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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039106 ID=TCONS_00039106|Name=TCONS_00039106|organism=Clytia hemisphaerica|type=transcript|length=975bp
CTCAGATGTAACACGTGTAGAGGATGCTGAACTTCAAAGGTTGAAAAGAT
TCTAAtgagatgaaatgaaaaatcgaaaacAAGAAATCTTTTGTGTGTCG
ATATCATTTGGTAATATATATTTTCATGATTGGTTTcaacttaaaaaaaa
tctattcaatcacatagaaaaagaaaaaaacaataatatctGAATAAAAC
TTATACTGTATTGCCCCAAATCCTAAGtccctaaaaataagaaaataatt
ctATAAAAATTGAGACAGCACAGTAAATTGGAAATATTCAAGACACAATT
ATGACAACAAGAGAGCGAGAAATCCATCCTTTTGTCAAAGGCAAAAGTAT
TCTAAAGTTGCGTAGATGAGAAACCTTACAGCCTCATAGTTAATGTAAGC
TTTGAGATACAGGTACTAGACAAGAAATGATACCTTAAAGGCGGagtgac
tgaaaaaaaatatgtacacAGAAAtactttaataataataaattaataaa
agaaaaagttttattgaaacAAGAATCAGAAATTCAATAACACAAAAGCT
GAAACCTCTCGAGACTTTGGAGATTATGTACAAGGTTAAAAATTTAGATA
CATATTACCATAATGTAAGAAATTATGATTCTTATTTCTTCGTATCAAAT
ATTCACAATTTATCGCCTTAAAATGACATTGAATCTATTCCATATAAAGG
aaccaaaaaatatataatatacaCTTTTAGCCATAAAAGCCCAAAGCATA
CtctataatatataataatggGGCAAAATGTTGTGACAAGGGCATCTTTT
TAAGGATTTAGACCCTTCGTATGACAACGTTAAGCCTGGGTAAGCAAGGT
TCCCATCTGAGTAATTTAAATAAAGATANAGTCCCACCTCAACCTATTTC
CCCCACCTGAAAGTCCAAAATTTCAGACTCCCACCTGGCTGTTTTGGACC
CAAAAATCCAAACCCCCCCCTGCAG Run BLAST on NCBI transcript from alignment at sc0002015:928..1902 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039106 ID=TCONS_00039106|Name=TCONS_00039106|organism=Clytia hemisphaerica|type=transcript|length=975bp|location=Sequence derived from alignment at sc0002015:928..1902 (Clytia hemisphaerica)
CTGCAGGGGGGGGTTTGGATTTTTGGGTCCAAAACAGCCAGGTGGGAGTC
TGAAATTTTGGACTTTCAGGTGGGGGAAATAGGTTGAGGTGGGACTNTAT
CTTTATTTAAATTACTCAGATGGGAACCTTGCTTACCCAGGCTTAACGTT
GTCATACGAAGGGTCTAAATCCTTAAAAAGATGCCCTTGTCACAACATTT
TGCCccattattatatattatagaGTATGCTTTGGGCTTTTATGGCTAAA
AGtgtatattatatattttttggttCCTTTATATGGAATAGATTCAATGT
CATTTTAAGGCGATAAATTGTGAATATTTGATACGAAGAAATAAGAATCA
TAATTTCTTACATTATGGTAATATGTATCTAAATTTTTAACCTTGTACAT
AATCTCCAAAGTCTCGAGAGGTTTCAGCTTTTGTGTTATTGAATTTCTGA
TTCTTgtttcaataaaactttttcttttattaatttattattattaaagt
aTTTCTgtgtacatattttttttcagtcactCCGCCTTTAAGGTATCATT
TCTTGTCTAGTACCTGTATCTCAAAGCTTACATTAACTATGAGGCTGTAA
GGTTTCTCATCTACGCAACTTTAGAATACTTTTGCCTTTGACAAAAGGAT
GGATTTCTCGCTCTCTTGTTGTCATAATTGTGTCTTGAATATTTCCAATT
TACTGTGCTGTCTCAATTTTTATagaattattttcttatttttagggaCT
TAGGATTTGGGGCAATACAGTATAAGTTTTATTCagatattattgttttt
ttctttttctatgtgattgaatagattttttttaagttgAAACCAATCAT
GAAAATATATATTACCAAATGATATCGACACACAAAAGATTTCTTgtttt
cgatttttcatttcatctcaTTAGAATCTTTTCAACCTTTGAAGTTCAGC
ATCCTCTACACGTGTTACATCTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039106-exon-sc0002015-1491911889:928..1902 | TCONS_00039106-exon-sc0002015-1491911889:928..1902 | Clytia hemisphaerica | exon |
| TCONS_00039106-exon-sc0002015-1510915933:928..1902 | TCONS_00039106-exon-sc0002015-1510915933:928..1902 | Clytia hemisphaerica | exon |
| TCONS_00039106-exon-sc0002015-1575043694:928..1902 | TCONS_00039106-exon-sc0002015-1575043694:928..1902 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002015 | supercontig | sc0002015:928..1902 . |
Blast
The following BLAST results are available for this feature:
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