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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039052 ID=TCONS_00039052|Name=TCONS_00039052|organism=Clytia hemisphaerica|type=transcript|length=1181bp
CACAACaacctgaaataaaaaaaaaccaaGAAGGAAAAAGGCACACAGAA
CCCAACAGCGTTACACTTGAGGCTGCGAAAGTGCTGGAAACATAGAACAG
ACCCCCCCTGCTTAAAATTTGCTTCCATTTGCTGTTCTGGttgtacctta
agtggattaatttgcGTGAAGATTAGAGTTTTcctcaaaattcgcgaaat
ataatcctcgcgaaaaaCTAATCATAACTTTTGTCGAAACCCttaggaaa
gaaaataaaagagaTTAGTTCAAAAAGGGGCCGATTCGCGAAATGTTATC
CTCGCGTAAATATTTTCTCTGCTCGTGAAAACAAGTCCTTATTTATGAAA
GAAATTGGCTCGCGAAAATCAATACAAAATTGGTGAAAacttatattcaa
ttttctccatATCCGAGCCTGGAATATGCTtagtgttatgcttataaaag
caTAAAGAGAGTCTGGTCCACCCAACCACCCTTTCGCATTGTGTTAAATT
TCAAATGTATAGCAAGAACATGTGAAAAATCAAGGCGTAAAAGtagttta
tatttaaaaaaattttccgagaaaagcAAACGATCGATTGACGAATTACA
CgttacaaaaaatttatttatttaagatCAAACATAAAGTCTCCTTTTTG
TGTGATTTTGGAGCACATTCACAAAGCTTAAAGATTAGACAATTAATAGT
AAGTAACGTTTATTACGTTTCGAAATATTTAACACAATTTGACAACCAGA
CTGACGCCAATCCCAAAAATGCACGAGCGACAAGCTCAAAATGCATCATA
AAATCATGCAATGCACGAGCGACAAGCTCAAAGTGCATATATAAATCATG
CAATGCACGAGCGACAAGCTCAAAATGCATATATAAATCATGCAATGCAC
GAGCGACAAGCTCAAAATGCATATATAAGTCATGCAATGCACGAGCGACA
AGCTCAAACAAAATGCATCATAAAGTCATGCAGTGCACGAGCGACAAGCT
CAAAGTGCATATATAAATCATGCAGTGCACGAGCGAAAAGCTCAAGCGTA
CGAGCATCAAGCTCAAGTACACGAGCAACAACCTCAAGTGCAGGTATCAA
GTTATGTTAAATTAAGTTAAGCCGTTGCTGTGGAACCAAATGCTGAGTAA
AGTTTTGTCTTATAAGGATGTTAAAAGCGAA Run BLAST on NCBI transcript from alignment at sc0002001:29222..30570+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039052 ID=TCONS_00039052|Name=TCONS_00039052|organism=Clytia hemisphaerica|type=transcript|length=1349bp|location=Sequence derived from alignment at sc0002001:29222..30570+ (Clytia hemisphaerica)
CACAACaacctgaaataaaaaaaaaccaaGAAGGAAAAAGGCACACAGAA
CCCAACAGCGTTACACTTGAGGCTGCGAAAGTGCTGGAAACATAGAACAG
ACCCCCCCTGCTTAAAATTTGCTTCCATTTGCTGTTCTGGttgtacctta
agtggattaatttgcGTGAAGATTAGAGTTTTcctcaaaattcgcgaaat
ataatcctcgcgaaaaaCTAATCATAACTTTTGTCGAAACCCttaggaaa
gaaaataaaagagaTTAGTTCAAAAAGGGGCCGATTCGCGAAATGTTATC
CTCGCGTAAATATTTTCTCTGCTCGTGAAAACAAGTCCTTATTTATGAAA
GAAATTGGCTCGCGAAAATCAATACAAAATTGGTGAAAacttatattcaa
ttttctccatATCCGAGCCTGGAATATGCTtagtgttatgcttataaaag
caTAAAGAGAGTCTGGTCCACCCAACCACCCTTTCGCATTGTGTTAAATT
TCAAATGTATAGCAAGAACATGTGAAAAATCAAGGCGTAAAAGtagttta
tatttaaaaaaattttccgagaaaagcAAACGATCGATTGACGAATTACA
CgttacaaaaaatttatttatttaagatCAAACATAAAGTCTCCTTTTTG
TGTGATTTTGGAGCACATTCACAAAGCTTAAAGATTAGACAATTAATAGT
AAGTAACGTTTATTACGTTTCGAAATATTTAACACAATTTGACAACCAGA
CTGACGCCAATCCCAAAAATGCACGAGCGACAAGCTCAAAATGCATCATA
AAATCATGCAATGCACGAGCGACAAGCTCAAAGTGCATATATAAATCATG
CAATGCACGAGCGACAAGCTCAAAGTGCATATATAAATCATGCAATGCAC
GAGCGACAAGCTCAAAGTGCATATATAAATCATACAATGCACGAACGACA
AGCTCAAAGTGCATATATAAATCATGCAACGCACGAGCGACAAGCTCAAA
ATGCATATATAAATCATGCAATGCACGAGAGACAAGCTCAAGATGCATAT
ATAAATCATGCAATGCACGAGCGACAAGCTCAAAATGCATATATAAGTCA
TGCAATGCACGAGCGACAAGCTCAAACAAAATGCATCATAAAGTCATGCA
GTGCACGAGCGACAAGCTCAAAGTGCATATATAAATCATGCAGTGCACGA
GCGAAAAGCTCAAGCGTACGAGCATCAAGCTCAAGTACACGAGCAACAAC
CTCAAGTGCAGGTATCAAGTTATGTTAAATTAAGTTAAGCCGTTGCTGTG
GAACCAAATGCTGAGTAAAGTTTTGTCTTATAAGGATGTTAAAAGCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039052-exon-sc0002001-1491911889:29222..30095 | TCONS_00039052-exon-sc0002001-1491911889:29222..30095 | Clytia hemisphaerica | exon |
| TCONS_00039052-exon-sc0002001-1510915933:29222..30095 | TCONS_00039052-exon-sc0002001-1510915933:29222..30095 | Clytia hemisphaerica | exon |
| TCONS_00039052-exon-sc0002001-1575043694:29222..30095 | TCONS_00039052-exon-sc0002001-1575043694:29222..30095 | Clytia hemisphaerica | exon |
| TCONS_00039052-exon-sc0002001-1491911889:30264..30570 | TCONS_00039052-exon-sc0002001-1491911889:30264..30570 | Clytia hemisphaerica | exon |
| TCONS_00039052-exon-sc0002001-1510915933:30264..30570 | TCONS_00039052-exon-sc0002001-1510915933:30264..30570 | Clytia hemisphaerica | exon |
| TCONS_00039052-exon-sc0002001-1575043694:30264..30570 | TCONS_00039052-exon-sc0002001-1575043694:30264..30570 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002001 | supercontig | sc0002001:29222..30570 + |
Blast
The following BLAST results are available for this feature:
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