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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038749 ID=TCONS_00038749|Name=TCONS_00038749|organism=Clytia hemisphaerica|type=transcript|length=955bp
TTTGATTAGTTATATTCTTACGAGGGGGTATTTGTATTTTGCCCGCCAAA
ATGCACACATAAGTGCTGTTAATTGTCCATTTCATTTTGTGAATACGTTT
ATCTTTTGTTCTCTTTAAATATACAAATCATTCAGGTTTAAAATAAAACA
CTACATTTTTGTAATGTTGTCTagtttgttcatttttcatgaACAATAAT
TTGAATCATTTTGTAACAAATTGATCATTAACTTATACtgtttaaataag
aacaaattatagcTAACAACAAAGATAaaatgttcctataaaaaactact
taaaatgttctcactaaTTAAACAACAGTTCATTCCTTCTATTTTCAAAT
GAAAGGTATGAACTTTATTGTTCCCCTTCTCTCAAGGGATAATATGTTCC
TTCCATACAAAGGACAAAGAGTTCTCCGCGGTAAAGTAAAACTGTTCTTT
TACGTATAAGAACACTTTTGATCccgcaaaaaaagaataaaaaggatCAT
TGTTAAAACTAGATCTGTTCAATTCAAATTAAACAATNCCGGTAAAGTAA
AACTGTTCTTTTACGTATAAGAACACTTTTGATCCcgcaaaaaaaagaat
aaaaaggatCATTGTTAAAAATAGATCTGTTCAATTCAAATTAAACAATT
CGTTCTCTGCAACAAGAACAAGAAGGAATTAAATGGAAATCTCCAGGGCA
TGATTTCTCAAACTGTTCAATAAGGAACATAAAAGAGACTCAATTGGTGT
TCCTTCATTGTACATCGCAATGCGATATTAACGAAATTAAAGTAAGAATC
GTCCTGCATAGAAAATTCCCTAGGCACCAAGAAATGAATACAGATTTCCT
AGATAACGACTTTATATATGATAGAAATCCTTTGTTGTAAACATTGTTAC
TTGTTGTGTAATATAGAATTCTATGATATGGAAGAGTATAAAAACATCTA
CATTN Run BLAST on NCBI transcript from alignment at sc0001920:7008..8192+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038749 ID=TCONS_00038749|Name=TCONS_00038749|organism=Clytia hemisphaerica|type=transcript|length=1185bp|location=Sequence derived from alignment at sc0001920:7008..8192+ (Clytia hemisphaerica)
TTTGATTAGTTATATTCTTACGAGGGGGTATTTGTATTTTGCCCGCCAAA
ATGCACACATAAGTGCTATTATTTATCCATTTCATTTGGTGAACACGTTT
ATCTTTTGTTCTCTTTAAATATACAAATCATTCAGATCTAAAATAGaaca
ttatatttttgtaatgTTGTCTGTTTTGTTCATTTTTNAAATAATATACA
AATCATTCAGATCTAAAATAGaacattatatttttgtaatgTTGTCtgtt
ttgttcatttttcatgaACAATCCATTTGAATCNACACATAAGTGCTGTT
AATTGTCCATTTCATTTTGTGAATACGTTTATCTTTTGTTCTCTTTAAAT
ATACAAATCATTCAGGTTTAAAATAAAACACTACATTTTTGTAATGTTGT
CTagtttgttcatttttcatgaACAATAATTTGAATCATTTTGTAACAAA
TTGATCATTAACTTATACtgtttaaataagaacaaattatagcTAACAAC
AAAGATAaaatgttcctataaaaaactacttaaaatgttctcactaaTTA
AACAACAGTTCATTCCTTCTATTTTCAAATGAAAGGTATGAACTTTATTG
TTCCCCTTCTCTCAAGGGATAATATGTTCCTTCCATACAAAGGACAAAGA
GTTCTCCGCGGTAAAGTAAAACTGTTCTTTTACGTATAAGAACACTTTTG
ATCccgcaaaaaaagaataaaaaggatCATTGTTAAAACTAGATCTGTTC
AATTCAAATTAAACAATNCCGGTAAAGTAAAACTGTTCTTTTACGTATAA
GAACACTTTTGATCCcgcaaaaaaaagaataaaaaggatCATTGTTAAAA
ATAGATCTGTTCAATTCAAATTAAACAATTCGTTCTCTGCAACAAGAACA
AGAAGGAATTAAATGGAAATCTCCAGGGCATGATTTCTCAAACTGTTCAA
TAAGGAACATAAAAGAGACTCAATTGGTGTTCCTTCATTGTACATCGCAA
TGCGATATTAACGAAATTAAAGTAAGAATCGTCCTGCATAGAAAATTCCC
TAGGCACCAAGAAATGAATACAGATTTCCTAGATAACGACTTTATATATG
ATAGAAATCCTTTGTTGTAAACATTGTTACTTGTTGTGTAATATAGAATT
CTATGATATGGAAGAGTATAAAAACATCTACATTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038749-exon-sc0001920-1491911889:7008..7065 | TCONS_00038749-exon-sc0001920-1491911889:7008..7065 | Clytia hemisphaerica | exon |
| TCONS_00038749-exon-sc0001920-1510915933:7008..7065 | TCONS_00038749-exon-sc0001920-1510915933:7008..7065 | Clytia hemisphaerica | exon |
| TCONS_00038749-exon-sc0001920-1575043694:7008..7065 | TCONS_00038749-exon-sc0001920-1575043694:7008..7065 | Clytia hemisphaerica | exon |
| TCONS_00038749-exon-sc0001920-1491911889:7296..8192 | TCONS_00038749-exon-sc0001920-1491911889:7296..8192 | Clytia hemisphaerica | exon |
| TCONS_00038749-exon-sc0001920-1510915933:7296..8192 | TCONS_00038749-exon-sc0001920-1510915933:7296..8192 | Clytia hemisphaerica | exon |
| TCONS_00038749-exon-sc0001920-1575043694:7296..8192 | TCONS_00038749-exon-sc0001920-1575043694:7296..8192 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001920 | supercontig | sc0001920:7008..8192 + |
Blast
The following BLAST results are available for this feature:
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