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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038602 ID=TCONS_00038602|Name=TCONS_00038602|organism=Clytia hemisphaerica|type=transcript|length=893bp
TGATGACTCAGCCGCCGTAGACGAGGTTGTTGTACTAATGTTGTGGTCCA
TTTGATGTCGCCTTTGAACACGGCCACCATTTTGCCATTGCCTGAAACAC
CTTCTTACACTTCCGTTCATGAAAATGTAAACGATAGAGTTGCTAAGACC
GTCCAAGTAAAACCAGAATAGAGAATATAAAAAACCATTAGCCAAACCTC
TTAGCAGATGGGGAAGTGTCCCAAATATGAAGAAAGATAGACAGATGACA
AAGGGTGTGAAAATCTTTGCTTTGCGGTTTTTGTACATCGTATTTTTAGT
GGTTCGATTGGCTTTCCGATACTTGATGTAAATGTAAGAATACACAACCA
AAAAAATGACGTTGGTGACGAAGAGGCCGAAACCAGAGTTACCAATAGTA
ATGTAGACCATGACGTCATAAGAAATGAGCTTCATCCAGTATCCAGTTAT
TGTCGTGCCCAAAAATATACCACATATAACCCATGATGCAACAACCATGT
GAGTTCGTTTGAGGAAAACCCAAGATGATTCATAGCGTAAATGCAACCAA
ATGGCAAAGAATCTTTGTAATGTTAATAAGATCATTGCGCTGTACATAGG
GATGAGGAAACACGTCGAAAGaccgaaaaaaaacattgagtATTTGGGAT
AGTAGAGAGCTGTAACAATTCGAGGTATAGATACTAAACTGAGTACAATA
AATGAAATCGATAAACTGATCACCTCAacattttctttcctttttgagTT
CGATTTAAATATAAACCATACACCCAAGCAGTGTATAAGAACAACAATGC
AAGCCAGTGATAGACAAATCAGAGCGAAAGTTTCCCAACTACCCATCACA
TTAACTTTGACAATCGAATACTGTTGAAGTTGTTTGTAGTTTT Run BLAST on NCBI protein sequence of TCONS_00038602-protein >TCONS_00038602-protein ID=TCONS_00038602-protein|Name=TCONS_00038602-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
NYKQLQQYSIVKVNVMGSWETFALICLSLACIVVLIHCLGVWFIFKSNSK
RKENVEVISLSISFIVLSLVSIPRIVTALYYPKYSMFFFGLSTCFLIPMY
SAMILLTLQRFFAIWLHLRYESSWVFLKRTHMVVASWVICGIFLGTTITG
YWMKLISYDVMVYITIGNSGFGLFVTNVIFLVVYSYIYIKYRKANRTTKN
TMYKNRKAKIFTPFVICLSFFIFGTLPHLLRGLANGFLYSLFWFYLDGLS
NSIVYIFMNGSVRRCFRQWQNGGRVQRRHQMDHNISTTTSSTAAESS Run BLAST on NCBI transcript from alignment at sc0001891:9783..10675 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038602 ID=TCONS_00038602|Name=TCONS_00038602|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at sc0001891:9783..10675 (Clytia hemisphaerica)
AAAACTACAAACAACTTCAACAGTATTCGATTGTCAAAGTTAATGTGATG
GGTAGTTGGGAAACTTTCGCTCTGATTTGTCTATCACTGGCTTGCATTGT
TGTTCTTATACACTGCTTGGGTGTATGGTTTATATTTAAATCGAActcaa
aaaggaaagaaaatgtTGAGGTGATCAGTTTATCGATTTCATTTATTGTA
CTCAGTTTAGTATCTATACCTCGAATTGTTACAGCTCTCTACTATCCCAA
ATactcaatgttttttttcggtCTTTCGACGTGTTTCCTCATCCCTATGT
ACAGCGCAATGATCTTATTAACATTACAAAGATTCTTTGCCATTTGGTTG
CATTTACGCTATGAATCATCTTGGGTTTTCCTCAAACGAACTCACATGGT
TGTTGCATCATGGGTTATATGTGGTATATTTTTGGGCACGACAATAACTG
GATACTGGATGAAGCTCATTTCTTATGACGTCATGGTCTACATTACTATT
GGTAACTCTGGTTTCGGCCTCTTCGTCACCAACGTCATTTTTTTGGTTGT
GTATTCTTACATTTACATCAAGTATCGGAAAGCCAATCGAACCACTAAAA
ATACGATGTACAAAAACCGCAAAGCAAAGATTTTCACACCCTTTGTCATC
TGTCTATCTTTCTTCATATTTGGGACACTTCCCCATCTGCTAAGAGGTTT
GGCTAATGGTTTTTTATATTCTCTATTCTGGTTTTACTTGGACGGTCTTA
GCAACTCTATCGTTTACATTTTCATGAACGGAAGTGTAAGAAGGTGTTTC
AGGCAATGGCAAAATGGTGGCCGTGTTCAAAGGCGACATCAAATGGACCA
CAACATTAGTACAACAACCTCGTCTACGGCGGCTGAGTCATCA Coding sequence (CDS) from alignment at sc0001891:9783..10675 >TCONS_00038602 ID=TCONS_00038602|Name=TCONS_00038602|organism=Clytia hemisphaerica|type=CDS|length=891bp|location=Sequence derived from alignment at sc0001891:9783..10675 (Clytia hemisphaerica)
AACTACAAACAACTTCAACAGTATTCGATTGTCAAAGTTAATGTGATGGG
TAGTTGGGAAACTTTCGCTCTGATTTGTCTATCACTGGCTTGCATTGTTG
TTCTTATACACTGCTTGGGTGTATGGTTTATATTTAAATCGAActcaaaa
aggaaagaaaatgtTGAGGTGATCAGTTTATCGATTTCATTTATTGTACT
CAGTTTAGTATCTATACCTCGAATTGTTACAGCTCTCTACTATCCCAAAT
actcaatgttttttttcggtCTTTCGACGTGTTTCCTCATCCCTATGTAC
AGCGCAATGATCTTATTAACATTACAAAGATTCTTTGCCATTTGGTTGCA
TTTACGCTATGAATCATCTTGGGTTTTCCTCAAACGAACTCACATGGTTG
TTGCATCATGGGTTATATGTGGTATATTTTTGGGCACGACAATAACTGGA
TACTGGATGAAGCTCATTTCTTATGACGTCATGGTCTACATTACTATTGG
TAACTCTGGTTTCGGCCTCTTCGTCACCAACGTCATTTTTTTGGTTGTGT
ATTCTTACATTTACATCAAGTATCGGAAAGCCAATCGAACCACTAAAAAT
ACGATGTACAAAAACCGCAAAGCAAAGATTTTCACACCCTTTGTCATCTG
TCTATCTTTCTTCATATTTGGGACACTTCCCCATCTGCTAAGAGGTTTGG
CTAATGGTTTTTTATATTCTCTATTCTGGTTTTACTTGGACGGTCTTAGC
AACTCTATCGTTTACATTTTCATGAACGGAAGTGTAAGAAGGTGTTTCAG
GCAATGGCAAAATGGTGGCCGTGTTCAAAGGCGACATCAAATGGACCACA
ACATTAGTACAACAACCTCGTCTACGGCGGCTGAGTCATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038602-exon-sc0001891-1491911889:9783..10675 | TCONS_00038602-exon-sc0001891-1491911889:9783..10675 | Clytia hemisphaerica | exon |
| TCONS_00038602-exon-sc0001891-1510915933:9783..10675 | TCONS_00038602-exon-sc0001891-1510915933:9783..10675 | Clytia hemisphaerica | exon |
| TCONS_00038602-exon-sc0001891-1575043694:9783..10675 | TCONS_00038602-exon-sc0001891-1575043694:9783..10675 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001891 | supercontig | sc0001891:9783..10675 . |
Blast
The following BLAST results are available for this feature:
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