TCONS_00038681 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038681
Unique NameTCONS_00038681
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038681 ID=TCONS_00038681|Name=TCONS_00038681|organism=Clytia hemisphaerica|type=transcript|length=2187bp
CGCTCGAATGATATCTCTTCTTTGCAGTTATTTGgttaaaacttaaaaac
atcAAGCAGTTTAGAGCAAAGTTAACTCTTTCGTATCAAAGCTTCAgtaa
tttgaatattttgtatTTCGCGAGGATGAAAATAAAAGTCAACGGTAGCT
AAAAAGATAATCTTTTATAAATTGCTATCTTTATTTTATCAGCAGGGAAA
AATATAATTAACAGAAATAAAAATTCCCCCgaataataaaaacatttcac
aGCATGTCACCACCGATGTACCGCGATTCATCCTCTGGATATTGGGGATT
CCCCTCCTCCACCATGGATTGGTGTGAAGAAAATTATGCCGTCACGTCAT
ACGTGGCCGAATTCTggaatacAGTCAGCAATGTTGTTTTCGTTGTACCT
CCTTTACTAACCGCTTACCATTTATGGAAACACAAACTCTCTGAACTTGG
CCCCATCGTCTGTTTTCTGTTATTGACAGtcgTTGGTTTTGGATCGTTTG
CTTTCCATTGCACTCTTCTCTATCATTCACAGttACTGGACGAACTACCC
ATGATTTATGGTACATGCGCCATGTTGTACTGCATAATCGAGATTCGATC
ACCGAAAGACAGTGTCAACAAATCGTTGATCGTTATTCTCATTTCAACTT
CTCTCTCTATAACTCTGATATATGGTTCATTGAAGAATCCTCTTATATTT
CTGTGGAGTTATGGCGTGTTGGCTGCCGCCTTGTTTATACTCAACATACG
TGGTTGTCTCTATGGATTTGGTTTCATTCTGTGGAATATCGATAACGAGT
ATTGCTACCGTGTTCGTGATGCACGGAAGAGTTTACCAGGGTTGATAGCT
CCAGTAACTCAACTCCATGCATGGTGGCATTTCTTCGCTGGAGTTGGAAC
CTTCCTCACTATTGTTTATATAATACATTTGCGTTTGACGTGTCTGGGAG
TAAACCCTTTTCTACAGtttttacatGGATTCTTCCCATACTATTCACAA
AAAGTTGGCAGATCATACGAGGAAACCAAATTTCAACAAGACATTAATGG
GAATACCGTGCCGTCCGTCAAACTAAAAAACGGACGTTCGAATAATAGCG
TTGGAAATTTTGCTCGATTACTTTAAAAGTTCTTCTACGATTTTTACGAT
GGTAACATAACTTTAGTTTAGCGCTTCTTATCTTTCACTCGAAGTGTTTT
CGCTGATCCAATCAACTTTAATCCATTTCAAAAATGAACGGGTTTTACTC
AATTGGCTGCAGCCAAAGCAATTTCATATTTGATCAAATCATGGTTCTCA
GTTACAATCAtagtcgtaatatttgagaaaaaagggaaatccaccgggaa
gttttgaaaccacaatcgctttgtaagtgctctaaaagtaggttggaagg
gtagagctTTAACTCTGAgatttaacatgagacttaagacttaagacctt
gcgatctgaggatccaaaagttcaaaaatggtccaataaggctcataata
tagcctggaggtctataaacccgagccaaattgaaatatccgattaaatt
ttAGAGATGgttcaaaatcaactttctcgcccgaactccaaatttcgaaa
aacgaggaaataagctaaattctcaatagatttcgaccatgattgtacat
tGAAAAATGTTCCAATTCCCCACTTTTTGGAGATTGACAATGGAGTTAAA
CTACTATGTGGACATTTTCAAATGGAATAAATTGTGTATTCTTTAATTTT
CGAATTGaaccttctttttttatattactttatttattaacttttatttg
atatatattatttgaaacttttttgtttattttgaaaataaattgtaaAT
ACTATTTTGAACTATTTAGCCAtccatatatttctttttttttaatgtag
cTTTGTGTTCTCTGACCCCAGGGAACCACGTCAATCGTCACAAATTTCAG
CTCGGTGATTTGTGCCTATATGAAGTGTTTATCGGCTTGCCTTTGTCTAG
AATATGTTAGAATATGTTTAAATGAAATCTTTCAATTGTGAATATTATTG
ACTAAATTTGTGGAATATTTTGATTCAGGTTTAAAGGAAACCTTCTGTAA
ATAAATGATCAAACTGAATATTTTTTACGCCATAGGACTATCACGTTTCA
AACTAGAAAGAACATTTAAATTTTCGTGAACAAAATG
Run BLAST on NCBI

transcript from alignment at sc0001909:20145..29618+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038681 ID=TCONS_00038681|Name=TCONS_00038681|organism=Clytia hemisphaerica|type=transcript|length=9474bp|location=Sequence derived from alignment at sc0001909:20145..29618+ (Clytia hemisphaerica)
CGCTCGAATGATATCTCTTCTTTGCAGTTATTTGgttaaaacttaaaaac
atcAAGCAGTTTAGAGCAAAGTTAACTCTTTCGTATCAAAGCTTCAgtaa
tttgaatattttgtatTTCGCGAGGATGAAAATAAAAGTCAACGGTAGCT
AAAAAGATAATCTTTTATAAATTGCTATCTTTATTTTATCAGCAGGGAAA
AATATAATTAACAGAAATAAAAATTCCCCCgaataataaaaacatttcac
aGCATGTCACCACCGATGTACCGCGATTCATCCTCTGGATATTGGGGATT
CCCCTCCTCCACCATGGATTGGTGTGAAGAAAATTATGCCGTCACGTCAT
ACGTGGCCGAATTCTGTAAGTTCATCTTACTATACCTATCTtcctttttc
gaattttccaTTTTCTACTTGATATTTAATTGTTCCTTCCCTGATCGGCC
AGCTTTATCAAATCTAGTTTGAATCAACCCCCAACCCCCCATTTATTAAG
CTTTGAAAACCTCCAATCCATCTTTTCTATACCTGCTAATCTTCACTACC
TTCACTACCTTGTATAGAACGTCAAGAGACTAGACTATTGTGAAACAGTT
AAAATTCTGTTGTAATCTTTAATGGCCGTGAAAATGTATATTAAATTAAA
TACCTCATTCTTTTTCCTAATTTAGGCTCCGTTGGTCGGGCcaaattggg
ccattccatttatatccatacagggactggacgaacatttccagggggta
tttcGAGTAGAATTTCCAAGGTGTCTAAAAGAGTGTCCAATGGCCCAATG
TTATTTTTAAATACTAAtactttttaaatcttttttacagggaatacAGT
CAGCAATGTTGTTTTCGTTGTACCTCCTTTACTAACCGCTTACCATTTAT
GGAAACACAAACTCTCTGAACTTGGCCCCATCGTCTGTTTTCTGTTATTG
ACAGGTAAGAAGGTGGAGTATCTCTTCTCCCTGGTTTGACCAATAGCAGT
AGTTTACATACAACTTACTATATTTTGTTATCCTTATTTTGTTCAAACTT
ATTAAAAGTTCTAGAAGACTCTTGTCCCTAAAAATGAACTTCAGGCATGC
AGAAATTCCACTGATAAAGTTACTATACTTACTAAATTGTATATACTACT
TACTGACTTTAAATTTAAAAGAGTGCTCAATATATACAAACAGAAAATAA
AAGGAAACTTTAAGtattggaaaaaactttcacCTTTTATTTTCTCAGTA
TGATAAAGTCATTACAATATTTCAAACgccttttcagtttttttcttttt
ttcagtcgTTGGTTTTGGATCGTTTGCTTTCCATTGCACTCTTCTCTATC
ATTCACAGGTTAgtgcatagatttataaagtccgaaaggctagatgtcgt
actttaagccatcgcaggcaaaaaaagtgaatatcgcaagaaatataatt
tctattgttttcaaaaatccgCGTAgtatctgattggtcaagcgctgtaA
TGTCatgtgacctaggtaggatttcctaccttaAACCACGACACACTTTT
TAGCAaaagtacgacatctagcccttccaCATCTAGCCAGATTTTTACTC
GTAACATGCTTTGATCTTTTTAAAGATATTGTGTCGGAAAGAAATTACCC
ATGATTTTGGGATTTACCGATTCGAAATTCTCGACCTTATTTATCATGGC
TTCTCTTAAGATGAAATACATAATAGTCAAAAGAGACTATTCTCTGCCAA
TTAATGAGAAAACTTTGAATTATAgtttgtcttatttttttattgccaAC
CTCGATGCGCgatttattacttttttaaacattttaataCCTTAAAAGAT
AAGATTTATATATCTACATTAAACACAGAATATAAGAAAGcctatttaat
aaaaaaatgttacaatgtcgtacaaaaaaaaagacaagCAAGGTATTAAT
AACAGTATGTACACGAAAAGTCTAAGTTTTCAAGGAATTTAGTCATTGCT
GTTTATATCTGTATTTTCAATTGGATGCCTGGAATCATCGTAAACAGGGA
ACATGTATGTTTCCCTCGTCGTGGTTGTCTGTTCGATAACTGTTAAAGTT
GGACAAGATGGTTCTTTTCGTTTGAAATCCATTTCTCTCGTCGCTTGATT
CGGCTTTCTCGTCTTGTTTTGGATGGTCATTCGTTGGCCACAAGCACAAT
TACATTGCCGACGCCTTGAAGTtctctttgtttgttttttgtaagCGTAA
GGTACAAGAACTGGTTCTGTTGTGTAGTAGAAATATAACGGCGGTACTTG
ATTCCACTCTTGTTGTCTAAATGAAGAAGGAAAGTATCTATAAGATTGGT
TCCAACTGGGTGATAAGAAGCGATAGAAAGCGCTAGAAAACGACGAAATG
ACCAAGCTTTAGAGGATAAGAAAAAGGAGTTTGTTATGTTCAATTTTata
cgttttttaataagaacaaactataagaacataaggcttctgTGACCAAA
ATCTTACgaagaagttaagaacattttaaggctttctgggctctaaaaca
cctgttttcttaggaaaatggacaaaaatactgaaaaaatgctgaaaata
agaacatgtcaagaacatttttaggcttgaaatccaaaaagttaagaaca
tgtgaaagcttcaaaattttatGGCAAATGGCATTTAAAATGATCAGAAA
TGATAGATAATCTAGCAACAGATATTTCAGTCGTAAACATTATAAAATGA
AATCTCCTCAACCAAGGGAAAGTAAAACTTTCCTACCTTCTTTTTTCTGC
CTCACATTCCTCACACATTTTTATCAGGTCTTTGATGACCTCTAATTTTT
GGCCTAAGAAAAGGTCTTTCAATGATTCTTTGATCAAGCCCATGTTTTTA
TGTTTCGGTTTGTTGTTCCTCTTGCTTGCTTCACTCGTCACTTTATAGCG
TGTcttgtttgaagtttttcttattttcgggatgatttttttgccctttt
atAGGTCAATTGTCTATTTAAAATTTCCCTCTTGTGTTTTGACATTTCTA
CGAAAAAGCTTTTGTATTTTGTGGCTTGTATTTTCTAATATCTTTAAAAG
ACAGTCTTTTGTTCTTATCGCGTTTGGATTATGATGAATCACACGGCTTA
CGCTAGTGAATAATAGTCTTGAGTTCAGGACTTTCCCTTACTCTTAAATA
TTTCCCAAATATTCTGTGTTGTTGATTCTATTTATTAATTTATATAACTT
AAGAATATTTCTGGCTCTGCTCTGTCGTGCTAATCTTGGAAAAACTAGTc
taaagattattttttttcgatcaAAATTATAGATTACTATTTGTATTTTA
AAAAATACCCTGTCTCGTTACTCCATGCCAAATTTTAACAACCATTTTAT
GTACATGGGAAAAATCTGCTGCCAAATTACCAACGAGCCTAAAGGGACAA
GTACGGAGAATTTTGTGAATGAACATTTTCTTCTCCTTATGCCACATTAA
TAtcttattttcgcgaatcgcgaaatttttttccaagaaaCGTGTTTTGC
GTGTATTAGATTTCGTGATTAGAATTATCTGGAATTTCTGGCgcgtattt
aatttcgcgattcacgAATTCTGAATAAGATTAAATGATGAAAGTAAACG
ATACGAAACTGTTTAGATTTTACTTGACAAACAATGTAATCTATCAGTTA
AAGGGCGCGTAAAAATCTTGAACTAAGGCAAACGTAGAATTGAGTCAGGT
TGAATCGACACTTTTTATGCGAAATTTCACGACTTCAAATCTATCATGGT
TCGCGACATCTCGTATGAAATTCAGTTTATAGATATTCAAAAACTCACGA
TAATTAAACTACTTTATAACAGGTGTCACTTGTCGAATATGATATTCAAC
AGCaattcattttttcttgttttagttACTGGACGAACTACCCATGATTT
ATGGTACATGCGCCATGTTGTACTGCATGTAAgtgttatacccaattttt
acacAGGATTCCCAAAGgagctgaaaaaaattttctgggttGACTCTGAA
ATAGAACAAATTTCGACAGGGGACTTTAGTTGAAGTCTTAACATCATAAG
ATCGAGATTTGAGAAGGTATTATATAAAAGGTCTTTTTCATACTGTTTAA
AATTACCATTATAAAGGGTTACGAGattaaaaatatcagaaaaaagcTTG
AATAAGGGTTAGTAAGAAAATTTCCTCAGTTtgactttttttcctttttt
cgtatttttcaGAATCGAGATTCGATCACCGAAAGACAGTGTCAACAAAT
CGTTGATCGTTATTCTCATTTCAACTTCTCTCTCTATAACTCTGGTAAGT
TCCAGTTCTGTCGTTCGATCGTTCGTTCGCTGGCCTGTTCGTTTCCAGAT
TCCCCACGGACTATTGAGTTCTCCATTGCCGAGTTCctttattgaaatat
taaaaTCCTTCGAATGTTGAATGTTTCCGTTGGCTGGAGAATTTTAAGGG
GGTTACCCTCAACATAAGTACAGtctaaaataaaagatttttgttaTTTC
CTAGGCGTAGAAGTTTGTGGtaacaaaaatatgaaatcttaatttatttt
ttctttaacccACATTCTTTATGCCTCTTTTTACTGCCCACATAAACATC
AGTTTTAAGTTATGGCTCATAAGGTTTACAATTCTTTAaaccaaaacata
attttttgacAATCCTCGGCTTTCTCTCTTTATGCTTTGATGAGCtagtt
ttttttatatgttATAAAGTGCTGAGTATATGTCTTGAGAATTTTTATGC
TTCCTACATTTCATCATTAAGCCAGGCCACGGTGCCCATCATCGAATGAT
AATTGGCCAGTGGGGAATTTCGAAATTACTTTAAAGGTTTTTCTAAATGA
TGAATCGTTTTTCTTACGTTTCCTTTACGTTCGCTGAACATTCAAGTTTT
TAGCTCCACGGTTGTGAACCGAAATTCTAAGTCTATGATTAATATTCTTT
CTTGTTATTTTAGATATATGGTTCATTGAAGAATCCTCTTATATTTCTGG
TAAGTGTTCCCAATTCTTTATGCTTTCTNTTTGAAGAATCCCCTTATATT
TCTGGTAAGTGTTCCCAATTCGTTATGCTTTCTTAAACCGATTCAGTTTT
ATCCTTTCACGGCCGACCCTTCTCTGTTAAAAGTAACAATCTCCTTTATT
TGTTCGCAATTTTCGAAAGCTTGCTTTTACACATGcaagttttttttgaa
gtttaccTAAGTTTTCTTGGAGAATAATCTGAAATTGTTGTGTGTAAAAG
AGCCCTTAAATCAAACAACTCGTGCatccttttcatttttgatgttttct
ttctttgtagTGGAGTTATGGCGTGTTGGCTGCCGCCTTGTTTATACTCA
ACATACGTGGTTGTCTGTAAGTGTTCTTTGTTAAAAGTTCTGTTTTCGAT
GGATTTCCGTTTCAAAATTATGCAtgattcaccaaaatttcaagaattgt
ACTATTTTGCTTTGATCACTGGAGTGATGATTGAAGctctttttttaaaa
cttttttgaacttttttgatACCAAGCCCTTAGaacttttttgaactttt
ttgataccaagcctttagaacttttttagaacttttttgaTACCAAGCCC
TTAgaactttttttaacttttttgatacCAAGCCCTTAGAActgttttga
acttttttgaTACCAAGCCCTTAGAActgttttgaacttttttgaTACCA
AGCCCTTAGAactattttgaacttttttgatACCAAGCCCTTAGaacttt
tttgaacttttttgatACCAAGCCCTTAGAActgttttgaacttttttga
TACCAAGCCCTTAGaacttttttgaacttttttgatACCAAGCCCTTAGA
ActgttttgaacttttttgaTACCAAGCCCTTAGaacttttttgaacttt
tttgatACCAAGCCCTTAGAActgttttgaacttttttgaTACCAAGCCC
TTAGaacttttttgaacttttttgatACCAAGCCCTTAGAACTTTGAAAA
AGGAGCAAACTGGGCATTATAAAACTCTTGAAGTGAGATTTTTTCGTTAA
TAATATTGAAGGCAATTGATTTTGATTCCCCTCTGTATTCGGCAACTTCT
TCAACTTCGTATTTACTTTTCAGAAATTGCAATGGCTCACCAAAACTTTT
AGCTTCAGCATCATTCAAGTAAGTTTCTATCTTGTTAATTACAGAGTGCT
TTATTTGAGAAATGTTATCTAGACATTATAATTTTAGTAAATGGAGAAAc
ttttttctccaaaacttAACGTTTCTTGCTGTTTCAAATTTCTTGCTGTT
TCAAAAATGACAAACTATAGAATGCGTTGGTTTCAATCgacaaaaattga
cttcattttAGTCTTTAGTGTCGAAAAAAGGCGAGGTGTCTATTGATATG
TCGACATTTAATACATcatctaaagtctgtctcgaaataatttgcagctg
gagacaaaaatggctgtaacttttgatagagttcgaatcaagttgcgatt
aagtgcttgttaaaatgatattcgtgagtggaatattatcaagtaaaaaa
attgagaaaaaaaaggaagatgaaaaatgaagaagaaaaaaatcaatttt
ttgtagaaatgtggtataattactattttcacaggagtgattcttcaatc
ttagatcatcatcactgtcaaaaaaattttcaaaaatattcattcaatca
aaagatatcaaagaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAaagaaagtt
tattgctggttgactctataaaatagtaaaaactggtaaaaaacgacaaa
aaaacagccttttgtcgatcaaccagcaataaactttgcaTCATCAGTCA
TTTCGTCCTACACCGTTTATGTCGAGTGTATGGTATACACTATATATAAA
AAGAATGTTTATCGATAAAGCTGTGTTGGTCACCTAGTAACCCCTTTTTC
TGGAATTTTCATTCTAGCTATGGATTTGGTTTCATTCTGTGGAATATCGA
TAACGAGTATTGCTACCGTGTTCGGTAAGTTGAGTTTTGTTCCTTTTTGA
TCCCTTCCTCTCATTTCAATCATGCGACTAAGGGAAGAGTTGGCTTGACA
TATTATGTTAATTGGGTAAAAAATGGATGGTGATGGATTCCCTTTGTACA
AGCTCGATAAAGAGACGATAAAGTTGTTaaatgttatgcttataaaaaca
ggAATCAACGACATTCAATCATTTATGTTTTTTGAGTAGTTGCGAATTTC
CTTTGTTCAAGATCAGTATTCGATAAAGATTCTATTGTTCTTAGATGATA
AAGTCACGTTACGTTACGTgtgatgcttataaaaacatgtacaaCATCAA
CCACATCTTTTGCTAAATACTGCACCTTCAATCCCTGTGGCACGGCCACT
TTATCTTCTTCATCCCTCTTTTATAGTGATGCACGGAAGAGTTTACCAGG
GTTGATAGCTCCAGTAACTCAACTCCATGCATGGTGGCATTTCTTCGCTG
GAGTTGGAACCTTCCTCACTATTGTTTATATGTAAGTATGATGCTGTTAA
GTACAAATATTCTTCattgaattttcattaaaaatcaaaagtaaataGCC
AACAGGATGCTGATAAATCCAAGCTTTCATTATTCtcgaattttcgaatt
tttattgaaaatcaaaagtaaTAAACAACAGGTACTGGTAGATATAGATA
TCCACTTCCCTACCGTTGTCTTTCTAAACTTCTAGGAGTTTTAAGAAagt
atgttttttttaattctgctCTAATTTGTTTTCAGAATACATTTGCGTTT
GACGTGTCTGGGAGTAAACCCTTTTCTACAGGTAAGTTATGAATAGAATt
aacgattttcaaaaaaggcttttttgatgtattattagctttttggcttt
ttttgataagaattaaaatatagaaatatgTCTATAACTGCCTATAATGC
GTCTAACTCGGAATTTTGAATAACGTATCAAttcgaaaaatgaaatataa
aagTTCTTTTCGAGTTACATAACTCGAACAGCCTATGCGCGAAGGCCAAA
AGTAGTGTTGCCTTGTTTTTTGGTTtagaaaacttctttttttttttttt
ttagtttttacatGGATTCTTCCCATACTATTCACAAAAAGTTGGCAGAT
CATACGAGGAAACCAAATTTCAACAAGACATTAATGGGAATACCGTGCCG
TCCGTCAAACTAAAAAACGGACGTTCGAATAATAGCGTTGGAAATTTTGC
TCGATTACTTTAAAAGTTCTTCTACGATTTTTACGATGGTAACATAACTT
TAGTTTAGCGCTTCTTATCTTTCACTCGAAGTGTTTTCGCTGATCCAATC
AACTTTAATCCATTTCAAAAATGAACGGGTTTTACTCAATTGGCTGCAGC
CAAAGCAATTTCATATTTGATCAAATCATGGTTCTCAGTTACAATCAtag
tcgtaatatttgagaaaaaagggaaatccaccgggaagttttgaaaccac
aatcgctttgtaagtgctctaaaagtaggttggaagggtagagctTTAAC
TCTGAgatttaacatgagacttaagacttaagaccttgcgatctgaggat
ccaaaagttcaaaaatggtccaataaggctcataatatagcctggaggtc
tataaacccgagccaaattgaaatatccgattaaattttAGAGATGgttc
aaaatcaactttctcgcccgaactccaaatttcgaaaaacgaggaaataa
gctaaattctcaatagatttcgaccatgattgtacattGAAAAATGTTCC
AATTCCCCACTTTTTGGAGATTGACAATGGAGTTAAACTACTATGTGGAC
ATTTTCAAATGGAATAAATTGTGTATTCTTTAATTTTCGAATTGaacctt
ctttttttatattactttatttattaacttttatttgatatatattattt
gaaacttttttgtttattttgaaaataaattgtaaATACTATTTTGAACT
ATTTAGCCAtccatatatttctttttttttaatgtagcTTTGTGTTCTCT
GACCCCAGGGAACCACGTCAATCGTCACAAATTTCAGCTCGGTGATTTGT
GCCTATATGAAGTGTTTATCGGCTTGCCTTTGTCTAGAATATGTTAGAAT
ATGTTTAAATGAAATCTTTCAATTGTGAATATTATTGACTAAATTTGTGG
AATATTTTGATTCAGGTTTAAAGGAAACCTTCTGTAAATAAATGATCAAA
CTGAATATTTTTTACGCCATAGGACTATCACGTTTCAAACTAGAAAGAAC
ATTTAAATTTTCGTGAACAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023219XLOC_023219Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038681-exon-sc0001909-1491911889:20145..20509TCONS_00038681-exon-sc0001909-1491911889:20145..20509Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:20145..20509TCONS_00038681-exon-sc0001909-1510915933:20145..20509Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:20145..20509TCONS_00038681-exon-sc0001909-1575043694:20145..20509Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:20985..21098TCONS_00038681-exon-sc0001909-1491911889:20985..21098Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:20985..21098TCONS_00038681-exon-sc0001909-1510915933:20985..21098Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:20985..21098TCONS_00038681-exon-sc0001909-1575043694:20985..21098Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:21450..21502TCONS_00038681-exon-sc0001909-1491911889:21450..21502Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:21450..21502TCONS_00038681-exon-sc0001909-1510915933:21450..21502Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:21450..21502TCONS_00038681-exon-sc0001909-1575043694:21450..21502Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:24070..24122TCONS_00038681-exon-sc0001909-1491911889:24070..24122Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:24070..24122TCONS_00038681-exon-sc0001909-1510915933:24070..24122Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:24070..24122TCONS_00038681-exon-sc0001909-1575043694:24070..24122Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:24407..24488TCONS_00038681-exon-sc0001909-1491911889:24407..24488Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:24407..24488TCONS_00038681-exon-sc0001909-1510915933:24407..24488Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:24407..24488TCONS_00038681-exon-sc0001909-1575043694:24407..24488Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:25158..25193TCONS_00038681-exon-sc0001909-1491911889:25158..25193Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:25158..25193TCONS_00038681-exon-sc0001909-1510915933:25158..25193Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:25158..25193TCONS_00038681-exon-sc0001909-1575043694:25158..25193Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:25505..25560TCONS_00038681-exon-sc0001909-1491911889:25505..25560Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:25505..25560TCONS_00038681-exon-sc0001909-1510915933:25505..25560Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:25505..25560TCONS_00038681-exon-sc0001909-1575043694:25505..25560Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:27262..27318TCONS_00038681-exon-sc0001909-1491911889:27262..27318Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:27262..27318TCONS_00038681-exon-sc0001909-1510915933:27262..27318Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:27262..27318TCONS_00038681-exon-sc0001909-1575043694:27262..27318Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:27721..27825TCONS_00038681-exon-sc0001909-1491911889:27721..27825Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:27721..27825TCONS_00038681-exon-sc0001909-1510915933:27721..27825Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:27721..27825TCONS_00038681-exon-sc0001909-1575043694:27721..27825Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:28080..28125TCONS_00038681-exon-sc0001909-1491911889:28080..28125Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:28080..28125TCONS_00038681-exon-sc0001909-1510915933:28080..28125Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:28080..28125TCONS_00038681-exon-sc0001909-1575043694:28080..28125Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1491911889:28399..29618TCONS_00038681-exon-sc0001909-1491911889:28399..29618Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1510915933:28399..29618TCONS_00038681-exon-sc0001909-1510915933:28399..29618Clytia hemisphaericaexon
TCONS_00038681-exon-sc0001909-1575043694:28399..29618TCONS_00038681-exon-sc0001909-1575043694:28399..29618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001909supercontigsc0001909:20145..29618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.69278	1.16569	0	0.694757	2.64717	2.36745	1.34814	2.48166	0.828619	1.20842	0.581967	0.177956	0.473819	0.167829	0.692268	0	0.186895	0	0	0.722517	1.03658	3.97168	0.548216	0.604587	0.282349	0.260855	1.008	0	0.211508	0.222473
Blast
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BLAST of TCONS_00038681 vs. Swiss-Prot (Human)
Match: ACER3 (Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 1.368e-53
Identity = 112/261 (42.91%), Postives = 154/261 (59.00%), Query Frame = 2 
Query:  254 MSPPMYRDSSSGYWGFPSSTMDWCEENYAVTSYVAEFWNTVSNVVFVVPPLLTAYHLWKHKLSELGPIVCFLLLTVVGFGSFAFHCTLLYHSQLLDELPMIYGTCAMLYCIIEIRSPKDSVNKXXXXXXXXXXXXXXXXXXXXKNPLIFLWSYGVLAAALFILNI----------RGCLYG------FGFILWNIDNEYCYRVRDARKSLPGLIAPVTQLHAWWHFFAGVGTFLTIVYIIHLRLTCLGVNPFLQFLHGFFP 988
            M+P   R+   GYWG  +ST+DWCEENY+VT Y+AEFWNTVSN++ ++PP+  A    +  L E   I  +L LTVVG GS+ FH TL Y  QLLDELPMIY  C  +YC+ E    K+SVN  L+  L+  SL +T +Y  +K P+     YG+L   L + +I          RG  Y        GF+ WNIDN +C  +R+ RK +P +I   TQ HAWWH   G+G++L I++ ++ R   L   P ++FL G +P
Sbjct:    1 MAPAADRE---GYWGPTTSTLDWCEENYSVTWYIAEFWNTVSNLIMIIPPMFGAVQSVRDGL-EKRYIASYLALTVVGMGSWCFHMTLKYEMQLLDELPMIYSCCIFVYCMFECFKIKNSVNYHLLFTLVLFSLIVTTVYLKVKEPIFHQVMYGMLVFTLVLRSIYIVTWVYPWLRGLGYTSLGIFLLGFLFWNIDNIFCESLRNFRKKVPPIIGITTQFHAWWHILTGLGSYLHILFSLYTRTLYLRYRPKVKFLFGIWP 257
The following BLAST results are available for this feature:
BLAST of TCONS_00038681 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACER31.368e-5342.91Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=... [more]
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