGTGGTTGTCAACATTGAGT
TTAAAGTCCGAAGGGCTAGAGTAGAATCTCTAACCTTTCTCAGGCAAGAA
AAAGTGAAGCCTTAAAAAATGCGCCGTATTTTTGACGACAGATTGAATCT
AGCAATTCCTTTGTTTACGATTGATATTTTTTTCTAAATTTAGCGGTAAA
TTTTAGTTTCAATCTGTCATTTGTGTAAAAACAAGGCGAGCCGCTCAAGG
CCGCGCAACTTTGGTAGGATTCCTGTTACGGGAGACCAAAGTTTCATTCC
CACTTGGCAAAAGAAAACTAACCTTTGCCCTTTGAGGGATATTGGGTAGT
CCAAGGTTGCTTACACGATACTAACTAATAAAAAAGTGTCCATAGTGTCG
TGAGAAAAGGGTGAAAAGGCTTCCTGCAACTAAAACAAAATAGAAATAGA
AAACCTACAATGAAAACCTAAAATTTCGTTCCATCATCCATCCATACCAA
AGCCCCGAAAATGAATGAGAAAGAGTCGAAATACCACACCTTATCCGTCT
TAAAATATTTGAAGAAGTATATTGGCCCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023566XLOC_023566Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039126-exon-sc0002020-1575043694:28482..28685TCONS_00039126-exon-sc0002020-1575043694:28482..28685Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:21779..21850TCONS_00039126-exon-sc0002020-1575043694:21779..21850Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:21463..21538TCONS_00039126-exon-sc0002020-1575043694:21463..21538Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:21249..21325TCONS_00039126-exon-sc0002020-1575043694:21249..21325Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:20806..20895TCONS_00039126-exon-sc0002020-1575043694:20806..20895Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:20003..20080TCONS_00039126-exon-sc0002020-1575043694:20003..20080Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:19747..19825TCONS_00039126-exon-sc0002020-1575043694:19747..19825Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:19466..19537TCONS_00039126-exon-sc0002020-1575043694:19466..19537Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:18588..18668TCONS_00039126-exon-sc0002020-1575043694:18588..18668Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:16658..17210TCONS_00039126-exon-sc0002020-1575043694:16658..17210Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1575043694:14355..15020TCONS_00039126-exon-sc0002020-1575043694:14355..15020Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:28482..28685TCONS_00039126-exon-sc0002020-1510915933:28482..28685Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:21779..21850TCONS_00039126-exon-sc0002020-1510915933:21779..21850Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:21463..21538TCONS_00039126-exon-sc0002020-1510915933:21463..21538Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:21249..21325TCONS_00039126-exon-sc0002020-1510915933:21249..21325Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:20806..20895TCONS_00039126-exon-sc0002020-1510915933:20806..20895Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:20003..20080TCONS_00039126-exon-sc0002020-1510915933:20003..20080Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:19747..19825TCONS_00039126-exon-sc0002020-1510915933:19747..19825Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:19466..19537TCONS_00039126-exon-sc0002020-1510915933:19466..19537Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:18588..18668TCONS_00039126-exon-sc0002020-1510915933:18588..18668Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:16658..17210TCONS_00039126-exon-sc0002020-1510915933:16658..17210Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1510915933:14355..15020TCONS_00039126-exon-sc0002020-1510915933:14355..15020Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:28482..28685TCONS_00039126-exon-sc0002020-1491911889:28482..28685Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:21779..21850TCONS_00039126-exon-sc0002020-1491911889:21779..21850Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:21463..21538TCONS_00039126-exon-sc0002020-1491911889:21463..21538Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:21249..21325TCONS_00039126-exon-sc0002020-1491911889:21249..21325Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:20806..20895TCONS_00039126-exon-sc0002020-1491911889:20806..20895Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:20003..20080TCONS_00039126-exon-sc0002020-1491911889:20003..20080Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:19747..19825TCONS_00039126-exon-sc0002020-1491911889:19747..19825Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:19466..19537TCONS_00039126-exon-sc0002020-1491911889:19466..19537Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:18588..18668TCONS_00039126-exon-sc0002020-1491911889:18588..18668Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:16658..17210TCONS_00039126-exon-sc0002020-1491911889:16658..17210Clytia hemisphaericaexon
TCONS_00039126-exon-sc0002020-1491911889:14355..15020TCONS_00039126-exon-sc0002020-1491911889:14355..15020Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002020supercontigsc0002020:14355..28685 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0986329	0.243773	0.231989	0.392833	1.0028	0	0	0.775048	0.329598	0	0.914341	0	1.08102	0	0.0033113	0.132846	0	0	0.329341	0	0	0.334675	0.249274	0	0.947669	1.59505e-09	0	0	0.481802	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039126 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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