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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038590 ID=TCONS_00038590|Name=TCONS_00038590|organism=Clytia hemisphaerica|type=transcript|length=743bp
ATTCTCTTGTGAGAAAGTCTTTGGTACTAAGAAAGTagaagaaaaaacta
ataaattaaTGAATATTCTCCAAGAAATTGATAAGCATATCCCATTTAAG
AACATACCAAACAAAAACCAGGGAATGTCCATGGAATGCAGAAAATTaat
caaagaaagaagaagTACCATCAACCTgctaagaaaatacaaaaacaaca
actttCTCAGAAACAGGAAAACAGAATTAAACAggcaaatcaaaaatgaa
atccaaaagAGCAACGATAAGagatttaatttaattaaaaagagGATGAA
TGAAAGGGAAACAACCAAAAAGACATGGAGTTATATCAAAACCATTTTAG
ACGGTGAGAAAGTAAACACCCAACACAAAGAACAAACTTTCACTAAAGAC
GACGgttccaaaattaaaaacaagcaAGATATTGCAGATGCCTTTAAGGA
AAGAcaagaaaatatctttaaacCCAATCTATCAAATGATAGAAGACATA
AGTACGTTGTAGACCACTGGTTCGAAAACACCCAATTCCACAGAAGAGAA
CGACATTCAATTTACCACATGCTAGACCCATTATTAACCAGGCACGAAAT
AGATGAACAAATAACAGATCAAGAAGTAGCTAATGTTCTTAAAAGCCTCA
AAACCCACAAAGCACCAGGTCATGATGCCATACAAAATAAACTTCTTTCC
ACACTTTCTCCTATTCTTATATCACCACTATCTTCTCTTTTTA Run BLAST on NCBI protein sequence of TCONS_00038590-protein >TCONS_00038590-protein ID=TCONS_00038590-protein|Name=TCONS_00038590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
FSCEKVFGTKKVEEKTNKLMNILQEIDKHIPFKNIPNKNQGMSMECRKLI
KERRSTINLLRKYKNNNFLRNRKTELNRQIKNEIQKSNDKRFNLIKKRMN
ERETTKKTWSYIKTILDGEKVNTQHKEQTFTKDDGSKIKNKQDIADAFKE
RQENIFKPNLSNDRRHKYVVDHWFENTQFHRRERHSIYHMLDPLLTRHEI
DEQITDQEVANVLKSLKTHKAPGHDAIQNKLLSTLSPILISPLSSLF Run BLAST on NCBI transcript from alignment at sc0001889:29757..30499 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038590 ID=TCONS_00038590|Name=TCONS_00038590|organism=Clytia hemisphaerica|type=transcript|length=743bp|location=Sequence derived from alignment at sc0001889:29757..30499 (Clytia hemisphaerica)
TAAAAAGAGAAGATAGTGGTGATATAAGAATAGGAGAAAGTGTGGAAAGA
AGTTTATTTTGTATGGCATCATGACCTGGTGCTTTGTGGGTTTTGAGGCT
TTTAAGAACATTAGCTACTTCTTGATCTGTTATTTGTTCATCTATTTCGT
GCCTGGTTAATAATGGGTCTAGCATGTGGTAAATTGAATGTCGTTCTCTT
CTGTGGAATTGGGTGTTTTCGAACCAGTGGTCTACAACGTACTTATGTCT
TCTATCATTTGATAGATTGGgtttaaagatattttcttgTCTTTCCTTAA
AGGCATCTGCAATATCTtgcttgtttttaattttggaacCGTCGTCTTTA
GTGAAAGTTTGTTCTTTGTGTTGGGTGTTTACTTTCTCACCGTCTAAAAT
GGTTTTGATATAACTCCATGTCTTTTTGGTTGTTTCCCTTTCATTCATCc
tctttttaattaaattaaatctCTTATCGTTGCTcttttggatttcattt
ttgatttgccTGTTTAATTCTGTTTTCCTGTTTCTGAGaaagttgttgtt
tttgtattttcttagcAGGTTGATGGTActtcttctttctttgattAATT
TTCTGCATTCCATGGACATTCCCTGGTTTTTGTTTGGTATGTTCTTAAAT
GGGATATGCTTATCAATTTCTTGGAGAATATTCAttaatttattagtttt
ttcttctACTTTCTTAGTACCAAAGACTTTCTCACAAGAGAAT Coding sequence (CDS) from alignment at sc0001889:29757..30499 >TCONS_00038590 ID=TCONS_00038590|Name=TCONS_00038590|organism=Clytia hemisphaerica|type=CDS|length=741bp|location=Sequence derived from alignment at sc0001889:29757..30499 (Clytia hemisphaerica)
AAAAAGAGAAGATAGTGGTGATATAAGAATAGGAGAAAGTGTGGAAAGAA
GTTTATTTTGTATGGCATCATGACCTGGTGCTTTGTGGGTTTTGAGGCTT
TTAAGAACATTAGCTACTTCTTGATCTGTTATTTGTTCATCTATTTCGTG
CCTGGTTAATAATGGGTCTAGCATGTGGTAAATTGAATGTCGTTCTCTTC
TGTGGAATTGGGTGTTTTCGAACCAGTGGTCTACAACGTACTTATGTCTT
CTATCATTTGATAGATTGGgtttaaagatattttcttgTCTTTCCTTAAA
GGCATCTGCAATATCTtgcttgtttttaattttggaacCGTCGTCTTTAG
TGAAAGTTTGTTCTTTGTGTTGGGTGTTTACTTTCTCACCGTCTAAAATG
GTTTTGATATAACTCCATGTCTTTTTGGTTGTTTCCCTTTCATTCATCct
ctttttaattaaattaaatctCTTATCGTTGCTcttttggatttcatttt
tgatttgccTGTTTAATTCTGTTTTCCTGTTTCTGAGaaagttgttgttt
ttgtattttcttagcAGGTTGATGGTActtcttctttctttgattAATTT
TCTGCATTCCATGGACATTCCCTGGTTTTTGTTTGGTATGTTCTTAAATG
GGATATGCTTATCAATTTCTTGGAGAATATTCAttaatttattagttttt
tcttctACTTTCTTAGTACCAAAGACTTTCTCACAAGAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038590-exon-sc0001889-1491911889:29757..30499 | TCONS_00038590-exon-sc0001889-1491911889:29757..30499 | Clytia hemisphaerica | exon |
| TCONS_00038590-exon-sc0001889-1510915933:29757..30499 | TCONS_00038590-exon-sc0001889-1510915933:29757..30499 | Clytia hemisphaerica | exon |
| TCONS_00038590-exon-sc0001889-1575043694:29757..30499 | TCONS_00038590-exon-sc0001889-1575043694:29757..30499 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001889 | supercontig | sc0001889:29757..30499 . |
Blast
The following BLAST results are available for this feature:
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