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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038737 ID=TCONS_00038737|Name=TCONS_00038737|organism=Clytia hemisphaerica|type=transcript|length=635bp
ctACCAAATAGCTCGCAAAATCTAAATCagaaataaacaatttttttctt
cgggtcagtttcaaaaaatttgtcaatttgGACTCGACCTGTGGAGACAA
GATCAAGTTAAATTTTCATCCTAAAAATTCTAATAGATATAAAAATTTAA
CGTATGCAAAAATAACTGCAATGATAGTAATAGAATTATATACTAAATTA
ATAGAAATATTAACGTTAATAAATGGTTTAATTAAACTTGTATATATTAT
TAGTATCAAAAATTATGTGAAAAGAAATAACACAAGTTTCATTTGAAATA
ACAAAGTTTAACAGTCTTAAAACATATAACAATGTCcaaataaattttgt
ttttatattaatCTTGTGTTTTTACTTTTACAGATTGATATAAataaagc
aaaacaaagatttagtgatttaaaaataaattaatgataataaattatga
aaaataatggCCTGGTATCCTTAACATTTCGATTTTTAGTAAATTAATAT
TCAATGTATCtgaattaaagatttttttaagtaGTAAAATTAAACAGAAT
AAACTCCCCGGATAAGCTCAAACGAAGagtcattttaaattttgttattc
aatCTTTTAAGTTTACCAAAtagctagcaaaatca Run BLAST on NCBI transcript from alignment at sc0001919:14710..15944+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038737 ID=TCONS_00038737|Name=TCONS_00038737|organism=Clytia hemisphaerica|type=transcript|length=1235bp|location=Sequence derived from alignment at sc0001919:14710..15944+ (Clytia hemisphaerica)
ctACCAAATAGCTCGCAAAATCTAAATCagaaataaacaatttttttctt
cgggtcagtttcaaaaaatttgtcaatttgGACTCGACCTGTGGAGACAA
GATCAAGTTAAATTTTCATCCTAAAAATTCTAATAGATATAAAAATTTAA
CGTATGCAAAAATAACTGCAATGATAGTAATAGAATTATATACTTAAAAT
AACATACTAAATTAATAGAAATATTAACGTTAATAAATGGTTGAATTAAA
CTTGTATATATTAATAGTATCAAAATTATGTGAAAAGAAATAACACAAGT
TTCATTTGACAATGTCcaaataaattttgtttttataataaTCTTGTGTT
TTTACTTTTACAGATTGATATAACTAAAGCAAACCAAAAATTTAGTGATt
ttagaaataaagaaatgaTAATAAATTAGGAAAAAATAATGGCCTGGCAT
CcttaaaatttcgatttttaataAATTGATATTGAATGAAACTCAATtaa
agattgaatttttttaagtaGTCAACTCAAACAGAATAAGCTCAAAGGAA
GAgtcaattcaaattttgttattcaattttttaagtctATCGAATAGCTT
GCAAAATCTAAATCagaaataaacaaattttttcttcgggtcagtttcaa
aaaaattgtcgatTTGGACACGGCCTGTGGAGACAAGTTCAAGTTAAATT
TTCATCCTAAAAATTCTAATAGATAGAAAAATTTAACGTATCCAAAAATA
ACTGCAATAATAGTAATAGAATTATATACTTAAAATAACATACTAAATTA
ATAGAAATATTAACGTTAATAAATGGTTTAATTAAACTTGTATATATTAT
TAGTATCAAAAATTATGTGAAAAGAAATAACACAAGTTTCATTTGAAATA
ACAAAGTTTAACAGTCTTAAAACATATAACAATGTCcaaataaattttgt
ttttatattaatCTTGTGTTTTTACTTTTACAGATTGATATAAataaagc
aaaacaaagatttagtgatttaaaaataaattaatgataataaattatga
aaaataatggCCTGGTATCCTTAACATTTCGATTTTTAGTAAATTAATAT
TCAATGTATCtgaattaaagatttttttaagtaGTAAAATTAAACAGAAT
AAACTCCCCGGATAAGCTCAAACGAAGagtcattttaaattttgttattc
aatCTTTTAAGTTTACCAAAtagctagcaaaatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038737-exon-sc0001919-1491911889:14710..14898 | TCONS_00038737-exon-sc0001919-1491911889:14710..14898 | Clytia hemisphaerica | exon |
| TCONS_00038737-exon-sc0001919-1510915933:14710..14898 | TCONS_00038737-exon-sc0001919-1510915933:14710..14898 | Clytia hemisphaerica | exon |
| TCONS_00038737-exon-sc0001919-1575043694:14710..14898 | TCONS_00038737-exon-sc0001919-1575043694:14710..14898 | Clytia hemisphaerica | exon |
| TCONS_00038737-exon-sc0001919-1491911889:15499..15944 | TCONS_00038737-exon-sc0001919-1491911889:15499..15944 | Clytia hemisphaerica | exon |
| TCONS_00038737-exon-sc0001919-1510915933:15499..15944 | TCONS_00038737-exon-sc0001919-1510915933:15499..15944 | Clytia hemisphaerica | exon |
| TCONS_00038737-exon-sc0001919-1575043694:15499..15944 | TCONS_00038737-exon-sc0001919-1575043694:15499..15944 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001919 | supercontig | sc0001919:14710..15944 + |
Blast
The following BLAST results are available for this feature:
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