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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038937 ID=TCONS_00038937|Name=TCONS_00038937|organism=Clytia hemisphaerica|type=transcript|length=1200bp
ataacttttttcaatttatttaggtgtaaaatatatataatataaaaaaa
catcaaaataatcaaCCATAAATTCTGTATATATATCCTGCTCCTTGAAA
AAGCATTTCAAAAACAGATGGGCGACTTCAAATCAAGGATATCTTCAACA
GACAAGATGTATTGTGATTAGAATTGAACATCTAACACccaatgctgaaa
aatattctGTCGCAATGATGTTTTTTGAATCATATCTAtaattttctggc
tattttattaTAACAACGAATCAATTTGTCACTGGATGGATTCTTTGGAT
ATCTTGATATATGTGGCTTGGCTGGTAGACTTGGTAGATTAGAATTATCA
ATAGCGATGATGAAAAGATTGCTACTAACACTAACAATATTtggaatatc
ttaaaatttggaTAATGTATTGCTCACACTGTCACTAGAGACAGAGCTCA
CAGCAGGCTACAAACTGAAATTGTGAGGGTTATTGCATCAGtatatatat
gaaaatattCGGTACCCCAACCGTAAAATTGTGATGTATGTCATTTGTAG
AAAGTGGACTAAAATATACAATTGATTATGCCTGGGTCATTGACTAAATA
CAGTAAGTGCCATCTGCCATCCATGGACAGAATctgatatttacaaaaat
aacgtACAGTACATTCAATTGGCTAAAAATGGAAAGAGTATTGAAAGCTT
GGATATTACTTATAAAACTGTGCGCCAGATTTTTAATTTGGCAAGACTAG
TTTCTGGCAAATGAAAAAACTATTGCTTACAGTAGATAATCTTGAAAAAA
TTTATATAGATGAATTCTTTGGCTAGgtaattttaacaaattaaaGAAAG
CAAACAGAAGCAAACTATATTCTAAATTAATAAGTCAGTCATCATAATGG
ATTTAATTTTGAGAGGTAATTCTGGAGGTAGTTCTTAATATTGTGAAATG
CTCTGACTGTTAAtaccaaaattatttgtttgtgTAACTATTTTAATGTA
GCGTAAGGGACTTATTGTCTATACTTTCTCATTTAAGTATCATTTTCAAT
CGTCAATTAAtcctcagaaaaaattaaatcaggtcatctattttcaaaag
aattgcctatttttgtctattattgtattgtgtaattttttgtttgtttc
tcagtattaccaaacaataaataaatgattttgtattttttggttAGATT Run BLAST on NCBI transcript from alignment at sc0001969:27869..29068 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038937 ID=TCONS_00038937|Name=TCONS_00038937|organism=Clytia hemisphaerica|type=transcript|length=1200bp|location=Sequence derived from alignment at sc0001969:27869..29068 (Clytia hemisphaerica)
AATCTaaccaaaaaatacaaaatcatttatttattgtttggtaatactga
gaaacaaacaaaaaattacacaatacaataatagacaaaaataggcaatt
cttttgaaaatagatgacctgatttaattttttctgaggaTTAATTGACG
ATTGAAAATGATACTTAAATGAGAAAGTATAGACAATAAGTCCCTTACGC
TACATTAAAATAGTTAcacaaacaaataattttggtaTTAACAGTCAGAG
CATTTCACAATATTAAGAACTACCTCCAGAATTACCTCTCAAAATTAAAT
CCATTATGATGACTGACTTATTAATTTAGAATATAGTTTGCTTCTGTTTG
CTTTCtttaatttgttaaaattacCTAGCCAAAGAATTCATCTATATAAA
TTTTTTCAAGATTATCTACTGTAAGCAATAGTTTTTTCATTTGCCAGAAA
CTAGTCTTGCCAAATTAAAAATCTGGCGCACAGTTTTATAAGTAATATCC
AAGCTTTCAATACTCTTTCCATTTTTAGCCAATTGAATGTACTGTacgtt
atttttgtaaatatcagATTCTGTCCATGGATGGCAGATGGCACTTACTG
TATTTAGTCAATGACCCAGGCATAATCAATTGTATATTTTAGTCCACTTT
CTACAAATGACATACATCACAATTTTACGGTTGGGGTACCGaatattttc
atatatataCTGATGCAATAACCCTCACAATTTCAGTTTGTAGCCTGCTG
TGAGCTCTGTCTCTAGTGACAGTGTGAGCAATACATTAtccaaattttaa
gatattccaAATATTGTTAGTGTTAGTAGCAATCTTTTCATCATCGCTAT
TGATAATTCTAATCTACCAAGTCTACCAGCCAAGCCACATATATCAAGAT
ATCCAAAGAATCCATCCAGTGACAAATTGATTCGTTGTTAtaataaaata
gccagaaaattaTAGATATGATTCAAAAAACATCATTGCGACagaatatt
tttcagcattggGTGTTAGATGTTCAATTCTAATCACAATACATCTTGTC
TGTTGAAGATATCCTTGATTTGAAGTCGCCCATCTGTTTTTGAAATGCTT
TTTCAAGGAGCAGGATATATATACAGAATTTATGGttgattattttgatg
tttttttatattatatatattttacacctaaataaattgaaaaaagttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038937-exon-sc0001969-1491911889:27869..29068 | TCONS_00038937-exon-sc0001969-1491911889:27869..29068 | Clytia hemisphaerica | exon |
| TCONS_00038937-exon-sc0001969-1510915933:27869..29068 | TCONS_00038937-exon-sc0001969-1510915933:27869..29068 | Clytia hemisphaerica | exon |
| TCONS_00038937-exon-sc0001969-1575043694:27869..29068 | TCONS_00038937-exon-sc0001969-1575043694:27869..29068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001969 | supercontig | sc0001969:27869..29068 . |
Blast
The following BLAST results are available for this feature:
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