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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039048 ID=TCONS_00039048|Name=TCONS_00039048|organism=Clytia hemisphaerica|type=transcript|length=506bp
CAAGAAGCTTTAGTTTCATGTTGCAATTTGTCAGTCTTGCTGTGATATCA
GGTTTTTATGCAAGAAATGTAGTGATCCAGAAATTAAAAAAGAGAAGCAA
AAATCATGGGTCCGTTCAAACCCGTTAGGGTAAAAGACCAAAAATGTTTG
GTGGTGATGCCATCTGGTGATGACATTGAGATTGGTGTCACTAATGTTAT
GAAAGGCAGTGGTCTTTTAGATCTTGTCTgcaaaaaagttggtatcattG
AAAAAGAGTATTTTGGCTTCAAGTATGTAcatcacaaagataaaaaggtA
AATTAGAAAATACTTTTCTCCATTTACTTTTATCATATATATCATGATAC
CTCATTTGTTGTGTACTTTTAATACACAGAGGGAGGGTTTATTTGAAGCT
GGTGACCAAAATTTCTCTCTAAAGCCTCAAAGCGTAattattaagcagat
attcgactTTTTCACGTTGAATATAATGGTTTATCGTTCACCAATTAGCA
GGAAAG Run BLAST on NCBI transcript from alignment at sc0002000:13846..14746- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039048 ID=TCONS_00039048|Name=TCONS_00039048|organism=Clytia hemisphaerica|type=transcript|length=901bp|location=Sequence derived from alignment at sc0002000:13846..14746- (Clytia hemisphaerica)
CAAGAAGCTTTAGTTTCATGTTGCAATTTGTCAGTCTTGCTGTGATATCA
GGTGATATATTTGAAATACGAATTGAAATGTCTATGTTAAAAGAAATCTT
ATCTAGAAACAACTATATCTCATTTATGCCTGATTAGGTTATTCTTAGAG
CTACTGCTATTGATGCTAAGTCTCTTTGCTTTTTCATAATTTTGTCTTGA
TTGTACCTTACATTTCTTACCATTAGGTTTTTATGCAAGAAATGTAGTGA
TCCAGAAATTAAAAAAGAGAAGCAAAAATCATGGGTCCGTTCAAACCCGT
TAGGGTAAAAGACCAAAAATGTTTGGTGGTGATGCCATCTGGTGATGACA
TTGAGATTGGTGTCACTGTAAGTTTTCTTTCCGTTTATTTCAATTTTTGA
CGTTTTTGAGCAATCTCAGCAAAAAGCTTTTATTTTCATTTCAGTATAGC
TTTTGTTTTTGTGCACCAATTTGATAAATGAGCCAACAATATTCAAGTTT
ACCTTTTCCCTTTCAATGAAATAATAATGGTTGTTTATTTCTGACACTCC
CCTTAGATTTTCTAAACTCACCTCTCTGTCTGTTTAGAATGTTATGAAAG
GCAGTGGTCTTTTAGATCTTGTCTGCAAAAAAGTTGGTATCATTGAAAAA
GAGTATTTTGGCTTCAAGTATGTACATCACAAAGATAAAAAGGTAAATTA
GAAAATACTTTTCTCCATTTACTTTTATCATATATATCATGATACCTCAT
TTGTTGTGTACTTTTAATACACAGAGGGAGGGTTTATTTGAAGCTGGTGA
CCAAAATTTCTCTCTAAAGCCTCAAAGCGTAATTATTAAGCAGATATTCG
ACTTTTTCACGTTGAATATAATGGTTTATCGTTCACCAATTAGCAGGAAA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039048-exon-sc0002000-1575043694:14696..14746 | TCONS_00039048-exon-sc0002000-1575043694:14696..14746 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1575043694:14380..14520 | TCONS_00039048-exon-sc0002000-1575043694:14380..14520 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1575043694:13846..14159 | TCONS_00039048-exon-sc0002000-1575043694:13846..14159 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1510915933:14696..14746 | TCONS_00039048-exon-sc0002000-1510915933:14696..14746 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1510915933:14380..14520 | TCONS_00039048-exon-sc0002000-1510915933:14380..14520 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1510915933:13846..14159 | TCONS_00039048-exon-sc0002000-1510915933:13846..14159 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1491911889:14696..14746 | TCONS_00039048-exon-sc0002000-1491911889:14696..14746 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1491911889:14380..14520 | TCONS_00039048-exon-sc0002000-1491911889:14380..14520 | Clytia hemisphaerica | exon |
| TCONS_00039048-exon-sc0002000-1491911889:13846..14159 | TCONS_00039048-exon-sc0002000-1491911889:13846..14159 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002000 | supercontig | sc0002000:13846..14746 - |
Blast
The following BLAST results are available for this feature:
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