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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039032 ID=TCONS_00039032|Name=TCONS_00039032|organism=Clytia hemisphaerica|type=transcript|length=893bp
TTTAAACACAAACAGTCCTCCCGAGGGGAACCAAAGGGGTTGAACAGAGA
CATGGCATATCAGTGATCATATCAGTTCTTCGAAAAAATAGTGCACACGT
AAAATAGGAATAGACTacgaaaataaaaggaaaacacTGTGACAAGACTA
ATCATAAATGACAATAAAAAACACAAACATATAACAATGAATATACctaa
tcaaataaatttcatgaCAATGAACGTATAAAAGCAAAACATATGTAATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCATAAAT
GACAATAAAAAACACAAACATATAACAATGAATATACctaatcaaataaa
tttcatgaCAATGAACGTATAAAAGCAAAACATATGTAATAAACAAATAC
AGGAAGTAGCATAAAGCCAAACTAGAATATAATATGCCTAATATGAATAT
TGGATAAATATGTGTTATAAGTAAATCGTATAAAGCTTTCCCCCTGTAGT
TGAAGGGGAGGGCTGGTGGAGCAAATTATAAAAACAGCAGTACAGcaaaa
tgaagaactgaaaaggACTGGCCAGGTACCCTGTTCTGCTATATGNtgcg
aacaataacgagagattgaccgggagccatcgagcctaggctagcgagtg
actgttcacaaaaacaaaaaccttgtttaagatccctaagatctcttttc
cacatctctgcgttcactttttggattttggcttttttcaacctgaattt
taaaaaattccaaccttgttaaatttggattttggcttttttcaacctgg
atttacgaaaattccaaccttgttaaatttggattttggcttttttcaac
ctggatttacgaaaattccaaccttgttaaatttggattttgg Run BLAST on NCBI transcript from alignment at sc0001996:40743..41635 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039032 ID=TCONS_00039032|Name=TCONS_00039032|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at sc0001996:40743..41635 (Clytia hemisphaerica)
ccaaaatccaaatttaacaaggttggaattttcgtaaatccaggttgaaa
aaagccaaaatccaaatttaacaaggttggaattttcgtaaatccaggtt
gaaaaaagccaaaatccaaatttaacaaggttggaattttttaaaattca
ggttgaaaaaagccaaaatccaaaaagtgaacgcagagatgtggaaaaga
gatcttagggatcttaaacaaggtttttgtttttgtgaacagtcactcgc
tagcctaggctcgatggctcccggtcaatctctcgttattgttcgcaNCA
TATAGCAGAACAGGGTACCTGGCCAGTccttttcagttcttcattttgCT
GTACTGCTGTTTTTATAATTTGCTCCACCAGCCCTCCCCTTCAACTACAG
GGGGAAAGCTTTATACGATTTACTTATAACACATATTTATCCAATATTCA
TATTAGGCATATTATATTCTAGTTTGGCTTTATGCTACTTCCTGTATTTG
TTTATTACATATGTTTTGCTTTTATACGTTCATTGtcatgaaatttattt
gattagGTATATTCATTGTTATATGTTTGTGTTTTTTATTGTCATTTATG
GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTACA
TATGTTTTGCTTTTATACGTTCATTGtcatgaaatttatttgattagGTA
TATTCATTGTTATATGTTTGTGTTTTTTATTGTCATTTATGATTAGTCTT
GTCACAgtgttttccttttattttcgtAGTCTATTCCTATTTTACGTGTG
CACTATTTTTTCGAAGAACTGATATGATCACTGATATGCCATGTCTCTGT
TCAACCCCTTTGGTTCCCCTCGGGAGGACTGTTTGTGTTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039032-exon-sc0001996-1491911889:40743..41635 | TCONS_00039032-exon-sc0001996-1491911889:40743..41635 | Clytia hemisphaerica | exon |
| TCONS_00039032-exon-sc0001996-1510915933:40743..41635 | TCONS_00039032-exon-sc0001996-1510915933:40743..41635 | Clytia hemisphaerica | exon |
| TCONS_00039032-exon-sc0001996-1575043694:40743..41635 | TCONS_00039032-exon-sc0001996-1575043694:40743..41635 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001996 | supercontig | sc0001996:40743..41635 . |
Blast
The following BLAST results are available for this feature:
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