TCONS_00038588 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038588
Unique NameTCONS_00038588
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038588 ID=TCONS_00038588|Name=TCONS_00038588|organism=Clytia hemisphaerica|type=transcript|length=122bp
NNATTAAATTTTAATCAGTAATTCCACAAGTTCAGTAGGCTGGGTACAGA
AACTTAAGTAAAATAACTAAAATCCCCAATGGGTAAAGGTAGTTAAAGGA
ACTACAACACCCCTAAACACCA
Run BLAST on NCBI

transcript from alignment at sc0001889:27096..27217

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038588 ID=TCONS_00038588|Name=TCONS_00038588|organism=Clytia hemisphaerica|type=transcript|length=122bp|location=Sequence derived from alignment at sc0001889:27096..27217 (Clytia hemisphaerica)
TGGTGTTTAGGGGTGTTGTAGTTCCTTTAACTACCTTTACCCATTGGGGA
TTTTAGTTATTTTACTTAAGTTTCTGTACCCAGCCTACTGAACTTGTGGA
ATTACTGATTAAAATTTAATNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023156XLOC_023156Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038588-exon-sc0001889-1491911889:27096..27217TCONS_00038588-exon-sc0001889-1491911889:27096..27217Clytia hemisphaericaexon
TCONS_00038588-exon-sc0001889-1510915933:27096..27217TCONS_00038588-exon-sc0001889-1510915933:27096..27217Clytia hemisphaericaexon
TCONS_00038588-exon-sc0001889-1575043694:27096..27217TCONS_00038588-exon-sc0001889-1575043694:27096..27217Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001889supercontigsc0001889:27096..27217 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038588 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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