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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039053 ID=TCONS_00039053|Name=TCONS_00039053|organism=Clytia hemisphaerica|type=transcript|length=781bp
CTCGCGAAAATCAATACAAAATTGGTGAAAacttatattcaattttctcc
atATCCGAGCCTGGAATATGCTtagtgttatgcttataaaagcaTAAAGA
GAGTCTGGTCCACCCAACCACCCTTTCGCATTGTGTTAAATTTCAAATGT
ATAGCAAGAACATGTGAAAAATCAAGGCGTAAAAGtagtttatatttaaa
aaaattttccgagaaaagcAAACGATCGATTGACGAATTACACgttacaa
aaaatttatttatttaagatCAAACATAAAGTCTCCTTTTTGTGTGATTT
TGGAGCACATTCACAAAGCTTAAAGATTAGACAATTAATAGTAAGTAACG
TTTATTACGTTTCGAAATATTTAACACAATTTGACAACCAGACTGACGCC
AATCCCAAAAATGCACGAGCGACAAGCTCAAAATGCATCATAAAATCATG
CAATGCACGAGCGACAAGCTCAAAATGCATATATAAATCATGCAATGCAC
GAGCGACAAGCTCAAAATGCATATATAAGTCATGCAATGCACGAGCGACA
AGCTCAAACAAAATGCATCATAAAGTCATGCAGTGCACGAGCGACAAGCT
CAAAGTGCATATATAAATCATGCAGTGCACGAGCGAAAAGCTCAAGCGTA
CGAGCATCAAGCTCAAGTACACGAGCAACAACCTCAAGTGCAGGTATCAA
GTTATGTTAAATTAAGTTAAGCCGTTGCTGTGGAACCAAATGCTGAGTAA
AGTTTTGTCTTATAAGGATGTTAAAAGCGAA Run BLAST on NCBI transcript from alignment at sc0002001:29580..30570+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039053 ID=TCONS_00039053|Name=TCONS_00039053|organism=Clytia hemisphaerica|type=transcript|length=991bp|location=Sequence derived from alignment at sc0002001:29580..30570+ (Clytia hemisphaerica)
CTCGCGAAAATCAATACAAAATTGGTGAAAacttatattcaattttctcc
atATCCGAGCCTGGAATATGCTtagtgttatgcttataaaagcaTAAAGA
GAGTCTGGTCCACCCAACCACCCTTTCGCATTGTGTTAAATTTCAAATGT
ATAGCAAGAACATGTGAAAAATCAAGGCGTAAAAGtagtttatatttaaa
aaaattttccgagaaaagcAAACGATCGATTGACGAATTACACgttacaa
aaaatttatttatttaagatCAAACATAAAGTCTCCTTTTTGTGTGATTT
TGGAGCACATTCACAAAGCTTAAAGATTAGACAATTAATAGTAAGTAACG
TTTATTACGTTTCGAAATATTTAACACAATTTGACAACCAGACTGACGCC
AATCCCAAAAATGCACGAGCGACAAGCTCAAAATGCATCATAAAATCATG
CAATGCACGAGCGACAAGCTCAAAGTGCATATATAAATCATGCAATGCAC
GAGCGACAAGCTCAAAGTGCATATATAAATCATGCAATGCACGAGCGACA
AGCTCAAAGTGCATATATAAATCATACAATGCACGAACGACAAGCTCAAA
GTGCATATATAAATCATGCAACGCACGAGCGACAAGCTCAAAATGCATAT
ATAAATCATGCAATGCACGAGAGACAAGCTCAAGATGCATATATAAATCA
TGCAATGCACGAGCGACAAGCTCAAAATGCATATATAAGTCATGCAATGC
ACGAGCGACAAGCTCAAACAAAATGCATCATAAAGTCATGCAGTGCACGA
GCGACAAGCTCAAAGTGCATATATAAATCATGCAGTGCACGAGCGAAAAG
CTCAAGCGTACGAGCATCAAGCTCAAGTACACGAGCAACAACCTCAAGTG
CAGGTATCAAGTTATGTTAAATTAAGTTAAGCCGTTGCTGTGGAACCAAA
TGCTGAGTAAAGTTTTGTCTTATAAGGATGTTAAAAGCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039053-exon-sc0002001-1491911889:29580..30053 | TCONS_00039053-exon-sc0002001-1491911889:29580..30053 | Clytia hemisphaerica | exon |
| TCONS_00039053-exon-sc0002001-1510915933:29580..30053 | TCONS_00039053-exon-sc0002001-1510915933:29580..30053 | Clytia hemisphaerica | exon |
| TCONS_00039053-exon-sc0002001-1575043694:29580..30053 | TCONS_00039053-exon-sc0002001-1575043694:29580..30053 | Clytia hemisphaerica | exon |
| TCONS_00039053-exon-sc0002001-1491911889:30264..30570 | TCONS_00039053-exon-sc0002001-1491911889:30264..30570 | Clytia hemisphaerica | exon |
| TCONS_00039053-exon-sc0002001-1510915933:30264..30570 | TCONS_00039053-exon-sc0002001-1510915933:30264..30570 | Clytia hemisphaerica | exon |
| TCONS_00039053-exon-sc0002001-1575043694:30264..30570 | TCONS_00039053-exon-sc0002001-1575043694:30264..30570 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002001 | supercontig | sc0002001:29580..30570 + |
Blast
The following BLAST results are available for this feature:
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