TCONS_00038785 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038785
Unique NameTCONS_00038785
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length839

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038785 ID=TCONS_00038785|Name=TCONS_00038785|organism=Clytia hemisphaerica|type=transcript|length=839bp
GGAAGATCATCAAGAGATCATCACTCCAATTTTAGCTTGAGACTCGAACA
TGGATAGAGATTCACCAGTTGGTGCCAAACAATCTACTGTTTCTTTAAAG
ACGACCGATATTATTCCAATCAAATACTTTGTCAATTTCTCTGACTACCA
GACAGAAAGCTTCTTCCCACTTGACGAGTTTGGTATAATTGGTTGGCCCA
TTAAGGGAGTTGTCCCTGGTCTGAGTGCGTTTGTTTACGCCCACTTTGAT
TATGGTTTTCATTATCGAAGCAAAGTCAATGACAACGAATATCAAATCCG
CATGCGATTGGATAAGATCAGTGGGAAAATTGAGCACGACATTGACTGAC
ACCTCAGTCTCTGTAAAGTGAAAAAGTATTTCAGAGTCATCATGATTAAA
GGAAAAACAACTAAAGGATGTCCCTCGGGAAAAGTGACCAATATCCATGC
AAAGGCAATAACTGATTGTACTCAATTTGCTTTGAAGACGGTACAATTAA
TCAAGTACATCATGGAATTGATTTTGATGCCAAGGAAGAGTACCTTATAA
TGGACACAAGGCGAGCAGCTATCTAGTGGAGTTTACGGACAGATCCAAGA
GGAGGGTGGCATCAAGCTGTTTCCATATCCTTTCACAATACGAAAGTTCA
GAAATGAGTGAAAAAATGCTGTTGTCATGAAAACAAGACAGGAGGAGCTG
GTTCTCAACGTGCAAGGTTGCCCGGTACTGTTGATTTCGGCAACATTCAA
AGTGGTATTTTGCTGAAAATGTGGGTGGTTGTGATTTTCTATTTGGTTAA
ACTGTTACGTTGGAAAGCTGTGGTATGTATGGTTTGATT
Run BLAST on NCBI

transcript from alignment at sc0001928:6633..28850+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038785 ID=TCONS_00038785|Name=TCONS_00038785|organism=Clytia hemisphaerica|type=transcript|length=22218bp|location=Sequence derived from alignment at sc0001928:6633..28850+ (Clytia hemisphaerica)
GGAAGATCATCAAGAGATCATCACTCCAATTTTAGTAGGTACTATAATGT
GAaacaaaatttcctttttgttattTCGTGATTGCCCATTTTTACCCTGA
AATACTGAAATAATATGACATTTTGAcgtaataatgaaaattttaagaac
ttATGCTTATgtgattgggctcttccagaaaaaaattgatataggGGGTG
GATGACgggaattttcagataaaaaaaaattctgctcaattttttatttc
cacccttggaaattccacataatttgtcaaagttttgaaaaaggaGGATA
gcgaccctgccgacgcaccggatttaacgaacaccggacacgcgaaagtc
cggtgtaaaatgagaatttttttaccaccgtcGAAGAAGGATcctttttc
caccggacaatcaaaacataaatgTCCGGCGGCCAGAATTCCCCGTATGC
AACACCGGATTGAcgccggacttattgcgtccggtgtagcgaaaggatac
tttctGCCACTGGACAAATACACCGGCAGGGTCCTGAAAAAGGTATAGaa
aattccagatttttccaccaaaaaattgattttgtatcgGAAATCCNctg
gacaaatacaccggacagtccggtgcgtcggcagggtcctgaaAAAGGTA
TCGaaaattccagatttttccaccaaaaaattgattttgtatcgGAAATC
CAGGACGCAGGAGTTTCAATTGCTTTTAAATTGGGAAtccaggaatttca
aaaaaacattttgccttAGAATTCCGCTGTCGTGCACCCCCCTATAACGG
ACTTtaactggaagagcccattggagtgatccaatttaatttactgtcag
tacagtcaagtatcaatatttgaggtattacgaaaatcgctactttttgc
cgtaatcgctttcgtttttaacataaggtcttagcaacgggtaccccggg
catagttacggggcattgagaaaaaatcctgacatagaatttcaaaaaga
ttcacgctatcacattctacattacaaaatacacctgttctatgttgggt
ttttttactcggtgttttgtaggcttaattatcgtcatgcaaagtaaata
aaaacccctggaaatctttaggttttgataagcaaaatacttacatacta
ttgtttacttttcaggtattcatccaatcagaattcacgctcagaaactt
tcaaccaatcaagattcaaccgtgacgcgggaaatgatccaatcagaata
ccgaagctaaagacttacatccaatcagaatttgttagcgagcggtattc
atccaattggaatcgcgtaacacgaaagcgaaagtgaaagtaaaggcgga
aatatattcttttttcgacgtgatttgcatatattagaacagaaagaaac
gccaatttgtcaaagatttgtttaaaaccaccttattaTTTGTTGAAtat
cgcctaaatttatcgaaatgatatgcttttcaatattaatctttaaatct
cttttattgttaagtatccccgCGGCGCTCAGcaccgaaagaaaaataag
cgggcggaaccgccctcgtagttaaatcccgggattgaaaaaacctggag
aaaaccttttccgtacatataatgtagctaaggaattttaaaacacggca
tttaaagtgaaacaagatgtcggagaagtagtgattggaggtttttgtaa
ttagacagcatggcaaaggtttgttatattttagcataacaaagacaaac
tcaggaggtaaggtaaattgcgttttgactgcttttaactgtttttctaa
taaagaatatcttNTtaactggaagagcccattggagtgatccaatttaa
tttactgTAATCGCAAtgaaactcatcgaacataatcgtaatcgaacggt
CGAAATCAAAGATTAAGCAATTGTAATTGACAttcaatcgaaccaattga
acatagtcaactatcaatagAACCAATTTAACCTTAGGCGGTCAtcaaaa
aaatgctctgttctcGTCGCAGCGAGTGtaaaaaatgcatgcgggcggac
gggcggtcaaaaacattcccaggttttttttaatcacgccagtaactcag
gggcgggtggtaacgctagcaaaacaatttttcgatggtcgtcagagcaa
ttgagaaaaaagctatgcTTTAAATgacagtgaagtcaagtttgaagata
ttctttttagaaaaacagttaaaagctaccgtgagtatcacggCGCAAAT
AAATTCGAGCTGtgaagacaaagtttttttttaatacaagatcttgtaga
aaaacgcTCGCAAAGTGGATATATTTCACAGTTTGGATTCGTTTGGCTTA
GAGGAGGTTGCGGATCATGTCTCatttgctttttcagaaaaattgtgAGA
AATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaagagattttaagat
taatgttgaaaagcatattttttcgataaatttaggcgatactcaacaaa
aaataaggtggttttaaacaaatctttgacaaactggcgtttctttctgt
tctaatatatgctAATCACgtctaaaaaagaatatgtttccgcctttact
ttcactttcgctttcgtgttacgcaattccaattggatgaataccgctag
ctaacaaattctgattggctgtaagtctttagcttcgggattctgattgg
atcatttcccgcgtcacggttgaattttgattggttgaaagtttctgagc
atgaattctgattggataaatacctgaaaagtaaacaatagtatgtaagt
attttgcttatcaaaacctacagaattccagggggttttatttactcTGC
ATGACGATcattaagcctacaaaacaccaagaaaaaaacccaacatagaa
caggtgtattttgtaatgtagaatatgatagcgtgaatatttttgaaatt
ctatgtcaggattttttctcaatgctcCGTTACTATGCCCGGGGTActcg
ttgctaagaccttatgttaaaaacgaaagcgattacggcaaaaagtagcg
attttcgtaatacctcaaatattgatacttgNNacaaattgcttttccca
gattttttcccgcatctccgcaccagaaaatcagcgaaaaatttgatgca
gcgggtgacgcgaatagaacaatttttcgatgaccgccttacTCAAACGC
AATCAAATATTTCCCAGGAATTGGCCATTATTTGATCGCATTTTCTTTgg
agttgttcgattgacaccgtctggttatgTAAACCAGACGGTAATAATCG
AATGTTCGATTGTgatcaaagtaatcaataatgatcgataataatcgaag
gtGGTCAGTGACCACCTAACGATTTTATCGGTGATTTGAATACTCACTCG
ACTCCTgattatggcattttcttcgaccattttttatttgttcaatcatt
tcgatTACTTTTCGATTNTATGGCATTTTCTTCAaccattttttatttgt
tcaatcatttcgattacttttcgattatataccttcgatcatattgaata
ccttcgattGTATTTAGTaccggcaagtacaaaacgcctactacctacta
cttaatacttactacctactacttactacctactgtaaaatagctcaaaa
cggcTCGAAATTACCTTCAAATATTCAGCatgttaaaattagcaaaatct
gaaactttgggggtaaaaaaattaaaacttcttcttttatcgtactttga
agccttcaaaatattttctctcttttattttgtttatgactttttcccgc
gctttttctataaagtttacaaaCGCACTTCTTcgtagaagagaaaaata
attcCTTCGCACACTTATTTATTCAtgtcagttttatttataagaatcaa
tcaatctaaaaagttaaaatactaTAAGTAAGTAGAGCCCTATGTTTCAC
TGGGTACTTGCTGAAAATCCCTTGACATGTCTTtgacatttattgacaaa
atgacccttttgaACCAAACTATTGACAGGGTCGTTAAATATGACCTTTG
CAGACTTCATTTTATGAagcaaaaattcttattgtgcTCAATAAGATGCT
TTCAGTATCGGCTATCGCAAGGTAGAAACTTTCAGTAGGAAAATACTAca
aagagctgttttagaggtgTCAATTTGACCatgtcaaatatttttgataa
aaatattgacacagtTATCGAATATTAAAAGATTTGCAAAccaattccaa
gaaatattttggcaccATTTGATATGATGCAGATTATACAATAGGATAGA
GATAGATTGACCCCCTATTTATATTACAGAGCCTTTTTTAGACATTTACG
TGTATTCTTATCGTCAtataataagagtcataagagagagtacgtttagg
aaaaaggaaagttcttataataagagtcataaAAGAGAGAGTAGgtttag
gaaaaagaaaaaatcaagataatgACCTTTTGTTTTATACTTCAGTATAC
TTATATGAGGCGAAGAGAATATTTATTCACTACGTAAATatgctaaatat
tcttttagataacacttTCTTCAAGTAAAGACTTGTGTGTTAGCATTCAG
ATGTTACAAAACCACTTTTTTTAGAATAGAGATTTCGAACAAGCGAAGGt
gagttctggtctgtaaagtatacaaactgagtaggtagtaagtagtaagt
agtaggtagtattTAGTACTTTCCAGCctttgattttatcaaatatgttt
ccagtagcagcgcgtcaaaataatctgaaaccaagttTACTTCGGCCAAT
TAAAACCCGCAATTCATGCGTgaaaaaccactttcgttttctctgaCCAA
TCAacttgaggaaacccagggcgaAGGCTCACAAAATGGCGGGGAAAATC
ACTGGGAAATAAGGGGTTAATCTTATGGCGGGCTTCTTTTTGTCCAGGCG
TACCCAATCGATGAAATCGATACGGGAAATcaatcgatattaatcgattt
taatcaATAATAATCAATAGTGATCGATAACTAAACGATAATCAATCAAT
AGCCAATCGATACTAAGACTTTACGTTCTTATCGATTGGattcgattgtt
atcgattaCTATAACGTTACAATATTATCCATTATCGTCCACCTCTAAGC
AAAACGCactgtcgaatatttttagatatctgatagcaaaatatctcttc
tgtagcagcgagcataaagaaaataattttttgatcaaataattatttaa
atgtcacataaataaaacagataaaagaaagttctttttaacaaaagaga
aaggaaaTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGTTTtgtaa
ttaaagagaaaaaaacaatgaaattgacatcCTTAAATAAGatagtaaaa
cgttcgaaaatgttataaaaagagagaaagactGAATGACAAAATAATCG
GACAAAAAGTAAAATACACTTTTGCTAATTGGTGAACGATAAACCATATA
TTCAACGTGAAAATTCGGATGTCGAAATTATTCAGTCTCGCTTTATTGAT
ATTCGACTCAGCTTCGCTTCGTCAAATAtcatcaagctcgactgaataat
tttcgatatccgatttttcttgtcgaatatctgcttaatgtaCCCTTAAT
AAGTTCTACAGGTCAGAATATCTATAGGTTTTGTTGATTAGCTGATCTAC
AAATCATTATCCAGCTTAACTGAAAATGTTGATGTTACATCATTATCCAG
CACTGTACAAAGTTCAGATTAGcatatcttttgatattttaaagtAACAA
AAATTCTGTTACTAGATTATCCAAGCAGAACACTTCACCTAAACCATCAG
ACTAATCTGAGTTACGATAAGAAATTGTTAaccatcaaaatggataaatt
TGTAACAAAGGCATGAAATGTCACAAGAGACCTTAAAAACTTGCCTTTTT
TAATGAACATGTCCTAccgtggtttttctaatttaacgcgtggcaataaa
taattattttcgacGCTACGCATGAAAAACTAGAGAACAATTAATTACGA
TATTCAAGTGTTTTAAGTATGCATTAAAGGCTTGTGTAATATATATTACA
TATAGATCGTATAATGTATTAACAAGCATTAGCTGATTTGGAGGAGCCAG
AGGAGGATGACGAAGATCCCTTTAATTTGTGTTTTTGAAAGAAAGAAGTT
TATCAGAAATAAAACTTTCCTGTCTAATTTTTCTTGTCCAAGGCTCGATC
ACGCGTAATAATTAGAGTGAAattaattatgcagaattttggctACGCGT
TAATAATTAGAGTAAGATTGATTacgatttttcgccaaaaacAGGGTACC
CGTTAAATTAGACtacgcgttaaattagaaaaaccacggTACATGGTATT
TGGCCATTCCTATTCCCCTGTGCATTAATCCGATTACAGTGATTTGTTTG
TGTGATTCTACCCAATACAAGCCCTGGTCGCCAAGAGGGTTACAATTGCG
GGAAATTCGGCCATCGAGATAGTTATTCGGTCAGTggatgttaatgttaa
tgttaatgtatatattctttaaagtcgaaaaatgtgtacaaatctgtact
agcttgaaagctaatagagttcgactgcctattttacaaaatgaATCATT
CATCATCATCTGTCAATGCCCAATCGCTGACGTTTTCTTCCGTAGAGCAT
TTTGGTTtgtaatttgaagatatttttgtttggttttgtaattttttaac
gaggcgtagttttgttcttgggcttcctcttacgcgCCAGTTGANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNatctttatccattttgatgttattttcatgaat
tttgatgtttttatttgttttcagccattttttcgaagagccttgcaaaa
gcgtctgatctagttgacgtcaaataaaaacttgGATAGTCGTCCACCGA
CCGGTGGAAAATTGGTCGTCAGAATAGTCATCCGGCCGTCGAAATACTTT
ATTGCATGAAAATTTTGCGGTTTCGCGGTCGAGTTcagaaaaccgcgaaa
ttaaaatgcCGCGATAAACGATTTTGGAGCTCAACCGTGAAATTAAAATG
CCGGGATTTTTTGggtcaactgaaaaaaaaaccctaaaagtagagtcttt
tttgcaaaaaaatgcaataatCAAGACAAAATTCTCTTGGaccgcgaaat
taaaatgcCGCAAATTGCAATTTTGGGCGAAATTAAAATGATCGCAAAAT
TTTCATGCCGCAAAATTTTCATGCCGCAAAATTTTCATGCAATAAAGTAG
TTACCCGGTCGGCGAAATGGCCGTCCGGACGGCGGAAATCTTATATCCGG
CCGGCGGAAAATTTACTGTCGGAATAGTCACCGGCCGTTGGAATAGTCAT
CCAGCAAATggaaaattggccgtcggaaAAGTTATACGGTCAGCGGAAAT
AGAGGCCGAGCTGGTTTTTTTTCGAGCTAGTTTTATTTCGCCGGTCAGAc
aactattattattattaaattcccgcgaaactTCAGAATTTTGAGCtctg
aaccgcgaaattaaattccgcaaaaatttcttcccgcgggaatttcttcc
cttaaagtacgctacgatattatcgtgagatacactctggtacacagAGT
AGCGATCATACATACAGAAAATTAGCACAATCGATCGCAATCGATCTtaa
tcgataacaatcgaatTCAATCGATGGCTAATCGATAATAATTGAATTTA
ATCGATGAAAATCGATACCAAtcgataataaaattttacgttCCTATCGA
TTGGCCATCGATTAGTAATCGATCGATCATCGATTACGAACGACTTTTAT
CGATTGACATCGATTAAATCGACAATCGTTGTTATCGATTGGGTACGCAT
GGTTTTGTGCTTTCGTTCTAGgtcagtttttttggtttttctaaaaGATA
TATCTTAGTAATTTgttatcgaagtaatcaattggttatcgaagttgtca
aagttatcaaaattaatcaataacaatcaaagtactcgaaCGGTTATCGA
CTCTTCAAAGGGTTGCTAAGAAAGTGATCgaaaatactcacaattttttg
aatttttggtaTCAACATTCGATTCTTAATCGATAAGTGGTTGTTCAatt
acttcgatcattatcgattacttcgatcattatcgattactttGATAATC
GAACttatcgattagtaccgtcaggtgtaaacaaaaaaatagcaaagttg
atttcgagcaaatttataattgaatatttataagataaaaacattctatt
tattttaaacataaaaacattcaaaagagtatcagtaaaagtccctttgt
ttgaggaatgtttttttattcaatgtattgttattttttttaaacctttt
tctaatcttgttgCACTTGTtttttactacatcagcatcatcagaccttt
caatcaaaacaaaacctttaatttgtgttattgttttgatgctggagcct
tatatttttattacaatTTGATTGAGTTATTGTTCAGTTCAGTTATTGTT
GTCCGGGGGGGAGACTTGGGCAAAAAAGGCaaataaaggtcagtgatagG
TAATCACCAGACACTTTTTGGTTTTCACCTGCCATTTTGAAGGATAAATT
ATACTTTTGTCCGGTGAAAACTTGAGATTGCTtgtttgttgaaaaaatgt
aaCAAAGCACTTTTTGTCCCTGCTCTGTATATATACAAAATTTTGTcacc
ccaaaattttttgaaaaatcactgGTTAAGTCACAATTCCTTATTTGCAA
CATTGCGGGGGATGTGTTGCCGTCCAGGGTACCTTCACCCATAAGTCCAA
GGTAGGGCCGCAAAAACAcccaaatagaaaaatcagtcccattatgaggg
actgatttttttatttgaaagtagggtagcatcattggtaaaagatgact
caacaggactcaagcagatttttgcaaaaaaatttttttggctaaaaagc
acatctttatctataaaaatcactatttataagcatatatcgatgttctt
agccaaattactcaattttttgatgagatagatatttttttgctcatgaa
ggcttaattttgaagaatatttgtgtttagacatgaaattttggctgcta
cacgtctttttttagaaaaattggccaaattcaatatttttttataagca
cattattaCCAATTACttagttattagcttttctcgtgATTGTCTCATTc
atttcttctgattttttgcacaaagatgcataactataaaccctcgaatg
tgacggagcccgatttcgGAAAAGATTTAAGGggcaaattccagccaaaa
aacggctaaaaaaagtgctttttggattttgtgaaatattttatcattaa
taattttaccaaaagtttGAATCAATAAACtgtttaaggtatgtgtacac
cttttttccgattttttgtcaaaaaattttttttcagtcaaagtggaaga
aaagttactggatttcattttggtaaaatcgtgatcttaacatcattttt
tgatccagagttataaccatttaaaatttcaaaacaaagttcgtcttata
atggattatttactcaaataatcgtctctttcggaaacaacaaagacaaa
aaagagaattcagctgatgtttattctcacctctattgaatagtaaaaaa
ttaaaacattttaaagtgCTTTACTCGCAACAATAGAATGTCAACAAAGC
AAAACATCGATTCGCTTCGCAACAAtggaatgttttctttttgtggTGTG
TGTACCACCCCCTCTCGCACGCAGACAAAAATAAAACGgtagaatattta
aaaacagaacattaaaaccaaacaaaaaatgtttttacagTTTCTTAATT
ATTTTAATTAGCCACCTGAAGTAGTGCAGCCCTTCAggcccccccacttt
tttaggcccccctgagtttaaaaaatgagtCCAGCTCCCACCCACTTTTA
GGGCGATTTTAGATTTACACCTCCAAATAAGTGGGGGGGAGNCCCTTCAG
GTCTCCCCACTTTTTTAGGCCCcccctgagtttaaaaaatgagtCCAGCT
CCCACCCACTTTTAGGCCGATTTTAGATTTACACCCCCCTACACCCCCAA
ATAAGTGGGGGGAGCAGAGCCATGGTgacagaaataaaaattttacccAA
GTTGGGTTGAACCAGCAAGCGTTGAAACCCTTGATTTGACTATTGCTTTA
ATCCTGACATGAGTTACCACAACAGCTTGCTACGAGAAAATCAAAGGGGG
GAAAATCTCCCAATTCTGTCTGAATTGCACTGATACAAAAGCTTCAAAGA
ATTCTGCTACAACAGCTGGAGCTgcctaacctgataacagctgttcataa
ttttcttacgtgcacggtaaacctctgaaggcacttgaaaattatacatc
tgaggaaaatagtcctcccacggaaaatttacaacaagaatcttgttgtg
cgccagaaagtcaaaaactgatacggcgccctattcgtaaacacaatcac
gcaactttgttgtcatccccagtccttttagNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAgatagcatat
tcgtcagattgtatgttttcacccatccctttagagcttcagcgtggtgg
gcagaaaacaaccacaatctgatctcaggttagagCTGGCTCGATCTGAA
TCTGATCCAACTTTAATAGGCAATGCTATAAAAGAAAGGGCAGTTTCATA
GACAGTAACGTTTAAAGCTTGTGCAGCGCTGGAAGGaactttcttctttt
gttgaaaatgctCTGTAAGAAAATGATATTTAATAACAAGTtaaattata
tctttcaactttaATTTCAAGGCTTGAGACTCGAACATGGATAGAGATTC
ACCAGTTGGTGCCAAACAATCTACTGTTTCTTTAAAGACGACCGATATTA
TTCCAATCAAATACTTTGTCAATTTCTCTGACTACCAGACAGAAAGCTTC
TTCCCACTTGACGAGTTTGGTATAATTGGTTGGCCCATTAAGGGAGTTGT
CCCTGGTCTGAGTGCGTTTGTTTACGCCCACTTTGATTATGGTTTTCATT
ATCGAAGCAAAGTCAATGACAACGAATATCAAATCCGCATGCGATTGGAT
AAGATCAGTGGGAAAATTGAGCACGACATTGACTGACACCTCAGTCTCTG
TAAAGTGAAAAAGTATTTCAGAGTCATCATGATTAAAGGAAAAACAACTA
AAGGATGTCCCTCGGGAAAAGTGACCAATATCCATGCAAAGGCAATAACT
GATTGTACTCAATTTGCTTTGAAGACGGTACAATTAATCAAGTACATCAT
GGAATTGATTTTGATGCCAAGGAAGAGTACCTTATAATGGTAAGATAATT
ACCTGTGTACTGTTATTTCAAATCAATAATCTGCTTACTCTCCAGGTGAT
TTTTTAAAGGCAGGTTCTTTCCGGTCTTTCAACGTTTCAAATCATTTTCg
taagctcattttgggctcaaaaaaAGGGTATAACTAAGTAGAATAAGATT
CAGTCAAGGCAGATGTTTTatgatttagaaattttgcgtaatttgctaaa
aacctcaattttgcgctattttgatgaaaaaaatctttacaaTCATGATG
GCATCAGCATTTTTTAAGTGATTCAGCTGAAAAGTGATGACatgatcaaa
ttaaaaaaaaaattgtattctgATGGTCAAAACATGGCTGGAAccaggag
gggggggggggagaaagGGGGGGCAGACATAGGAAACTAATTTTAacctg
tggctaggggggactaaacatgttaggggtcaccaaaatttttttagatt
gacctgggggctagattctatgtatgtttggtgatttttttctgaacttc
ttgtttttctttcatcatAAAGTTTACTATGGAATGTCTTCTGTCTAAAA
AAGTGTGTTTCTGAGAAAACTGTGTGTGCGCTTAGCTATTCCTAAAAATT
TGCAGCACGTCTTCATATTGTTTTCTAAAGATTTGTGCAATAGCGCGTCT
TCACTATAGATGTAAACAGTATGCGTAAAAAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCctttccccctcggg
ccaaaccatggttggcccttgcggtgtcactaaacttcagcccccctaat
ataaaaatgcttcctacggcactgatctgtaataattctttaatcctgtt
gcatttaattagataaaaaatctgtctggcaAGGGATTTGCACCCCTAAC
TTACAAAACCTCGATAATCTGGCATGAACCTTCAGAACTTAGGTTATCTC
TTATTTCTTAGGgtatttattctatttagcaataagctaaactaactgct
gtatttgtttgattgttggaaaataatttttgaaaaaaattgacgtgtca
ttggcttaggggtcacctaaaatatttggcaaccaggggttacctaaatc
ttaggggtcacctgaattcttagcacctaaaacctgctgccaagctatgc
aaaatttcaatttatttcattaattatatcaaaatttagtttcaattttt
atgatcatcaaaatagcaaaaatctATGCAAAATCAGATTTTCATTTCAA
CCGTAACATTTCGAGGTGAATAGAAAATACCACCTATCAATCAGCTTTGG
GGCAGgctgaagacttcaaaaaatggtctgatacatcaaacattttcttt
tggtgtttacaattgggcctacaaataatttaaaagatactgaagttgag
caagtgcggttagcacgtagGACGTTTTTATACTCAGAATTCAACTCAGC
TCACTTTCTTTCATGTAGGCTTATCTGTTTTGGGCTTTTAAATTTAAACT
TAAATGGAATGGGTGTTTTCAGTGTAGCTGACAGAGTGACCAATCTTTCA
CAATGTATAATTGAAATACGAACCTCTTGGTATGTTTTTATTACAGGACA
CAAGGCGAGCAGCTATCTAGTGGAGTTTACGGACAGATCCAAGAGGAGGG
TGGCATCAAGCTGTTTCCATATCCTTTCACAATACGAAAGTTCAGAAATG
AGTGAAAAAATGCTGTTGTCATGAAAACAAGACAGGAGGAGCTGGTTCTC
AACGTGCAAGGTCAGTTCTTGGTTCACAAATTGCCTTTTCTTTCGAAATT
TCCTATACAGAGAAGGATCTCAATAACTTGAATCGTGTTGTGCGCAgtta
tgtaatttttgcgcagatatgtaattatttacATACCACACCCTTTACCA
CGTCCATTTAACATCCATTAAACGTCTTTTTCGTGATAATTACTGGTGAC
gatggaattttgaaatgaaatttagcATGATAGGGCTTTGGTACATACCA
CATCCTTTACAAATGATAACGTCTATTTAACATCCATTTAACATCTTTTT
CATGATAAGTACTGATTGGgattgaatttttaaatgaagcTTAGCATAGT
AGGGCTTTGATACATACCACACCCATTTAACATCCATTTAACATCTTTTT
CATGATAAGTACTGATTGGgattgaatttttaaatgaagcTTAGCATAGT
AGGGCTTTGATACATACCACACCCATTTAACATCCATTTAACGTCTTTTT
CATAATAATCCATTTAACCTCTTTTTTCATGATAACAAgcattgaatttt
caaatttcgatgGTTTATACCACACCCTTTGatattggaaaaaaatattc
aacgtCCATTTAGCATGTATTCATTTCTAGGTTATTTAGATGTATTTTCA
AATAAGGTTTCACACAagagatttcattttcaatatcaaCAGAATGAACC
CTGATAATATCAATCCAATATACCCCTGTGTCACGTCTCAGCTGGAAGAG
AACtttccatccccattggaaaaaatgaaatattatacTATCCCCAGCNC
GCTGGAAGAGAATGCTTAAAATTCCATCCCCattggaaaaaatgaaatat
tatacTATCCCCAGCCCCACACTACTAGGCCCATGTTCAATGTATTTCAT
CGTCTGTCATCAAGTTTTATTTACTGTCAATTGTAAATTATTGACAACAA
ATTGTTTGCATCGACCATCAATATTCCCTTTCTTACAGTCAATGATTTGT
TTAGACTGTCAATTATTTTGTTGGCAGCTGTCATTGTAAGTAACGAACGG
TCAATGCAaaaaattgtcaatatattcttttgattttcaagaaaattgat
tgacagTCAGTGTTAagtattttttgtcaataatttgattttgacagtca
ataaaacttgctgacagtcaatgaaaaacattgaacatgggcctaatcaa
tgttttttgacctaccttaagggaattaatTCTCGCGGcaactaattttt
gcgagaCAGCTCCCAcgcgaaataatttaattttcgacTGTAAATTTTCG
tgaggatttaatttcgcgaattggcaaattttttcagattttcagatttt
tcgttAGTTTGATTACGTGATTTTGTCTGTACAGTagagtttccataact
cgaacggcTACGAGGAatgaaaattattcaaattatagagacattcgagt
aatgGAGACTCATTCAAGAGAGTTTCTTTATAGCTGaaagaatttttaat
ttcttaattttcgcgggggttatttttcgcgaaaaaggcaaAATTCGCGT
AATATAATCCCAGCGAAAATTTATACCCTTAAGGTAGTAGTGTCCATTGT
AAAAATAAATCTTAATTGCCCATCCCCACTGGGTACTTGTGATTGAAAAC
ACTAAAAATCAATATCCCAATCATAAAATTAAAGGGATTTTCCGTCCCCA
CTGGGATATTTTTTCCTGAATTTATCCCCCTTGGcgataataaaaaatca
taacaaaaaaGACGTTGGATGGATACTAAATGGAAGTTACATACCAGGAG
TCTATCATAGTTTcatttaaaaactttcttagAAGCTATCATAAATGGAT
GTTAAATGGGCATTGCCAAATTCAAAGAGTGTGGTATATACCAAAGCCCT
ACCATGCTAAGTTTcatttaaaaactttcttagAAGCTATCATAAATGGA
TGTTAAATGGGCATTGCCAAATTCAAAGAGTGTGGTATATACCAAACGTC
TATCATgctaaatttcatttcaaaattcaatcgTGATCAGTACTTATcat
gaaaaaaatgttaaatggATGTTAAATGGACGTTATCATTTTCAAAGGGT
GTGGTATATACCAAAGTCCTATCATGCCAAGTTTcgtttaaaaatttaaa
cccaatCATTAATCATCGTGAAAAAGACGTTAAATGGATGTGAAATGGAT
GTTGTCATTTTCAAACAGTGTGGTATGTACCTAAGTCCTaccactttttg
ataaataacgagattgctcacaggaaagcgaaaaatcgacgttttgggcg
ttttcagatgacgtcagcattttcctagaagcattttcagaaaaaatcat
tcccacggctggatagccctgaattagtagtatccaaaaatggtatcgTT
TGTTAACTTTCTATGTCTAAATCTGCTGGCCTAGGATAAGGCATTGAACA
GTCAGCTACCGATGTAACAGTTTTGAGAGTTCGAATCCTAAACGGTGCGT
TGTAGTAtgtgttattttgtcagcattgaccaatctttttctggttttat
gagctcttattgatatttttgaaaattcccgttagaattttaataaacaa
aaattttctaagtaGTGTTTGAGGTTTGACTTTGTCATCAAGTactttat
ttcaaaatggatcaggttggTTAGCAGATGGAAAGGCAATAGTCTCATGA
CTTttccttctcttgaaaatccagtattccaaaactataaaaatacataa
aaatcgactttcgtctttttttcCTATCTTACAAACACCtttttcagaac
cacaagtGACTGAATATgctgctaaaaaatgattgacaggtctaaaaaat
gattgacaggtgcgggtttgctcgcgcgggttagaaattcccgtgagcaa
tctcgttatttatcagaatGTGTCCTACCATGCCAAGTTTTATTTAGAAA
TTCAATCCCAATCATTAATTATCATGAAAAAGACGTTAAATGGATGTGAA
ATGGACGTTGTCATTTTCAAACGGTGTGGTATGTACTTAAGCCTTATCGT
gctaaatttcatttaaaagaaaCTAAGTCCATACAGTAGGATGAAAGTTA
TTTTAcatgctgactgaaattcgcAAAACTATTATCATAAAACCGTTCGC
TAATTACATAACTGCACAGAAAATAATTACATAGCTGCGCAGCTcgaaaa
ttacatatctgcgcaaaataattacatttcTGTGCAAGATAATTACATAT
CTgtgcagaaattacatatctgtgcAAAAATTACATAACTGTGCACAACA
AATCTCTATATATATCTCAAATTTTTCCCTAACTTGTACAGATTTAACAC
CCCTTGTTTATTTGATGGagtaattttttgttaaaagatgAATTCTCATC
TTATTTTCAAAGTAATAACATGAGATACACAGGTTTGGTTAAATTTTAGT
AATTCCCAAAAATGTGACAGAgcacaatttttgaagaaaagtattttttg
ttttcaggattttcttattagaattttctgatttcttttattttttaatt
taaatttaagaccaagtaaataatccatcatgaCACATGAATTTTCAGTT
GGtatttgaaaatctatttaTATGTCTATTTTtggtgacccctaagccaa
tgatACGTCAAATTCTTTcgaaaatccttctcaaactatcaaacaaatac
aacagttagtttagcttattgctaaatagaataaatgccctaagaaatTA
GAGATAAGCTAAGTACTGAAGGTTACTGCCAGATTATCAAGTCAGGGTGT
AGATCCCTTGCcgacagattttttatctaaggACTAAGGAAATGCAAcat
gattaaagaatttttacagatcagtgccgtaggaagcattttcatattag
ggAGGCCGAAGTTTAGTGataccgcgagggccaaccatggtttggcccga
gggggaaaattttgaaaatttgagctctagaatGCTTGGAAATGCACTCA
AAGCATGCACttataagacaattatgacaaattcaaaaagaaaactttgc
aaaataaccatttttgaaaaaattattggggttATAGTCACCCTTGCCCC
CCCCCTANtaaccatttttgaaaaaattattggggttATAGTCACCCTTG
CCCCCCCCCTatgctacggcactgcagataatatattagataccaaattg
tcagtttttgagcattgcttagattaaaatataagttGAGAAATGCCAAC
CTATGGTCTGGTAGGCTGCTTACAAATcaatcaccaaacatagaatgtag
cccccaggtccatctgaaaaaatttaggtgacccctacagggttagtccc
ccctagccacaggctaaaatcaggtaccaatcGCTGCTtgaccttttagc
ccccccctgCGGCCAggggggggttccagccatgaTGTCCCTAACTAaag
tttcagtttcagtttcagcctttttaaaggctttttttaaaggaatacca
atcaaattttaggttttgaagcattttaTTCTTGTTTCTATTATTTTAGT
GCTTATTTAAATTTAATGACCATCATCCTGTTCTCATGGAATCGTAGTTT
CAATCTTATGTTCAATAATGTTGAGTATAACTTGTTTCTTCTTAATTCAT
AGCTATTATGTTTATCAAGATATGAGATTGATGTTATAAACCAATTTTGG
AGTGAGATTGGAATACAATGATTATTTTCTACCAAAATGTGGTTATGTGA
ATGTTTTGGTAAGCATATCTTCCAAAATGTAATTTCATACTCTTGTTCCA
AccaaaacttttgatgaaacaCTGGGGTGTGCTTATTATGCctattaatt
tcaaattttggtaaaTCATTTTGATCAGAAATTGCAgattatttgatttg
attttttcagcaaaatgCATGCGCTTCGGTCAAATATCAACCTTgtaata
taaaaaagatttaacatTTTCACGTATTTACATTTTATTGATGGGCTTTT
ATAGAAATTGTCTGTACCCCCTGTTGAAGCTATCCATTTTTGAGCTCCAC
AGCCCCCTGGATGTATGGCTTTAAAATAAAGATTCCCTGATGGATATCCC
CTTACTCTGCTctagaccccctggatatccaagcatTCTGTCTAGACTCC
CTGGATAAATTTTGCATTATACTCTAGGCCAACTTGATATCCTTAAAAAA
GTTCTCTTGAATACCAATGAACTCTTTTGAACAGTCATCGACATTAATTG
TAATTCTTGTATTGAGCCAAATGGATACTTCTCAATAGTTCTAGCATcac
aataaaacaaatgaatgaTATGAAATAATAGAAATAACTGATTTCTTTTT
TCCTGCTACAGATAAAGTTTCTTTAATATCAATAATTCCAAAGGTATACA
AAAGATTGTAAGAACATCAAGAAACATTGAATACTTTTAGAAtagttatt
ttccttcaaaaatacatgaaaaatcaatgcCATTTTCCTTCATACAAAGA
ACGTCGaaatcattttccttcaaaagcgGTCAAAAGTACAAAGAAGTTTC
TTTAATGTCAATTCAATCAGTATACAAAAGATTCTAAGAACATCAAGAAA
CATAGAATACTTTTAGAAtagttattttccttcaaaaatacatgaaaaat
caatgtcATTTTCCTTCATACAGAGAACGTCGAtataattttccttcaaa
agtacAAAGAATATAGGGTTTATTCTTCTTATAAAGATCTTAGAATGTTG
GATTTGTTTTCCttcggaaaataaaaataatatcagGCTCATTCTCCTTG
TAAAGTACAGATGCTCTATTATAGTCATAACAATTTCAAAGAGTGGTCAA
AGCAATCTTTTCACAAAATGTGATAGAATGCCTAAAAGCAACCCCAGGCC
TTACCCGAAAGTTCgaatttctcataaaaaatgtttaattcATGCTCaaa
tattgaaagtttttttctgatccTCAGTGAAATATTTGAATTCATAAAAA
TCGNTATTATGCctattaatttcaaattttggtaaaTCATTTTGATCAGA
AATTGCAgattatttgatttgattttttcagcAAAACAAAATGCATGCGC
TTCGGTCAAATATCAACCttgtaatataaaaaaaatttaacattttcacG
TATTTACATTTTATTGATGGGCTTTTATAGAAATTGTCTGTACCTCGTTG
AAGCTATCCATTTTTGAGCTCCACAGGCCCTGGATGTATGGCTTTAAAAT
AAAGATTCCCTGATGGATATCCCCTTACTCTGCTctagaccccctggata
tccaagcatTCTGTCTAGACTCCCTGGATAAATTTTGCATTATACTCTNg
aaaaatcactaaaattatCTTACTGTACTCTTTCAAGTTCCAACTACAAC
CAGCTGAACTCGAAAAGATACATAAGAGTCTTATGTATCGTTCTATTAAT
GTACAGTATTATGTTTAATTTTGATAGGGTTACCCACACATCTTATGATT
TTTTATGTTTCGCTCACTTTACTGTATATGTCTTTCTTTCATCAGGTTGC
CCGGTACTGTTGATTTCGGCAACATTCAAAGTGGTATTTTGCTGAAAATG
TGGGTGGTTGTGATTTTCTATTTGGTTAAACTGTTACGTTGGAAAGCTGT
GGTATGTATGGTTTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023279XLOC_023279Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038785-exon-sc0001928-1491911889:6633..6666TCONS_00038785-exon-sc0001928-1491911889:6633..6666Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1510915933:6633..6666TCONS_00038785-exon-sc0001928-1510915933:6633..6666Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1575043694:6633..6666TCONS_00038785-exon-sc0001928-1575043694:6633..6666Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1491911889:19804..20321TCONS_00038785-exon-sc0001928-1491911889:19804..20321Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1510915933:19804..20321TCONS_00038785-exon-sc0001928-1510915933:19804..20321Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1575043694:19804..20321TCONS_00038785-exon-sc0001928-1575043694:19804..20321Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1491911889:22029..22192TCONS_00038785-exon-sc0001928-1491911889:22029..22192Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1510915933:22029..22192TCONS_00038785-exon-sc0001928-1510915933:22029..22192Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1575043694:22029..22192TCONS_00038785-exon-sc0001928-1575043694:22029..22192Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1491911889:28728..28850TCONS_00038785-exon-sc0001928-1491911889:28728..28850Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1510915933:28728..28850TCONS_00038785-exon-sc0001928-1510915933:28728..28850Clytia hemisphaericaexon
TCONS_00038785-exon-sc0001928-1575043694:28728..28850TCONS_00038785-exon-sc0001928-1575043694:28728..28850Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001928supercontigsc0001928:6633..28850 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.907778	1.46526	0.000145977	0.243761	0.385569	1.64246	0.778176	0	0.171627	0.637412	0.911233	5.50375e-05	0.321275	0.85263	1.46032e-09	0	0	0.364109	0.14812	0.643219	0.270008	0.111955	2.54437	0	1.02237	1.19238	0	0	1.9469	2.31937
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038785 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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