TCONS_00038805 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038805
Unique NameTCONS_00038805
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038805 ID=TCONS_00038805|Name=TCONS_00038805|organism=Clytia hemisphaerica|type=transcript|length=120bp
ATCACCAgtataaaaaaatcatcacaATCACTTCAATCTTGACAGCAATC
TGTATGCCAATTGTGTATCGATAAAAGGATTTTGCCAATATAGAACTTGT
TTGTTTTCACCCGTTATTTT
Run BLAST on NCBI

transcript from alignment at sc0001933:31788..31907

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038805 ID=TCONS_00038805|Name=TCONS_00038805|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at sc0001933:31788..31907 (Clytia hemisphaerica)
AAAATAACGGGTGAAAACAAACAAGTTCTATATTGGCAAAATCCTTTTAT
CGATACACAATTGGCATACAGATTGCTGTCAAGATTGAAGTGATtgtgat
gatttttttatacTGGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023289XLOC_023289Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038805-exon-sc0001933-1491911889:31788..31907TCONS_00038805-exon-sc0001933-1491911889:31788..31907Clytia hemisphaericaexon
TCONS_00038805-exon-sc0001933-1510915933:31788..31907TCONS_00038805-exon-sc0001933-1510915933:31788..31907Clytia hemisphaericaexon
TCONS_00038805-exon-sc0001933-1575043694:31788..31907TCONS_00038805-exon-sc0001933-1575043694:31788..31907Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001933supercontigsc0001933:31788..31907 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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