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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038947 ID=TCONS_00038947|Name=TCONS_00038947|organism=Clytia hemisphaerica|type=transcript|length=287bp
CACGATACAAGAGACGCAATTGGACTTCAGcttcgaaaaaaaatgaattt
tttaacttttggcgTCATGAATCGACACCCAATACGAGACTTGATTTGTC
CTGTTTTCCTGTTACTGTATTACAAAACTGTCCAACAAACTGATCTGTTT
ACATCAGAGTGTACCCTTCTACCGGAACATCAATGTCACAAAAGAGTTCT
TCTAGAGGAAGCTCAAAACACTACATGCAAAATAAATCAAGTAACAATCC
AAGCTATTAGTAGGTCCTGTATACTCGAACAAAGGAC Run BLAST on NCBI transcript from alignment at sc0001974:12046..12991+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038947 ID=TCONS_00038947|Name=TCONS_00038947|organism=Clytia hemisphaerica|type=transcript|length=946bp|location=Sequence derived from alignment at sc0001974:12046..12991+ (Clytia hemisphaerica)
CACGATACAAGAGACGCAATTGGACTTCAGcttcgaaaaaaaatgaattt
tttaacttttggcgTCATGAATCGACACCCAATACGAGACTTGATTTGTC
CTGTTTTCCTGTTACTGTATTACAAAACTGTCCAACAAACTGATCTGTTT
ACATCAGAGTGTACCCTTCTACCGGAACATCAATGTCACAAAAGAGTTCT
TCTAGAGGTAATAAGAATTCAATCATTGCATCTTTTCTCCTTTGACATTT
CATTTACAAAGCACCACGTCACCCCCTACCTATTCTCCCttaatgttaaa
aacattagaaatttGCACAACATCAATAGCGAATCGTGCTAATGTGCGAG
TATAACGAGTGTAACgattataattattttttgacattttatttgagcta
tttattttatttatattttctttttttttgttccatACACAGGAAGCTCA
AAACACTACATGCAAAATAAATCAAGTAACAATCCAAGGTGAGAGTACAA
TTTTATCAATATTCCATACACATTGCTTTAGGCAGGTATCTGTTTGGTTT
AACGAGCGAGGTGgaataaatattttgttattgaAAAGCATTTCAACGGG
TTTTAAGTTAAAGCCTTGAGAATTTCAAATAACAAAGAGATCTTGCTTTA
ATACCACAATCCTTACATCACGATCCTAAAACGATTAAGTAGCACGCATC
AACCTACCTAAAGTGCTTGGAGTTATAGTTGGCACGTAtggaattatttt
gaaattgcaCACCTTCATCCAGACAGTTTTCATAGTCTTCAATTACGACT
TATGATAAGTTTGAGTCCTGGAAATCTCAGCAACTTTAGTCGTGAACTGA
ATAAGAGAGTTGAAATCTCCTCGATTTGACTGAAGATTAATCTATTTGTC
TCAATTTTTCAGCTATTAGTAGGTCCTGTATACTCGAACAAAGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038947-exon-sc0001974-1491911889:12046..12252 | TCONS_00038947-exon-sc0001974-1491911889:12046..12252 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1510915933:12046..12252 | TCONS_00038947-exon-sc0001974-1510915933:12046..12252 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1575043694:12046..12252 | TCONS_00038947-exon-sc0001974-1575043694:12046..12252 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1491911889:12488..12533 | TCONS_00038947-exon-sc0001974-1491911889:12488..12533 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1510915933:12488..12533 | TCONS_00038947-exon-sc0001974-1510915933:12488..12533 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1575043694:12488..12533 | TCONS_00038947-exon-sc0001974-1575043694:12488..12533 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1491911889:12958..12991 | TCONS_00038947-exon-sc0001974-1491911889:12958..12991 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1510915933:12958..12991 | TCONS_00038947-exon-sc0001974-1510915933:12958..12991 | Clytia hemisphaerica | exon |
| TCONS_00038947-exon-sc0001974-1575043694:12958..12991 | TCONS_00038947-exon-sc0001974-1575043694:12958..12991 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001974 | supercontig | sc0001974:12046..12991 + |
Blast
The following BLAST results are available for this feature:
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