TCONS_00038924 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038924
Unique NameTCONS_00038924
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038924 ID=TCONS_00038924|Name=TCONS_00038924|organism=Clytia hemisphaerica|type=transcript|length=135bp
GAATCACTACCCTtagattgttttcttcttttcaacttTGTACCAAGTTT
GCGATCCTATGTTTCGTGTTAAAAATAAAGTGAACTGAAAATTGTTACTA
GCTTTTGAAGTgattttttccccaaaaaatgTAAT
Run BLAST on NCBI

transcript from alignment at sc0001964:29965..30099

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038924 ID=TCONS_00038924|Name=TCONS_00038924|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at sc0001964:29965..30099 (Clytia hemisphaerica)
ATTAcattttttggggaaaaaatcACTTCAAAAGCTAGTAACAATTTTCA
GTTCACTTTATTTTTAACACGAAACATAGGATCGCAAACTTGGTACAaag
ttgaaaagaagaaaacaatctaAGGGTAGTGATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023391XLOC_023391Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038924-exon-sc0001964-1491911889:29965..30099TCONS_00038924-exon-sc0001964-1491911889:29965..30099Clytia hemisphaericaexon
TCONS_00038924-exon-sc0001964-1510915933:29965..30099TCONS_00038924-exon-sc0001964-1510915933:29965..30099Clytia hemisphaericaexon
TCONS_00038924-exon-sc0001964-1575043694:29965..30099TCONS_00038924-exon-sc0001964-1575043694:29965..30099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001964supercontigsc0001964:29965..30099 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038924 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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