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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038611 ID=TCONS_00038611|Name=TCONS_00038611|organism=Clytia hemisphaerica|type=transcript|length=1084bp
ACCCCCTATCGGCCAaagggattaacaaataacaagtgtgtaacttgccg
cgtgagtgacgtcaaacgcttcATCTTTTTGCCACTAATAttgtcttctt
cgttccagacatttgcACGTGTTCTACTACAGTTTTTTTtccatatttcg
atttaaaagcctactcggtgtgaAAGAGaatatcgtgcattttttaaaac
tcaaatcaaatgactttggaggttcggtaaaatggtggcccaattgccgt
cccatgttttgtcagatagtcccaagcaAGAGCAGTTGACGATAACTGCT
ACTAAGAGGAGTTGGCAAGTGAACGCTCCTTCGCCTgagtcaacccatgc
catgtgaggggaattgggtagtcagttcaggGTGCTGACGGgccgctcat
tagtaagcgtctatagttgcgagaatacgcctctaaagcctcctgcaact
caaccaaatagagaATATAGATTGGACGGGTTTTTGTTTGTAGACCAAGG
tagttcgagccggggtcggatACCTTTTTCATAACAAACAAGTTATGTAA
CAAACTTGCAAAGTTCTTAGCTTCTCAAAGTATCAATGAATTAAAACAGT
TTGTAATTAACCTGTTAAACTAAAATcatattttgaaatcaaaaacctTA
CATTTTCATGGTTCCTTTTGGTCCAAGATTAGTCTTTAAAACTTCCTGTA
AACCTTTAGCAGCACTAATGTTTAACTGAAGAGCTTGTGAAGCACGAGCT
ACTTCAGCTTTTGGATTGATTAATTTGACAGCAGACATTTTGATTCAAGA
AAAGTGCAAATTTCGTTGATGATGGACTGCCCAAAGCTATTCTTCTCAGC
TCAAAATTCGAATCCCGCCTGTCGATGTTCTGGAAACATCGATTTTGCAC
GCGGTAAATTGCTGACATAGCAAAAAATAGAAACAAAGGTTAAAATACTG
ACCAGATGATATAATAAATTTAGACAGACTCTTAGCAAAAAGTGAGATCG
CTTATTAGAGCCAGAGTCATAATGACGGTCCTGGGAATCTTTTGATAAAT
GGTGATGAGCAGCCGTGCCGAATTATTCTTTTTG Run BLAST on NCBI transcript from alignment at sc0001892:20429..21512 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038611 ID=TCONS_00038611|Name=TCONS_00038611|organism=Clytia hemisphaerica|type=transcript|length=1084bp|location=Sequence derived from alignment at sc0001892:20429..21512 (Clytia hemisphaerica)
CAAAAAGAATAATTCGGCACGGCTGCTCATCACCATTTATCAAAAGATTC
CCAGGACCGTCATTATGACTCTGGCTCTAATAAGCGATCTCACTTTTTGC
TAAGAGTCTGTCTAAATTTATTATATCATCTGGTCAGTATTTTAACCTTT
GTTTCTATTTTTTGCTATGTCAGCAATTTACCGCGTGCAAAATCGATGTT
TCCAGAACATCGACAGGCGGGATTCGAATTTTGAGCTGAGAAGAATAGCT
TTGGGCAGTCCATCATCAACGAAATTTGCACTTTTCTTGAATCAAAATGT
CTGCTGTCAAATTAATCAATCCAAAAGCTGAAGTAGCTCGTGCTTCACAA
GCTCTTCAGTTAAACATTAGTGCTGCTAAAGGTTTACAGGAAGTTTTAAA
GACTAATCTTGGACCAAAAGGAACCATGAAAATGTAaggtttttgatttc
aaaatatgATTTTAGTTTAACAGGTTAATTACAAACTGTTTTAATTCATT
GATACTTTGAGAAGCTAAGAACTTTGCAAGTTTGTTACATAACTTGTTTG
TTATGAAAAAGGTatccgaccccggctcgaactaCCTTGGTCTACAAACA
AAAACCCGTCCAATCTATATtctctatttggttgagttgcaggaggcttt
agaggcgtattctcgcaactatagacgcttactaatgagcggcCCGTCAG
CACcctgaactgactacccaattcccctcacatggcatgggttgactcAG
GCGAAGGAGCGTTCACTTGCCAACTCCTCTTAGTAGCAGTTATCGTCAAC
TGCTCTtgcttgggactatctgacaaaacatgggacggcaattgggccac
cattttaccgaacctccaaagtcatttgatttgagttttaaaaaatgcac
gatattCTCTTtcacaccgagtaggcttttaaatcgaaatatggaAAAAA
AACTGTAGTAGAACACGTgcaaatgtctggaacgaagaagacaaTATTAG
TGGCAAAAAGATgaagcgtttgacgtcactcacgcggcaagttacacact
tgttatttgttaatcccttTGGCCGATAGGGGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038611-exon-sc0001892-1491911889:20429..21512 | TCONS_00038611-exon-sc0001892-1491911889:20429..21512 | Clytia hemisphaerica | exon |
| TCONS_00038611-exon-sc0001892-1510915933:20429..21512 | TCONS_00038611-exon-sc0001892-1510915933:20429..21512 | Clytia hemisphaerica | exon |
| TCONS_00038611-exon-sc0001892-1575043694:20429..21512 | TCONS_00038611-exon-sc0001892-1575043694:20429..21512 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001892 | supercontig | sc0001892:20429..21512 . |
Blast
The following BLAST results are available for this feature:
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