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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039017 ID=TCONS_00039017|Name=TCONS_00039017|organism=Clytia hemisphaerica|type=transcript|length=1279bp
GTttggaagtagagttttaactctgagttttcaCATTAGATTtaagactc
aggaccttaggatttcaGGATctgaaagctcaaaaatgttccaataaggc
tgagaatatacccctaccaaatcgaaaaatcaaatGAAGCAAAGTGAgag
tactgaaactgcaattctcagccgacctttaaattctgaaaaaggtTAAA
ATGCCCGAAatattgccaatatatttcggcactgattgtagaaaaGCATT
ATCTAACCTTGTAAAAGGAGAATTTTTAGTTGCATTTTTcgggattttga
tctttttataaatattgattgaaattctttatgactataagaaagaaagt
aaagggtatctaatgaacttttttgtgtacaatatccTTTgtatgaatgt
ttttatattcatAGGTGGGGaccgtacggtatttcggagaTATGGAAATC
AACCTTTTTTTTCGGAATTTcagaaatcgggcaaaattccttcgggattt
cgaaattctgaaattgtttctgtatcggaaatccaggaatttttgcttcg
aaatttcggtattataaagtttttatccctcGTTTTCGGAATTcgtacat
gaaaaatcaaatttgttgaaaaactagtgaaaacgaggaaaaaaaaaatc
ggtatcggaattgcatgcatttttttacggaatttcggaaattttggcaa
aattattcgttATTACTTAATTATTAATTATTACACCCCCCACTACATAC
ACCAAGctgaaatattttcaagttgTCGAATTTTTCAGCATTCAACGAGC
CATTTTTACGAAATATCTGCTGTTCTTTGCTAGGAGacggttttttatga
aaaagtgaACAGCAGGTCTCCTTTTCTAGGAGGGTCAATTTGCTTCAAAA
CATCTGTTGTTCTATTACAGGAGATAACGTCATCAGTGACCAGCAGATAG
CATTTTCTAGGTAATGACGTCATCGCTGAACAGCAGATAGATTTTTCTAG
GCAATAACTTTATAATGAACATTTTATCCATCTGCTGTTTCgttttgtta
ttttcatgagACAGGGTACAAACTGGCAGGATATTTTTGAAGAACGGCAG
ATAATATTTTCTAAACATTGAGACATGGGTACAAACCCATGAACAGCAGA
TCAATTTTTTAAGACAGTGAGACGGGTATAAACCCAAGAACAGCAGATTT
TTGAGACAGTGAGACAGGGTACAAACCCAAGAACAGCAGGTCAAATGTTC
TATGGGACAGGGTACAAAACTAGGGTCTC Run BLAST on NCBI transcript from alignment at sc0001993:27049..28327 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039017 ID=TCONS_00039017|Name=TCONS_00039017|organism=Clytia hemisphaerica|type=transcript|length=1279bp|location=Sequence derived from alignment at sc0001993:27049..28327 (Clytia hemisphaerica)
GAGACCCTAGTTTTGTACCCTGTCCCATAGAACATTTGACCTGCTGTTCT
TGGGTTTGTACCCTGTCTCACTGTCTCAAAAATCTGCTGTTCTTGGGTTT
ATACCCGTCTCACTGTCTTAAAAAATTGATCTGCTGTTCATGGGTTTGTA
CCCATGTCTCAATGTTTAGAAAATATTATCTGCCGTTCTTCAAAAATATC
CTGCCAGTTTGTACCCTGTctcatgaaaataacaaaacGAAACAGCAGAT
GGATAAAATGTTCATTATAAAGTTATTGCCTAGAAAAATCTATCTGCTGT
TCAGCGATGACGTCATTACCTAGAAAATGCTATCTGCTGGTCACTGATGA
CGTTATCTCCTGTAATAGAACAACAGATGTTTTGAAGCAAATTGACCCTC
CTAGAAAAGGAGACCTGCTGTtcactttttcataaaaaaccgtCTCCTAG
CAAAGAACAGCAGATATTTCGTAAAAATGGCTCGTTGAATGCTGAAAAAT
TCGAcaacttgaaaatatttcagCTTGGTGTATGTAGTGGGGGGTGTAAT
AATTAATAATTAAGTAATaacgaataattttgccaaaatttccgaaattc
cgtaaaaaaatgcatgcaattccgataccgattttttttttcctcgtttt
cactagtttttcaacaaatttgatttttcatgtacgAATTCCGAAAACga
gggataaaaactttataataccgaaatttcgaagcaaaaattcctggatt
tccgatacagaaacaatttcagaatttcgaaatcccgaaggaattttgcc
cgatttctgAAATTCCGAAAAAAAAGGTTGATTTCCATAtctccgaaata
ccgtacggtCCCCACCTatgaatataaaaacattcatacAAAggatattg
tacacaaaaaagttcattagataccctttactttctttcttatagtcata
aagaatttcaatcaatatttataaaaagatcaaaatcccgAAAAATGCAA
CTAAAAATTCTCCTTTTACAAGGTTAGATAATGCttttctacaatcagtg
ccgaaatatattggcaatatTTCGGGCATTTTAacctttttcagaattta
aaggtcggctgagaattgcagtttcagtactcTCACTTTGCTTCatttga
tttttcgatttggtaggggtatattctcagccttattggaacatttttga
gctttcagATCCtgaaatcctaaggtcctgagtcttaAATCTAATGtgaa
aactcagagttaaaactctacttccaaAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039017-exon-sc0001993-1491911889:27049..28327 | TCONS_00039017-exon-sc0001993-1491911889:27049..28327 | Clytia hemisphaerica | exon |
| TCONS_00039017-exon-sc0001993-1510915933:27049..28327 | TCONS_00039017-exon-sc0001993-1510915933:27049..28327 | Clytia hemisphaerica | exon |
| TCONS_00039017-exon-sc0001993-1575043694:27049..28327 | TCONS_00039017-exon-sc0001993-1575043694:27049..28327 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001993 | supercontig | sc0001993:27049..28327 . |
Blast
The following BLAST results are available for this feature:
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