TCONS_00038837 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038837
Unique NameTCONS_00038837
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038837 ID=TCONS_00038837|Name=TCONS_00038837|organism=Clytia hemisphaerica|type=transcript|length=196bp
TAGGACTACGTTTTCACCTGGCTGAAAGTTAACAGGCTTCTTTGATCGAG
AATActtctttttcatcatttctGCATTTTTTACCAGATTTGCATGAAGT
TCTTCCctgattttctttcttttaggcgAGGTAACCTGGAATGGCTCTGG
AGTTTCGTCTTTTGATGAATCGTCATCAGAAGAGGAGTCATCTTCA
Run BLAST on NCBI

transcript from alignment at sc0001944:21031..21226

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038837 ID=TCONS_00038837|Name=TCONS_00038837|organism=Clytia hemisphaerica|type=transcript|length=196bp|location=Sequence derived from alignment at sc0001944:21031..21226 (Clytia hemisphaerica)
TGAAGATGACTCCTCTTCTGATGACGATTCATCAAAAGACGAAACTCCAG
AGCCATTCCAGGTTACCTcgcctaaaagaaagaaaatcagGGAAGAACTT
CATGCAAATCTGGTAAAAAATGCagaaatgatgaaaaagaagTATTCTCG
ATCAAAGAAGCCTGTTAACTTTCAGCCAGGTGAAAACGTAGTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023318XLOC_023318Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038837-exon-sc0001944-1491911889:21031..21226TCONS_00038837-exon-sc0001944-1491911889:21031..21226Clytia hemisphaericaexon
TCONS_00038837-exon-sc0001944-1510915933:21031..21226TCONS_00038837-exon-sc0001944-1510915933:21031..21226Clytia hemisphaericaexon
TCONS_00038837-exon-sc0001944-1575043694:21031..21226TCONS_00038837-exon-sc0001944-1575043694:21031..21226Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001944supercontigsc0001944:21031..21226 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038837 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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