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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038598 ID=TCONS_00038598|Name=TCONS_00038598|organism=Clytia hemisphaerica|type=transcript|length=859bp
AATATTTAGTTTGAAGATGAAATTCAACGAGACACGCAACCAGACACAAT
TTAACTACGATTCCTTTTCCTGGGATTATGTGTCCGTCGTTTGCATTGCT
TTAGCAATATTGACCATCCTTCTGCACTGTTTTGGAATATGGTTATTAgt
gaaaacaaaacacaaaattaaAGAACATATTGAAATCATAAGTTTATCCT
tcaatttgatttgttttggtgtttcCGCAATTGTACACGTGACCCTACTG
ATCGAGTTACCCAACTACGAAAATGTAGCCGCGATTTGCATGCACGCTAA
TCTTATTCCCTTTTATGCTGGAATGATTTTATTGACATTACAAAGATTCT
TTGCTATTTGGTTGCATTTACGCTATGAATCATCTTGGGTTTTCCTCAAA
AGAACTCACATGGTTGTCGTGTCTTGGCTAGTCGGTGGTTTGATTCTAGT
CCTACATATGTTATATGCGAGTGGAGTAATCAAGTCTGTTGCTTGGTTAT
TCTATTTGGTCTCTGTGTTACCTCAAATAGGATTTTTCTCGACTATCATT
ATATTTGCATTCACCTACACGTACATATACACCAAATATCGTCAATCGAC
ACAAACAACAAGAAACTCGATGTacaaaaacagaaaatcaaAACTGTTTA
CTCCTGTTTTCATATGTGGCTCGTTTTTCTTGTTTGGAACGGTCCCTCAT
TTTGTGGATCCATTCCATAGAGAAAAGTATTTATTCTATGTTTGGTTCCT
ACTGGACGGTATTAGTAACTTCTTCGTCTATATTTTCATGAAtaagaaaa
tcatgaaattttgtaAGAAATTGTTTGGAAGACGAAAGAGAAACACCCTT
CACGCTTCA Run BLAST on NCBI protein sequence of TCONS_00038598-protein >TCONS_00038598-protein ID=TCONS_00038598-protein|Name=TCONS_00038598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
IFSLKMKFNETRNQTQFNYDSFSWDYVSVVCIALAILTILLHCFGIWLLV
KTKHKIKEHIEIISLSFNLICFGVSAIVHVTLLIELPNYENVAAICMHAN
LIPFYAGMILLTLQRFFAIWLHLRYESSWVFLKRTHMVVVSWLVGGLILV
LHMLYASGVIKSVAWLFYLVSVLPQIGFFSTIIIFAFTYTYIYTKYRQST
QTTRNSMYKNRKSKLFTPVFICGSFFLFGTVPHFVDPFHREKYLFYVWFL
LDGISNFFVYIFMNKKIMKFCKKLFGRRKRNTLHAS Run BLAST on NCBI transcript from alignment at sc0001891:12081..12939+ Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038598 ID=TCONS_00038598|Name=TCONS_00038598|organism=Clytia hemisphaerica|type=transcript|length=859bp|location=Sequence derived from alignment at sc0001891:12081..12939+ (Clytia hemisphaerica)
AATATTTAGTTTGAAGATGAAATTCAACGAGACACGCAACCAGACACAAT
TTAACTACGATTCCTTTTCCTGGGATTATGTGTCCGTCGTTTGCATTGCT
TTAGCAATATTGACCATCCTTCTGCACTGTTTTGGAATATGGTTATTAgt
gaaaacaaaacacaaaattaaAGAACATATTGAAATCATAAGTTTATCCT
tcaatttgatttgttttggtgtttcCGCAATTGTACACGTGACCCTACTG
ATCGAGTTACCCAACTACGAAAATGTAGCCGCGATTTGCATGCACGCTAA
TCTTATTCCCTTTTATGCTGGAATGATTTTATTGACATTACAAAGATTCT
TTGCTATTTGGTTGCATTTACGCTATGAATCATCTTGGGTTTTCCTCAAA
AGAACTCACATGGTTGTCGTGTCTTGGCTAGTCGGTGGTTTGATTCTAGT
CCTACATATGTTATATGCGAGTGGAGTAATCAAGTCTGTTGCTTGGTTAT
TCTATTTGGTCTCTGTGTTACCTCAAATAGGATTTTTCTCGACTATCATT
ATATTTGCATTCACCTACACGTACATATACACCAAATATCGTCAATCGAC
ACAAACAACAAGAAACTCGATGTacaaaaacagaaaatcaaAACTGTTTA
CTCCTGTTTTCATATGTGGCTCGTTTTTCTTGTTTGGAACGGTCCCTCAT
TTTGTGGATCCATTCCATAGAGAAAAGTATTTATTCTATGTTTGGTTCCT
ACTGGACGGTATTAGTAACTTCTTCGTCTATATTTTCATGAAtaagaaaa
tcatgaaattttgtaAGAAATTGTTTGGAAGACGAAAGAGAAACACCCTT
CACGCTTCA Coding sequence (CDS) from alignment at sc0001891:12081..12939+ >TCONS_00038598 ID=TCONS_00038598|Name=TCONS_00038598|organism=Clytia hemisphaerica|type=CDS|length=858bp|location=Sequence derived from alignment at sc0001891:12081..12939+ (Clytia hemisphaerica)
ATATTTAGTTTGAAGATGAAATTCAACGAGACACGCAACCAGACACAATT
TAACTACGATTCCTTTTCCTGGGATTATGTGTCCGTCGTTTGCATTGCTT
TAGCAATATTGACCATCCTTCTGCACTGTTTTGGAATATGGTTATTAgtg
aaaacaaaacacaaaattaaAGAACATATTGAAATCATAAGTTTATCCTt
caatttgatttgttttggtgtttcCGCAATTGTACACGTGACCCTACTGA
TCGAGTTACCCAACTACGAAAATGTAGCCGCGATTTGCATGCACGCTAAT
CTTATTCCCTTTTATGCTGGAATGATTTTATTGACATTACAAAGATTCTT
TGCTATTTGGTTGCATTTACGCTATGAATCATCTTGGGTTTTCCTCAAAA
GAACTCACATGGTTGTCGTGTCTTGGCTAGTCGGTGGTTTGATTCTAGTC
CTACATATGTTATATGCGAGTGGAGTAATCAAGTCTGTTGCTTGGTTATT
CTATTTGGTCTCTGTGTTACCTCAAATAGGATTTTTCTCGACTATCATTA
TATTTGCATTCACCTACACGTACATATACACCAAATATCGTCAATCGACA
CAAACAACAAGAAACTCGATGTacaaaaacagaaaatcaaAACTGTTTAC
TCCTGTTTTCATATGTGGCTCGTTTTTCTTGTTTGGAACGGTCCCTCATT
TTGTGGATCCATTCCATAGAGAAAAGTATTTATTCTATGTTTGGTTCCTA
CTGGACGGTATTAGTAACTTCTTCGTCTATATTTTCATGAAtaagaaaat
catgaaattttgtaAGAAATTGTTTGGAAGACGAAAGAGAAACACCCTTC
ACGCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038598-exon-sc0001891-1491911889:12081..12939 | TCONS_00038598-exon-sc0001891-1491911889:12081..12939 | Clytia hemisphaerica | exon |
| TCONS_00038598-exon-sc0001891-1510915933:12081..12939 | TCONS_00038598-exon-sc0001891-1510915933:12081..12939 | Clytia hemisphaerica | exon |
| TCONS_00038598-exon-sc0001891-1575043694:12081..12939 | TCONS_00038598-exon-sc0001891-1575043694:12081..12939 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001891 | supercontig | sc0001891:12081..12939 + |
Blast
The following BLAST results are available for this feature:
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