TCONS_00038746 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038746
Unique NameTCONS_00038746
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length83

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038746 ID=TCONS_00038746|Name=TCONS_00038746|organism=Clytia hemisphaerica|type=transcript|length=83bp
tacagaaagaatagaaaaataaaaataagtatcTAGAACAAAATGTCGTA
CAATTTCGTTGGAAAGGTTGTGATTGTCACAGG
Run BLAST on NCBI

transcript from alignment at sc0001919:5670..5752

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038746 ID=TCONS_00038746|Name=TCONS_00038746|organism=Clytia hemisphaerica|type=transcript|length=83bp|location=Sequence derived from alignment at sc0001919:5670..5752 (Clytia hemisphaerica)
CCTGTGACAATCACAACCTTTCCAACGAAATTGTACGACATTTTGTTCTA
gatacttatttttatttttctattctttctgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023256XLOC_023256Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038746-exon-sc0001919-1491911889:5670..5752TCONS_00038746-exon-sc0001919-1491911889:5670..5752Clytia hemisphaericaexon
TCONS_00038746-exon-sc0001919-1510915933:5670..5752TCONS_00038746-exon-sc0001919-1510915933:5670..5752Clytia hemisphaericaexon
TCONS_00038746-exon-sc0001919-1575043694:5670..5752TCONS_00038746-exon-sc0001919-1575043694:5670..5752Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001919supercontigsc0001919:5670..5752 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038746 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top