TCONS_00039059 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039059
Unique NameTCONS_00039059
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2971

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039059 ID=TCONS_00039059|Name=TCONS_00039059|organism=Clytia hemisphaerica|type=transcript|length=2971bp
cTGGAATAGTAATTTCCAAAAATCTAAAACATCCATGATGATCACCCCTA
ATCTAAAATTAGACAAACCTGGTTGCTGAAGTACTTTAGAGATTGCAGGG
AAATCCAAAACGTATTGCAGGAGGCGTACTTTGATTCTCACGGGTGCTTC
CATATATCCCGGGTGGAAAGTTTGACAATCTGAAAGTACCATTAGTTCAT
CAACCAAAATTTCGAAATAGGGATCCACGTGGAAGGCTTCCTTTCTGCCG
TTGCCAGGGATAGTTCCAAAAAGCATAATGCCACCAACAGATTTTCGCAG
AGCGGGCGGAGAATTAAGGATCGATAACATCAGTGGCCACATCGAGTAGA
CGTGGTGCATCGTTTTGAACGGGTTGACACCATCACTGCAAAAATTTAAA
ACCACGCCGTCGTCATCACCTTTAAACTCTCCATCCTCGTCAAACCAATT
CTCCCATCTGCTGGTATCCCATATGTCACGCAAATATCCATCCTTCGGGC
GGGTAGTATGAGCCTGCAATATGCGCACCAAGTTTTCATTTTGATACAAA
CGGGCGATTCGCGGTCCGATAGGAAAGTATTTGAATGTTTTGGATTTGGT
TTTACTACTTCCACACTTCGGACACGTTTTAGCAGAAGAGAGTTCATTTC
TAAAAACCACGCAGTCCTTTTCACACGCCTTGAAAGTCTGGATCGGTATA
AGAAAGTCTTTGATCTTGGCTTTTGCCTCTTCATAAGATGAACAAGATTC
GTTGGGTTTGGGTAATTTAAAAAGTTTATCGTTGCGAAAGCTCTCAGAAA
CAGTTGCCTTAGCATAGCTAGGATGCGAAACAAATTTACGAAACTCCAAA
AAGATATGGTCTAAGACGGAGATATCAGCATCAAGGAAAAGAGGTGTCTT
AGCTGCTGGATGGGTTTCAAAAAGTCCAGGGTAATACGGACAGTCAATGT
TTTGAGTTTCAAGAGGTGCTGTGGTTTTTTGAATGGCATATGAAGCATCA
GTTTTTGCATGGCGATAAATTGTCTTTGATGAACGGATCGCTCCATTACA
CCGATAGCTAGTGCAGTTACACGGTCTACCTGAAATTGAAAAGAAGTAAA
TAATTTGTTTGCTTTGTTTGTAACAACCACAACCGGGGGTACTCTTGCCG
ACCGACAAGATTGCTTCGCTGCTGAAAATTGGACTGACATTTTAAATTTT
CAATTTTTACCAAAACAAAGGCGCATGGAGGTTAAAAATGATACACTCTG
AATGAACAGTACATGCCCCAGGGAGTGTCAATAAAAAGAATTACGAACGC
TGATTGGTTTTTTAATACTTATGACCAAATATGGTCAACGGATATTTTAC
AAAAGATCGTAAGCCCACATTCGATCAAAATTGCTTCAAGAACGACAGTT
ATTCAGTTGGTAAACAAAACACATTGTCGACAACACGATGCCACTTCATT
AAAGTTAAGTAAAATTTTCTTACCTCCTGCAAGTCTTGAATTCATTCTTT
CAAAGTGAAAATTATTTTTCTGAGTACAATAAATCTTATGATTTTCATTA
ACCAGTGAACCACCAATACGAATCTTTGGAGGGAAATGATTAATTTGCTT
TTTGTGAGTCCTTATAAAATGTTTTCACTTTAGAACAAAATCTTGGGGGG
AAATAATTTTTCGAACAAAATTATAGGATTTCAATATTTTTTCGAGCTAA
AGTATAGGCAGTCAATAATTTTTCGAGCAAAAATATAGGCAGTCAATAAT
CTTTCGAACGAAATTATAGTTAGTCAATATTTTTTCGAACGAAATTATAG
GTAGTCAATATTTTTTCGAACGAATATTGCCAGACAATATATTTTCGAAT
TTTTATCGTTCGATTCATCGAAAATATTCTTGAGATCTTATTCATTATTC
TTCATTTTTGTTCATACCGAGATTGGAAGCAGCCATGTCATCAGCCAGTG
CCACCGGGAATGGAAACATTTTGATAACACCTCCGGGCAAAGATTTCGAA
CATAATAGTATGCAACAGCAAAATTGGTATTTTCCATCCTTTCATCATCC
AACAAGATTTCCTTCGCCATTTACACCTACGCACTACAATTCACACAATT
TTACAAACTTATTCCCGCCGCAAACTTCAAACGCTACAGCTACAGACCAT
ACCGAACCAACCGAACTAACAGAACCATCCGAAGTATCCGAACCATCCAC
CGAACAATCTACCGCTCAAGACCCACACACCAATGAAGCACCATCATACG
CATTTCTTTTAAATTTTTATAACCAATGGAAGGACACAGTACCACTCTGC
CAATGCAACAGAAAATCTTACGTGCTTCAGGACTATTTCGACAGAAGAAG
GCCAGATTATTCTGCTGCCCATACACTTTATTTGAATGTTGCCAAGAAAG
CGATTGAAAAATTCCAACTGACAGCTAGCAAGAACAAGCTTCAAAAGATG
AATGCAGTTTATTGGATGATCCGCGTACTAAAGCACGACAACGACGCCAC
CACGTACCAAACCCTCAACGAGAAGCTATCGTTATTATTGGCTGGACAAA
AAAGTCAATCTAAGCTAAAGAGAGAAGCAGAGGAAAAAGGCTTCAAATCG
GTGAACGAATACAAAAAGAAGAAACCAAAGAGGGTAAAAAAGACCACTGC
GCAACCAGATCAACTAGAACCAGAACCAGAACACCCAAGCATCGAAGACA
TCGCTGAATCGATCATATCGGCAAATTATCCTCCGAAAATTGAAAAGCAT
AGTTATGTTGTTGTGGCATGGGAGAGGCAAATGGGCTTCGCCTATTTGCT
TGAAGATGTTCAAGAAGGCGAGAATAAAATGGTGGACGTGGAAGAAATCC
GGACGAAAGACGGCAACCTCATGATATCATGGAAACGCAAGTCATCCAGT
GCTTCGTCGAAATGTATCCTGGACGTTGTTGAACTTGGCGAAGGTAATGA
Gataaaaaatctagaaaatca
Run BLAST on NCBI

protein sequence of TCONS_00039059-protein

>TCONS_00039059-protein ID=TCONS_00039059-protein|Name=TCONS_00039059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MSSASATGNGNILITPPGKDFEHNSMQQQNWYFPSFHHPTRFPSPFTPTH
YNSHNFTNLFPPQTSNATATDHTEPTELTEPSEVSEPSTEQSTAQDPHTN
EAPSYAFLLNFYNQWKDTVPLCQCNRKSYVLQDYFDRRRPDYSAAHTLYL
NVAKKAIEKFQLTASKNKLQKMNAVYWMIRVLKHDNDATTYQTLNEKLSL
LLAGQKSQSKLKREAEEKGFKSVNEYKKKKPKRVKKTTAQPDQLEPEPEH
PSIEDIAESIISANYPPKIEKHSYVVVAWERQMGFAYLLEDVQEGENKMV
DVEEIRTKDGNLMISWKRKSSSASSKCILDVVELGEGNEIKNLEN
Run BLAST on NCBI

transcript from alignment at sc0002002:29334..33190+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039059 ID=TCONS_00039059|Name=TCONS_00039059|organism=Clytia hemisphaerica|type=transcript|length=3857bp|location=Sequence derived from alignment at sc0002002:29334..33190+ (Clytia hemisphaerica)
cTGGAATAGTAATTTCCAAAAATCTAAAACATCCATGATGATCACCCCTA
ATCTAAAATTAGACAAACCTGGTTGCTGAAGTACTTTAGAGATTGCAGGG
AAATCCAAAACGTATTGCAGGAGGCGTACTTTGATTCTCACGGGTGCTTC
CATATATCCCGGGTGGAAAGTTTGACAATCTGAAAGTACCATTAGTTCAT
CAACCAAAATTTCGAAATAGGGATCCACGTGGAAGGCTTCCTTTCTGCCG
TTGCCAGGGATAGTTCCAAAAAGCATAATGCCACCAACAGATTTTCGCAG
AGCGGGCGGAGAATTAAGGATCGATAACATCAGTGGCCACATCGAGTAGA
CGTGGTGCATCGTTTTGAACGGGTTGACACCATCACTGCAAAAATTTAAA
ACCACGCCGTCGTCATCACCTTTAAACTCTCCATCCTCGTCAAACCAATT
CTCCCATCTGCTGGTATCCCATATGTCACGCAAATATCCATCCTTCGGGC
GGGTAGTATGAGCCTGCAATATGCGCACCAAGTTTTCATTTTGATACAAA
CGGGCGATTCGCGGTCCGATAGGAAAGTATTTGAATGTTTTGGATTTGGT
TTTACTACTTCCACACTTCGGACACGTTTTAGCAGAAGAGAGTTCATTTC
TAAAAACCACGCAGTCCTTTTCACACGCCTTGAAAGTCTGGATCGGTATA
AGAAAGTCTTTGATCTTGGCTTTTGCCTCTTCATAAGATGAACAAGATTC
GTTGGGTTTGGGTAATTTAAAAAGTTTATCGTTGCGAAAGCTCTCAGAAA
CAGTTGCCTTAGCATAGCTAGGATGCGAAACAAATTTACGAAACTCCAAA
AAGATATGGTCTAAGACGGAGATATCAGCATCAAGGAAAAGAGGTGTCTT
AGCTGCTGGATGGGTTTCAAAAAGTCCAGGGTAATACGGACAGTCAATGT
TTTGAGTTTCAAGAGGTGCTGTGGTTTTTTGAATGGCATATGAAGCATCA
GTTTTTGCATGGCGATAAATTGTCTTTGATGAACGGATCGCTCCATTACA
CCGATAGCTAGTGCAGTTACACGGTCTACCTGAAATTGAAAAGAAGTAAA
TAATTTGTTTGCTTTGTTTGTAACAACCACAACCGGGGGTACTCTTGCCG
ACCGACAAGATTGCTTCGCTGCTGAAAATTGGACTGACATTTTAAATTTT
CAATTTTTACCAAAACAAAGGCGCATGGAGGTTAAAAATGATACACTCTG
AATGAACAGTACATGCCCCAGGGAGTGTCAATAAAAAGAATTACGAACGC
TGATTGGTTTTTTAATACTTATGACCAAATATGGTCAACGGATATTTTAC
AAAAGATCGTAAGCCCACATTCGATCAAAATTGCTTCAAGAACGACAGTT
ATTCAGTTGGTAAACAAAACACATTGTCGACAACACGATGCCACTTCATT
AAAGTTAAGTAAAATTTTCTTACCTCCTGCAAGTCTTGAATTCATTCTTT
CAAAGTGAAAATTATTTTTCTGAGTACAATAAATCTTATGATTTTCATTA
ACCAGTGAACCACCAATACGAATCTTTGGAGGGAAATGATTAATTTGCTT
TTTGTGAGTCCTTATAAAATGTTTTCACTTTAGAACAAAATCTTGGGGGG
AAATAATTTTTCGAACAAAATTATAGGATTTCAATATTTTTTCGAGCTAA
AGTATAGGCAGTCAATAATTTTTCGAGCAAAAATATAGGCAGTCAATAAT
CTTTCGAACGAAATTATAGTTAGTCAATATTTTTTCGAACGAAATTATAG
GTAGTCAATATTTTTTCGAACGAATATTGCCAGACAATATATTTTCGAAT
TTTTATCGTTCGATTCATCGAAAATATTCTTGAGATCTTATTCATTATTC
TTCATTTTTGTTCATACCGAGATTGGAAGCAGCCATGTCATCAGCCAGTG
CCACCGGGAATGGAAACATTTTGATAACACCTCCGGGCAAAGATTTCGAA
CATAATAGTATGCAACAGCAAAATTGGTATTTTCCATCCTTTCATCATCC
AACAAGATTTCCTTCGCCATTTACACCTACGCACTACAATTCACACAATT
TTACAAACTTATTCCCGCCGCAAACTTCAAACGCTACAGCTACAGACCAT
ACCGAACCAACCGAACTAACAGAACCATCCGAAGTATCCGAACCATCCAC
CGAACAATCTACCGCTCAAGACCCACACACCAATGAAGCACCATCATACG
CATTTCTTTTAAATTTTTATAACCAATGGAAGGACACAGTACCACTCTGC
CAATGCAACAGAAAATCTTACGTGCTTCAGGACTATTTCGACAGAAGAAG
GCCAGATTATTCTGCTGCCCATACACTTTATTTGGTATGTAATACTTCAG
ATCTTTAATAATTGAGTTGGTTGGTCTTTTCTGTTGAAATTTAATCTCAT
TTTAAACTTATATACCTTCCGCATACATGTACGGGGTTGGGGATGTTTCA
TTTTCGAAGAAAAGTCTTGGCATGTCATTTTTTTCCTCCATCTATATACA
GAAATCTTCTAATAAGTGAATAATTTTTTTCATTTGTCAGAATGTTGCCA
AGAAAGCGATTGAAAAATTCCAACTGACAGCTAGCAAGAACAAGCTTCAA
AAGATGAATGCAGTTTATTGGGTAATTCTTATTCATTTATTATTTTGGAG
GAGCATTTTATCCTTTGTAGGGAGAGTTACGTAAATAAATAGACATAGGT
CCACTTTTTCCCGGGTGTTCCCTTGTATTTCATATATTTATTTGTAAGCA
GCTGATTGGCTATTCGGTTATGACGTAATTCAGAAAGtccaattcgaatg
ttttgaaattttgcaaacaaAACGATTTTGTAAATGTAAAGCGTAAAAGT
GAATTTGGTTATGTTTTAAAATTAGTTCTTCTTCTTACATATATTTGTAC
ATGTTAATTCAGCTCAAGTTGTATactaaaaaaactaaaagtttGTTGAT
TTGATAACTGGTAATTCTGTTATGGTAATATTACTTAATTTGTACTAATT
TTGTCCTTATTTTGAATTCTTAGATGATCCGCGTACTAAAGCACGACAAC
GACGCCACCACGTACCAAACCCTCAACGAGAAGCTATCGTTATTATTGGC
TGGACAAAAAAGTCAATCTAAGCTAAAGTGAGTTACATATTCTGTCAAAA
CATTTTCACATTGTTAAAAAGTTGGAGGTctttaaaactttgaaagaaaa
tttaccCTCGTTGAACATTCTTTGTGTTATTCATACATGTTtacaacttt
gttttttttgttcgaGATAACCTTCAAAATTTGTAATTGATCTATCTTTT
TATACTAGGAGAGAAGCAGAGGAAAAAGGATTCAAATCGGTGAACNggtt
ttttttgtttgagataACCTTCAAAATTTGTAATTGATCTATCTTTTTAT
ACTAGGAGAGAAGCAGAGGAAAAAGGCTTCAAATCGGTGAACGAATACAA
AAAGAAGAAACCAAAGAGGGTAAAAAAGACCACTGCGCAACCAGATCAAC
TAGAACCAGAACCAGAACACCCAAGCATCGAAGACATCGCTGAATCGATC
ATATCGGCAAATTATCCTCCGAAAATTGAAAAGCATAGTTATGTTGTTGT
GGCATGGGAGAGGCAAATGGGCTTCGCCTATTTGCTTGAAGATGTTCAAG
AAGGCGAGAATAAAATGGTGGACGTGGAAGAAATCCGGACGAAAGACGGC
AACCTCATGATATCATGGAAACGCAAGTCATCCAGTGCTTCGTCGAAATG
TATCCTGGACGTTGTTGAACTTGGCGAAGGTAATGAGataaaaaatctag
aaaatca

Coding sequence (CDS) from alignment at sc0002002:29334..33190+

>TCONS_00039059 ID=TCONS_00039059|Name=TCONS_00039059|organism=Clytia hemisphaerica|type=CDS|length=4140bp|location=Sequence derived from alignment at sc0002002:29334..33190+ (Clytia hemisphaerica)
ATGTCATCAGCCAGTGCCACCGGGAATGGAAACATTTTGATAACACCTCC
GGGCAAAGATTTCGAACATAATAGTATGCAACAGCAAAATTGGTATTTTC
CATCCTTTCATCATCCAACAAGATTTCCTTCGCCATTTACACCTACGCAC
TACAATTCACACAATTTTACAAACTTATTCCCGCCGCAAACTTCAAACGC
TACAGCTACAGACCATACCGAACCAACCGAACTAACAGAACCATCCGAAG
TATCCGAACCATCCACCGAACAATCTACCGCTCAAGACCCACACACCAAT
GAAGCACCATCATACGCATTTCTTTTAAATTTTTATAACCAATGGAAGGA
CACAGTACCACTCTGCCAATGCAACAGAAAATCTTACGTGCTTCAGGACT
ATTTCGACAGAAGAAGGCCAGATTATTCTGCTGCCCATACACTTTATTTG
AATGTTGCCAAGAAAGCGATTGAAAAATTCCAACTGACAGCTAGCAAGAA
CAAGCTTCAAAAGATGAATGCAGTTTATTGGATGATCCGCGTACTAAAGC
ACGACAACGACGCCACCACGTACCAAACCCTCAACGAGAAGCTATCGTTA
TTATTGGCTGGACAAAAAAGTCAATCTAAGCTAAAGAGAGAAGCAGAGGA
AAAAGGCTTCAAATCGGTGAACGAATACAAAAAGAAGAAACCAAAGAGGG
TAAAAAAGACCACTGCGCAACCAGATCAACTAGAACCAGAACCAGAACAC
CCAAGCATCGAAGACATCGCTGAATCGATCATATCGGCAAATTATCCTCC
GAAAATTGAAAAGCATAGTTATGTTGTTGTGGCATGGGAGAGGCAAATGG
GCTTCGCCTATTTGCTTGAAGATGTTCAAGAAGGCGAGAATAAAATGGTG
GACGTGGAAGAAATCCGGACGAAAGACGGCAACCTCATGATATCATGGAA
ACGCAAGTCATCCAGTGCTTCGTCGAAATGTATCCTGGACGTTGTTGAAC
TTGGCGAAGGTAATGAGataaaaaatctagaaaatATGTCATCAGCCAGT
GCCACCGGGAATGGAAACATTTTGATAACACCTCCGGGCAAAGATTTCGA
ACATAATAGTATGCAACAGCAAAATTGGTATTTTCCATCCTTTCATCATC
CAACAAGATTTCCTTCGCCATTTACACCTACGCACTACAATTCACACAAT
TTTACAAACTTATTCCCGCCGCAAACTTCAAACGCTACAGCTACAGACCA
TACCGAACCAACCGAACTAACAGAACCATCCGAAGTATCCGAACCATCCA
CCGAACAATCTACCGCTCAAGACCCACACACCAATGAAGCACCATCATAC
GCATTTCTTTTAAATTTTTATAACCAATGGAAGGACACAGTACCACTCTG
CCAATGCAACAGAAAATCTTACGTGCTTCAGGACTATTTCGACAGAAGAA
GGCCAGATTATTCTGCTGCCCATACACTTTATTTGAATGTTGCCAAGAAA
GCGATTGAAAAATTCCAACTGACAGCTAGCAAGAACAAGCTTCAAAAGAT
GAATGCAGTTTATTGGATGATCCGCGTACTAAAGCACGACAACGACGCCA
CCACGTACCAAACCCTCAACGAGAAGCTATCGTTATTATTGGCTGGACAA
AAAAGTCAATCTAAGCTAAAGAGAGAAGCAGAGGAAAAAGGCTTCAAATC
GGTGAACGAATACAAAAAGAAGAAACCAAAGAGGGTAAAAAAGACCACTG
CGCAACCAGATCAACTAGAACCAGAACCAGAACACCCAAGCATCGAAGAC
ATCGCTGAATCGATCATATCGGCAAATTATCCTCCGAAAATTGAAAAGCA
TAGTTATGTTGTTGTGGCATGGGAGAGGCAAATGGGCTTCGCCTATTTGC
TTGAAGATGTTCAAGAAGGCGAGAATAAAATGGTGGACGTGGAAGAAATC
CGGACGAAAGACGGCAACCTCATGATATCATGGAAACGCAAGTCATCCAG
TGCTTCGTCGAAATGTATCCTGGACGTTGTTGAACTTGGCGAAGGTAATG
AGataaaaaatctagaaaatATGTCATCAGCCAGTGCCACCGGGAATGGA
AACATTTTGATAACACCTCCGGGCAAAGATTTCGAACATAATAGTATGCA
ACAGCAAAATTGGTATTTTCCATCCTTTCATCATCCAACAAGATTTCCTT
CGCCATTTACACCTACGCACTACAATTCACACAATTTTACAAACTTATTC
CCGCCGCAAACTTCAAACGCTACAGCTACAGACCATACCGAACCAACCGA
ACTAACAGAACCATCCGAAGTATCCGAACCATCCACCGAACAATCTACCG
CTCAAGACCCACACACCAATGAAGCACCATCATACGCATTTCTTTTAAAT
TTTTATAACCAATGGAAGGACACAGTACCACTCTGCCAATGCAACAGAAA
ATCTTACGTGCTTCAGGACTATTTCGACAGAAGAAGGCCAGATTATTCTG
CTGCCCATACACTTTATTTGAATGTTGCCAAGAAAGCGATTGAAAAATTC
CAACTGACAGCTAGCAAGAACAAGCTTCAAAAGATGAATGCAGTTTATTG
GATGATCCGCGTACTAAAGCACGACAACGACGCCACCACGTACCAAACCC
TCAACGAGAAGCTATCGTTATTATTGGCTGGACAAAAAAGTCAATCTAAG
CTAAAGAGAGAAGCAGAGGAAAAAGGCTTCAAATCGGTGAACGAATACAA
AAAGAAGAAACCAAAGAGGGTAAAAAAGACCACTGCGCAACCAGATCAAC
TAGAACCAGAACCAGAACACCCAAGCATCGAAGACATCGCTGAATCGATC
ATATCGGCAAATTATCCTCCGAAAATTGAAAAGCATAGTTATGTTGTTGT
GGCATGGGAGAGGCAAATGGGCTTCGCCTATTTGCTTGAAGATGTTCAAG
AAGGCGAGAATAAAATGGTGGACGTGGAAGAAATCCGGACGAAAGACGGC
AACCTCATGATATCATGGAAACGCAAGTCATCCAGTGCTTCGTCGAAATG
TATCCTGGACGTTGTTGAACTTGGCGAAGGTAATGAGataaaaaatctag
aaaatATGTCATCAGCCAGTGCCACCGGGAATGGAAACATTTTGATAACA
CCTCCGGGCAAAGATTTCGAACATAATAGTATGCAACAGCAAAATTGGTA
TTTTCCATCCTTTCATCATCCAACAAGATTTCCTTCGCCATTTACACCTA
CGCACTACAATTCACACAATTTTACAAACTTATTCCCGCCGCAAACTTCA
AACGCTACAGCTACAGACCATACCGAACCAACCGAACTAACAGAACCATC
CGAAGTATCCGAACCATCCACCGAACAATCTACCGCTCAAGACCCACACA
CCAATGAAGCACCATCATACGCATTTCTTTTAAATTTTTATAACCAATGG
AAGGACACAGTACCACTCTGCCAATGCAACAGAAAATCTTACGTGCTTCA
GGACTATTTCGACAGAAGAAGGCCAGATTATTCTGCTGCCCATACACTTT
ATTTGAATGTTGCCAAGAAAGCGATTGAAAAATTCCAACTGACAGCTAGC
AAGAACAAGCTTCAAAAGATGAATGCAGTTTATTGGATGATCCGCGTACT
AAAGCACGACAACGACGCCACCACGTACCAAACCCTCAACGAGAAGCTAT
CGTTATTATTGGCTGGACAAAAAAGTCAATCTAAGCTAAAGAGAGAAGCA
GAGGAAAAAGGCTTCAAATCGGTGAACGAATACAAAAAGAAGAAACCAAA
GAGGGTAAAAAAGACCACTGCGCAACCAGATCAACTAGAACCAGAACCAG
AACACCCAAGCATCGAAGACATCGCTGAATCGATCATATCGGCAAATTAT
CCTCCGAAAATTGAAAAGCATAGTTATGTTGTTGTGGCATGGGAGAGGCA
AATGGGCTTCGCCTATTTGCTTGAAGATGTTCAAGAAGGCGAGAATAAAA
TGGTGGACGTGGAAGAAATCCGGACGAAAGACGGCAACCTCATGATATCA
TGGAAACGCAAGTCATCCAGTGCTTCGTCGAAATGTATCCTGGACGTTGT
TGAACTTGGCGAAGGTAATGAGataaaaaatctagaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023508XLOC_023508Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039059-exon-sc0002002-1491911889:29334..31717TCONS_00039059-exon-sc0002002-1491911889:29334..31717Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1510915933:29334..31717TCONS_00039059-exon-sc0002002-1510915933:29334..31717Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1575043694:29334..31717TCONS_00039059-exon-sc0002002-1575043694:29334..31717Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1491911889:31924..32004TCONS_00039059-exon-sc0002002-1491911889:31924..32004Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1510915933:31924..32004TCONS_00039059-exon-sc0002002-1510915933:31924..32004Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1575043694:31924..32004TCONS_00039059-exon-sc0002002-1575043694:31924..32004Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1491911889:32407..32510TCONS_00039059-exon-sc0002002-1491911889:32407..32510Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1510915933:32407..32510TCONS_00039059-exon-sc0002002-1510915933:32407..32510Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1575043694:32407..32510TCONS_00039059-exon-sc0002002-1575043694:32407..32510Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1491911889:32789..33190TCONS_00039059-exon-sc0002002-1491911889:32789..33190Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1510915933:32789..33190TCONS_00039059-exon-sc0002002-1510915933:32789..33190Clytia hemisphaericaexon
TCONS_00039059-exon-sc0002002-1575043694:32789..33190TCONS_00039059-exon-sc0002002-1575043694:32789..33190Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039059-proteinTCONS_00039059-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002002supercontigsc0002002:29334..33190 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.118636	0.0581748	0.0142287	0.190543	0.185236	0.415692	0.358817	0.183069	0.0768515	0.248929	0.10696	0.139766	0.319383	0.533143	0.917737	0.954817	1.25942	0.542089	0.681469	0.885761	0.936797	0.13255	0.289915	0.372358	0.463364	0.983703	0.168487	2.86196	2.00949
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039059 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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