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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038859 ID=TCONS_00038859|Name=TCONS_00038859|organism=Clytia hemisphaerica|type=transcript|length=986bp
GCAGCTTCTAGTGCATGACGTATAAAGTCGATATTAGGTACATCATAAAT
GTAAACAACAGCTCGCATTCCGTTAATGAACAAATGAATGAATAAACAAA
ACCATGAAACCGTATCTAATCGCTTTAGAATATACATCGAACGTTTATAT
GGATTCATTCGAAAGTGGAAATACGATAAGGAAGCAAAGACGGGGGTCAG
GTATAAGATGCGATAGATAGGGTTCGTCAGAAATACTGCTATGCCAGAAA
CAATAAAACGTTCGATAAGTCGCCAAGATTCCCaccaaaagaatttttct
ctgTAGGGCTGTTCGAATATTTCTGCGAATCTGTTGCCAATGAAATCGCT
CCTGTCAGTCTCGCCAGTTCTTTTCCATCTTGAGAAACAAGttctcaaaa
tacaaaacattGGGAATATCAAAAATATGACATACGTGGTCAcagaaatc
tttttgtttttaaacaggTAGTAGCCCAAAACGACTGCAAATGGGAAAGG
AACAacccaaaataccaaaaataacatatttgccaCCTGCCACATAGAAA
AACATTCAACAGTACCGTCAATGTATAAGAATGTTACTTCATTCATTGTT
TTGCAATTCAAAAGCTGGAAGACTGTTCTGCAGATATTCTTGTAGCAAAA
AGCGATGATGATATAATACCCAACACAAAATCTCGTTATCAACCATGTTA
ATCTTAAACTTGATGGTCGAAAGTATTTCAACAGTTTTACAATCAAGTGT
AAATTTGCAATAGTCATTAACAATAAAAATGGAATCGTATATCCGTTTAA
AACCTCTCGCCATACAACATTAAACCCCCTGAAAGGACAAAGTGCATCTA
AAACTTCACTGCTTTTAACCATAATATCCATGTTCATAAGTTTATCGATT
AACGTTTTCTCGTTGCTCTGAACTGTTATCAAAGCTTTCAACTGAAAAAA
AGAGACCAAAATATTGAAGATTGATGAAGTAGAAAT Run BLAST on NCBI protein sequence of TCONS_00038859-protein >TCONS_00038859-protein ID=TCONS_00038859-protein|Name=TCONS_00038859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
ISTSSIFNILVSFFQLKALITVQSNEKTLIDKLMNMDIMVKSSEVLDALC
PFRGFNVVWREVLNGYTIPFLLLMTIANLHLIVKLLKYFRPSSLRLTWLI
TRFCVGYYIIIAFCYKNICRTVFQLLNCKTMNEVTFLYIDGTVECFSMWQ
VANMLFLVFWVVPFPFAVVLGYYLFKNKKISVTTYVIFLIFPMFCILRTC
FSRWKRTGETDRSDFIGNRFAEIFEQPYREKFFWWESWRLIERFIVSGIA
VFLTNPIYRILYLTPVFASLSYFHFRMNPYKRSMYILKRLDTVSWFCLFI
HLFINGMRAVVYIYDVPNIDFIRHALEA Run BLAST on NCBI transcript from alignment at sc0001948:28526..29511 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038859 ID=TCONS_00038859|Name=TCONS_00038859|organism=Clytia hemisphaerica|type=transcript|length=986bp|location=Sequence derived from alignment at sc0001948:28526..29511 (Clytia hemisphaerica)
ATTTCTACTTCATCAATCTTCAATATTTTGGTCTCTTTTTTTCAGTTGAA
AGCTTTGATAACAGTTCAGAGCAACGAGAAAACGTTAATCGATAAACTTA
TGAACATGGATATTATGGTTAAAAGCAGTGAAGTTTTAGATGCACTTTGT
CCTTTCAGGGGGTTTAATGTTGTATGGCGAGAGGTTTTAAACGGATATAC
GATTCCATTTTTATTGTTAATGACTATTGCAAATTTACACTTGATTGTAA
AACTGTTGAAATACTTTCGACCATCAAGTTTAAGATTAACATGGTTGATA
ACGAGATTTTGTGTTGGGTATTATATCATCATCGCTTTTTGCTACAAGAA
TATCTGCAGAACAGTCTTCCAGCTTTTGAATTGCAAAACAATGAATGAAG
TAACATTCTTATACATTGACGGTACTGTTGAATGTTTTTCTATGTGGCAG
GtggcaaatatgttatttttggtattttgggtTGTTCCTTTCCCATTTGC
AGTCGTTTTGGGCTACTAcctgtttaaaaacaaaaagatttctgTGACCA
CGTATGTCATATTTTTGATATTCCCaatgttttgtattttgagaaCTTGT
TTCTCAAGATGGAAAAGAACTGGCGAGACTGACAGGAGCGATTTCATTGG
CAACAGATTCGCAGAAATATTCGAACAGCCCTAcagagaaaaattctttt
ggtGGGAATCTTGGCGACTTATCGAACGTTTTATTGTTTCTGGCATAGCA
GTATTTCTGACGAACCCTATCTATCGCATCTTATACCTGACCCCCGTCTT
TGCTTCCTTATCGTATTTCCACTTTCGAATGAATCCATATAAACGTTCGA
TGTATATTCTAAAGCGATTAGATACGGTTTCATGGTTTTGTTTATTCATT
CATTTGTTCATTAACGGAATGCGAGCTGTTGTTTACATTTATGATGTACC
TAATATCGACTTTATACGTCATGCACTAGAAGCTGC Coding sequence (CDS) from alignment at sc0001948:28526..29511 >TCONS_00038859 ID=TCONS_00038859|Name=TCONS_00038859|organism=Clytia hemisphaerica|type=CDS|length=984bp|location=Sequence derived from alignment at sc0001948:28526..29511 (Clytia hemisphaerica)
ATTTCTACTTCATCAATCTTCAATATTTTGGTCTCTTTTTTTCAGTTGAA
AGCTTTGATAACAGTTCAGAGCAACGAGAAAACGTTAATCGATAAACTTA
TGAACATGGATATTATGGTTAAAAGCAGTGAAGTTTTAGATGCACTTTGT
CCTTTCAGGGGGTTTAATGTTGTATGGCGAGAGGTTTTAAACGGATATAC
GATTCCATTTTTATTGTTAATGACTATTGCAAATTTACACTTGATTGTAA
AACTGTTGAAATACTTTCGACCATCAAGTTTAAGATTAACATGGTTGATA
ACGAGATTTTGTGTTGGGTATTATATCATCATCGCTTTTTGCTACAAGAA
TATCTGCAGAACAGTCTTCCAGCTTTTGAATTGCAAAACAATGAATGAAG
TAACATTCTTATACATTGACGGTACTGTTGAATGTTTTTCTATGTGGCAG
GtggcaaatatgttatttttggtattttgggtTGTTCCTTTCCCATTTGC
AGTCGTTTTGGGCTACTAcctgtttaaaaacaaaaagatttctgTGACCA
CGTATGTCATATTTTTGATATTCCCaatgttttgtattttgagaaCTTGT
TTCTCAAGATGGAAAAGAACTGGCGAGACTGACAGGAGCGATTTCATTGG
CAACAGATTCGCAGAAATATTCGAACAGCCCTAcagagaaaaattctttt
ggtGGGAATCTTGGCGACTTATCGAACGTTTTATTGTTTCTGGCATAGCA
GTATTTCTGACGAACCCTATCTATCGCATCTTATACCTGACCCCCGTCTT
TGCTTCCTTATCGTATTTCCACTTTCGAATGAATCCATATAAACGTTCGA
TGTATATTCTAAAGCGATTAGATACGGTTTCATGGTTTTGTTTATTCATT
CATTTGTTCATTAACGGAATGCGAGCTGTTGTTTACATTTATGATGTACC
TAATATCGACTTTATACGTCATGCACTAGAAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038859-exon-sc0001948-1491911889:28526..29511 | TCONS_00038859-exon-sc0001948-1491911889:28526..29511 | Clytia hemisphaerica | exon |
| TCONS_00038859-exon-sc0001948-1510915933:28526..29511 | TCONS_00038859-exon-sc0001948-1510915933:28526..29511 | Clytia hemisphaerica | exon |
| TCONS_00038859-exon-sc0001948-1575043694:28526..29511 | TCONS_00038859-exon-sc0001948-1575043694:28526..29511 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001948 | supercontig | sc0001948:28526..29511 . |
Blast
The following BLAST results are available for this feature:
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