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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039019 ID=TCONS_00039019|Name=TCONS_00039019|organism=Clytia hemisphaerica|type=transcript|length=553bp
CGCTGTTCCAACCGGAGTGAAATTCCATACGGAGTTGAACTCCGAATAGC
CCCGTGGAACCGGAGTAAGACATCGTATAGTCTTTTGTTCAACTCCGGTT
AGTAATAGTGACTCCATCGCAGATGGTaataagaaaacgaaagtaacaaA
AATGGTGCATTTTATAGATAAAGTCCACGAAGATATATTGCAGCAAGGAT
ATCCAACAACTCCTGATCGTctgagaatgataaaaaatggaaTTAGCTGT
CCCTTTTACGCGAATGAAAAAGCCTATGGTTGTACGTCTGATTGAGGAGA
ATTGAATGATATTGGACAAACCCCTGACAAACCTCTGGATACAAACTATG
AAGAGTATAAAAGAGACTTGGGTGGAAAACAGTTGTTAAGATAAGGAAAG
TTGTTCCTGGCGGGAGTCTTGGTTTCATGTTCgtctgaaaaatgcacaaa
gatggcggaaagaattcaagaaaataatcaaaaatcaccatcaataaacg
acttttgcagcccgtcaaagtgcatcataaatgaagaaaacgcaCTAAAA
GAT Run BLAST on NCBI transcript from alignment at sc0001994:31594..32710- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039019 ID=TCONS_00039019|Name=TCONS_00039019|organism=Clytia hemisphaerica|type=transcript|length=1117bp|location=Sequence derived from alignment at sc0001994:31594..32710- (Clytia hemisphaerica)
CGCTGTTCCAACCGGAGTGAAATTCCATACGGAGTTGAACTCCGAATAGC
CCCGTGGAACCGGAGTAAGACATCGTATAGTCTTTTGTTCAACTCCGGTT
AGTAATAGTGACTCCATCGCAGATGGTAATAAGAAAACGAAAGTAACAAA
AATGGTGCATTTTATAGATAAAGTCCACGAAGATATATTGCAGCAAGGAT
ATCCAACAACTCCTGATCGTCTGAGAATGATAAAAAATGGAATTAGCTGT
CCCTTTTACGCGAATGAAAAAGGTATAGTATTGATTTAATTAAGGGATAA
ATTTCTCATCTTTTGCTTCATTTCATTTGGTGCCACTTGGCTATATAATA
ATTCCATTTTAAAAGGTAGGTCAAGTGTGACTGATAGGAAGATATTTCTG
GAGATGTCAAGAGGTTTTCAAGGAGCGTAATGCTTTTTGTAATACCTGCT
GACGCACTTTGTAATAGCAATTGACTCTTTTGTTATAGTAGTTAAGAAGT
CTCTGCTTTGAATTGCTTTATNGACTTGTGCATACTTCGGTTATTTTCTT
AAGGGTGCTGACGCACTTTGTAATAGAAATTGACTCTTTTGTTATAGTAG
TTAAGAAGTCTCTGCATTGAATTGCTTTACATGGGCGTGGAAGGGAGAGA
AAGGAATAATAAAGAGGGGAAAATTGTCCCCTCCCTGCCCACTAACTGCA
ATTAACGATTAATTGCACTCCTCTCGCTTAATAAACTGACGATTATCAGA
ACCAAGCGATATCCAATTCATTTACACAATGCCAGGGGAGCCCATAATTT
GATATAATCAATTATTACAAACGATCTTTTTTCCAGCCTATGGTTGTACG
TCTGATTGAGGAGAATTGAATGATATTGGACAAACCCCTGACAAACCTCT
GGATACAAACTATGAAGAGTATAAAAGAGACTTGGGTGGAAAACAGTTGT
TAAGATAAGGAAAGTTGTTCCTGGCGGGAGTCTTGGTTTCATGTTCGTCT
GAAAAATGCACAAAGATGGCGGAAAGAATTCAAGAAAATAATCAAAAATC
ACCATCAATAAACGACTTTTGCAGCCCGTCAAAGTGCATCATAAATGAAG
AAAACGCACTAAAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039019-exon-sc0001994-1575043694:32439..32710 | TCONS_00039019-exon-sc0001994-1575043694:32439..32710 | Clytia hemisphaerica | exon |
| TCONS_00039019-exon-sc0001994-1575043694:31594..31874 | TCONS_00039019-exon-sc0001994-1575043694:31594..31874 | Clytia hemisphaerica | exon |
| TCONS_00039019-exon-sc0001994-1510915933:32439..32710 | TCONS_00039019-exon-sc0001994-1510915933:32439..32710 | Clytia hemisphaerica | exon |
| TCONS_00039019-exon-sc0001994-1510915933:31594..31874 | TCONS_00039019-exon-sc0001994-1510915933:31594..31874 | Clytia hemisphaerica | exon |
| TCONS_00039019-exon-sc0001994-1491911889:32439..32710 | TCONS_00039019-exon-sc0001994-1491911889:32439..32710 | Clytia hemisphaerica | exon |
| TCONS_00039019-exon-sc0001994-1491911889:31594..31874 | TCONS_00039019-exon-sc0001994-1491911889:31594..31874 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001994 | supercontig | sc0001994:31594..32710 - |
Blast
The following BLAST results are available for this feature:
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