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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039069 ID=TCONS_00039069|Name=TCONS_00039069|organism=Clytia hemisphaerica|type=transcript|length=371bp
AATCAATTTCATATTTCCACTCTCCAGGATCCTCCATCTCCAATGAAGAT
GACGATTGTCAAGTGATAGAGCCAATTCCAAATCAACgatCTTCAAGTTC
GAGGGGCGATGGCGATTGTCAAGTGATAGAAACGAGTACAGTCAAAAATG
AAAGAAAGTGCTCAGAAGACATGGCTTATCTAAATGACGACAAACGATAC
CCTTTATGGAAATCAAGCAAATGTCCTTTAGATACTTTACCAGTGGCTGA
TAGATGATAAAACAATGAGGTATTCTTACCCAAAGTAAATCGTGAAGAAT
GCACCAAACAATGGAGAACAAGTACGAAAAATCGATATTATTGTGTCAAA
CTTTCATGCATATTGTCGANN Run BLAST on NCBI transcript from alignment at sc0002005:10289..11173- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039069 ID=TCONS_00039069|Name=TCONS_00039069|organism=Clytia hemisphaerica|type=transcript|length=885bp|location=Sequence derived from alignment at sc0002005:10289..11173- (Clytia hemisphaerica)
AATCAATTTCATATTTCCACTCTCCAGGATCCTCCATCTCCAATGAAGAT
GACGATTGTCAAGTGATAGAGCCAATTCCAAATCAACGTAAGTCTGAAAT
ATCATACTCGATGTAGAAATTTTCTTCTGACACCCCGCGCTTTAAAGCTC
ATGAAAATTTTAACATTTGGAAGGTTAAGGTTACATCATTTGAGAAGACC
CTACATTTAAAGCTGGACTGGGTTTTAGTCATCTTTAACCGCCATCTTTA
ATATATGCAGTAAGTATACTATAAAACCAGACAAGTATTTTTCAAAACAA
GCCAGACCAGATAGGGACTAGACTCCTGGACTCACTTCATACTTTCATTT
TTAGGATCTTCAAGTTCGAGGGGCGATGGCGATTGTCAAGTGATAGAAAC
GAGTACAGTCAAAAATGAAAGTAAGTATAGTCTCATTAACTTGCATTTGG
GTACAGAAAACATTTTGTACATCTTATTTATAACTACTCTGTTATATTAC
CTGCAGAGGTAGGCATAAAGAAATCTTTGAAATTTTTTTCCTCAAATCTT
AGTATATTTTTGAAAATTTAAATACGTACTTTTAATAAGTAAAGTAGCGC
GCACCCTGAGATGAGATTTTTGCTTTAAAAAGTTATAAGGGATTACTTTC
ACTTTTACAAATTTTAGGAAAGTGCTCAGAAGACATGGCTTATCTAAATG
ACGACAAACGATACCCTTTATGGAAATCAAGCAAATGTCCTTTAGATACT
TTACCAGTGGCTGATAGATGATAAAACAATGAGGTATTCTTACCCAAAGT
AAATCGTGAAGAATGCACCAAACAATGGAGAACAAGTACGAAAAATCGAT
ATTATTGTGTCAAACTTTCATGCATATTGTCGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039069-exon-sc0002005-1575043694:11087..11173 | TCONS_00039069-exon-sc0002005-1575043694:11087..11173 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1575043694:10754..10819 | TCONS_00039069-exon-sc0002005-1575043694:10754..10819 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1575043694:10289..10506 | TCONS_00039069-exon-sc0002005-1575043694:10289..10506 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1510915933:11087..11173 | TCONS_00039069-exon-sc0002005-1510915933:11087..11173 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1510915933:10754..10819 | TCONS_00039069-exon-sc0002005-1510915933:10754..10819 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1510915933:10289..10506 | TCONS_00039069-exon-sc0002005-1510915933:10289..10506 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1491911889:11087..11173 | TCONS_00039069-exon-sc0002005-1491911889:11087..11173 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1491911889:10754..10819 | TCONS_00039069-exon-sc0002005-1491911889:10754..10819 | Clytia hemisphaerica | exon |
| TCONS_00039069-exon-sc0002005-1491911889:10289..10506 | TCONS_00039069-exon-sc0002005-1491911889:10289..10506 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002005 | supercontig | sc0002005:10289..11173 - |
Blast
The following BLAST results are available for this feature:
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