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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039098 ID=TCONS_00039098|Name=TCONS_00039098|organism=Clytia hemisphaerica|type=transcript|length=910bp
CAAAGAAGATCCAATAACAAAGAAAACTCCTGGTAAAGAGCTGCATCCCT
TTGATCCTCGCATCATTTGTGCTGGTCATCCAAGATATGAAGGACCTCGT
GACCATACTCGGATGCTGAATCACATCAAAACTTTACTGATCTCCTGGCA
GGCAAATTGTGACTGCCAGGCCCTCATCGATCAGGATCTTTTGAACTTGG
TAAAGTATATCTGCTCTTACTGTTGCAAAGGTGCAACCACTACAGAAGAG
TTTGTGACCATTTATCGTGAGTTGTTGGATTCTGCTGATATCAGCACAAC
TGTGAAGAATGTTGCCCATCGATTGCTGATGAAGATTGTCGGTATAGTAG
ATGTTCCTGCTGCTGCGGCCGATTTTATAAATACTGGTGGTCAACTTTAT
CATTCAACAAACAATATCCAAAGGGTTGGATTGAGTGGCTATCGCCAATT
AAACAGTAAAGGCCCTAACAGTGATGAAAATGCTACTCTGGAGACACCCT
TAGACAAGTTTCTAAGTGAAAAGCGTCGCGAAGAAGACCCTGAGATTACT
CTCTATGATTGGGCCAAAACATGCAGATGTAAAGTTCGATGTGGACGTGA
CCATGTTCCCCTATTCACTGGTACAGCTGTCAAACCAATTTGGCCGCTGT
CTGAAGACTGTTGCAAAGCCCAGTTAATGATTTATTCAAAAGGCACGTGG
GAAACACCAGAGGATTTAAAAGATCAAGATGAACAGTTTTCGGATGCCCT
CGCCGCTTTCCTCAATGATGATCCTGACTGCCCTGAATTCTTGAAGGAAA
TAATTGCTTTGTCAAAGAAAAAATACGACAAGAAAGAAGAGAGAGATCTG
CGAAGAAACAGAAATGTTAATGCGGATGAAGTTGATGAAAATCGTGATGT
ACAACTCAGT Run BLAST on NCBI protein sequence of TCONS_00039098-protein >TCONS_00039098-protein ID=TCONS_00039098-protein|Name=TCONS_00039098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
KEDPITKKTPGKELHPFDPRIICAGHPRYEGPRDHTRMLNHIKTLLISWQ
ANCDCQALIDQDLLNLVKYICSYCCKGATTTEEFVTIYRELLDSADISTT
VKNVAHRLLMKIVGIVDVPAAAADFINTGGQLYHSTNNIQRVGLSGYRQL
NSKGPNSDENATLETPLDKFLSEKRREEDPEITLYDWAKTCRCKVRCGRD
HVPLFTGTAVKPIWPLSEDCCKAQLMIYSKGTWETPEDLKDQDEQFSDAL
AAFLNDDPDCPEFLKEIIALSKKKYDKKEERDLRRNRNVNADEVDENRDV
QLS Run BLAST on NCBI transcript from alignment at sc0002012:8507..9416 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039098 ID=TCONS_00039098|Name=TCONS_00039098|organism=Clytia hemisphaerica|type=transcript|length=910bp|location=Sequence derived from alignment at sc0002012:8507..9416 (Clytia hemisphaerica)
ACTGAGTTGTACATCACGATTTTCATCAACTTCATCCGCATTAACATTTC
TGTTTCTTCGCAGATCTCTCTCTTCTTTCTTGTCGTATTTTTTCTTTGAC
AAAGCAATTATTTCCTTCAAGAATTCAGGGCAGTCAGGATCATCATTGAG
GAAAGCGGCGAGGGCATCCGAAAACTGTTCATCTTGATCTTTTAAATCCT
CTGGTGTTTCCCACGTGCCTTTTGAATAAATCATTAACTGGGCTTTGCAA
CAGTCTTCAGACAGCGGCCAAATTGGTTTGACAGCTGTACCAGTGAATAG
GGGAACATGGTCACGTCCACATCGAACTTTACATCTGCATGTTTTGGCCC
AATCATAGAGAGTAATCTCAGGGTCTTCTTCGCGACGCTTTTCACTTAGA
AACTTGTCTAAGGGTGTCTCCAGAGTAGCATTTTCATCACTGTTAGGGCC
TTTACTGTTTAATTGGCGATAGCCACTCAATCCAACCCTTTGGATATTGT
TTGTTGAATGATAAAGTTGACCACCAGTATTTATAAAATCGGCCGCAGCA
GCAGGAACATCTACTATACCGACAATCTTCATCAGCAATCGATGGGCAAC
ATTCTTCACAGTTGTGCTGATATCAGCAGAATCCAACAACTCACGATAAA
TGGTCACAAACTCTTCTGTAGTGGTTGCACCTTTGCAACAGTAAGAGCAG
ATATACTTTACCAAGTTCAAAAGATCCTGATCGATGAGGGCCTGGCAGTC
ACAATTTGCCTGCCAGGAGATCAGTAAAGTTTTGATGTGATTCAGCATCC
GAGTATGGTCACGAGGTCCTTCATATCTTGGATGACCAGCACAAATGATG
CGAGGATCAAAGGGATGCAGCTCTTTACCAGGAGTTTTCTTTGTTATTGG
ATCTTCTTTG Coding sequence (CDS) from alignment at sc0002012:8507..9416 >TCONS_00039098 ID=TCONS_00039098|Name=TCONS_00039098|organism=Clytia hemisphaerica|type=CDS|length=909bp|location=Sequence derived from alignment at sc0002012:8507..9416 (Clytia hemisphaerica)
ACTGAGTTGTACATCACGATTTTCATCAACTTCATCCGCATTAACATTTC
TGTTTCTTCGCAGATCTCTCTCTTCTTTCTTGTCGTATTTTTTCTTTGAC
AAAGCAATTATTTCCTTCAAGAATTCAGGGCAGTCAGGATCATCATTGAG
GAAAGCGGCGAGGGCATCCGAAAACTGTTCATCTTGATCTTTTAAATCCT
CTGGTGTTTCCCACGTGCCTTTTGAATAAATCATTAACTGGGCTTTGCAA
CAGTCTTCAGACAGCGGCCAAATTGGTTTGACAGCTGTACCAGTGAATAG
GGGAACATGGTCACGTCCACATCGAACTTTACATCTGCATGTTTTGGCCC
AATCATAGAGAGTAATCTCAGGGTCTTCTTCGCGACGCTTTTCACTTAGA
AACTTGTCTAAGGGTGTCTCCAGAGTAGCATTTTCATCACTGTTAGGGCC
TTTACTGTTTAATTGGCGATAGCCACTCAATCCAACCCTTTGGATATTGT
TTGTTGAATGATAAAGTTGACCACCAGTATTTATAAAATCGGCCGCAGCA
GCAGGAACATCTACTATACCGACAATCTTCATCAGCAATCGATGGGCAAC
ATTCTTCACAGTTGTGCTGATATCAGCAGAATCCAACAACTCACGATAAA
TGGTCACAAACTCTTCTGTAGTGGTTGCACCTTTGCAACAGTAAGAGCAG
ATATACTTTACCAAGTTCAAAAGATCCTGATCGATGAGGGCCTGGCAGTC
ACAATTTGCCTGCCAGGAGATCAGTAAAGTTTTGATGTGATTCAGCATCC
GAGTATGGTCACGAGGTCCTTCATATCTTGGATGACCAGCACAAATGATG
CGAGGATCAAAGGGATGCAGCTCTTTACCAGGAGTTTTCTTTGTTATTGG
ATCTTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039098-exon-sc0002012-1491911889:8507..9416 | TCONS_00039098-exon-sc0002012-1491911889:8507..9416 | Clytia hemisphaerica | exon |
| TCONS_00039098-exon-sc0002012-1510915933:8507..9416 | TCONS_00039098-exon-sc0002012-1510915933:8507..9416 | Clytia hemisphaerica | exon |
| TCONS_00039098-exon-sc0002012-1575043694:8507..9416 | TCONS_00039098-exon-sc0002012-1575043694:8507..9416 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002012 | supercontig | sc0002012:8507..9416 . |
Blast
The following BLAST results are available for this feature:
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