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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038586 ID=TCONS_00038586|Name=TCONS_00038586|organism=Clytia hemisphaerica|type=transcript|length=589bp
tttGTCCATCATGATACAGCATGACCCATGGCCTGCAAAATACAACAGCA
GCAGAAGCATATGATAGGCTATCTAGTgaccaacaaagacaaaattgttg
aattgattGCATATGATACTGAACTTGTCAAATAGTTCCGATATCAAAGA
GatgaatgtgatttttgttatcaaaattatgaatcgGTCAATGATATTGA
TAATTTGACGTGCTTCTTCCCAAACTCAGAGCTCAAACACCAAACGACAT
TTCTTGAACTAACTTGGgaatatgttttaaattcatttttgatggattat
aTTCCTGTTCCGCTATCatcatgaatatcatgaatacacaAATTAAAGAA
ACCCAAGCTATGATTTAAAATAAGTACCAAGAATTCATTTGCTTCACtga
gaaatgtttttcattttttttggaattattgtgaattattttatgttttg
gctGGTGTCTCTTGGAATTTTAAATGAAAGTGACATAAGGAGAAATGAAT
GTAGAGGCATTATATTACTGTTTTTctagtttttacattttatttcatat
ttgattttgttgaaaaatgtccaTAAGCTTCATTAAAGA Run BLAST on NCBI transcript from alignment at sc0001889:33729..34593- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038586 ID=TCONS_00038586|Name=TCONS_00038586|organism=Clytia hemisphaerica|type=transcript|length=865bp|location=Sequence derived from alignment at sc0001889:33729..34593- (Clytia hemisphaerica)
TTTGTCCATCATGATACAGCATGACCCATGGCCTGCAAAATACAACAGCA
GCAGAAGCATATGATAGGCTATCTAGTGACCAACAAAGACAAAATTGTTG
AATTGATTGCATATGATACTGAACTTGTCAAATAGTTCCGATATCAAAGA
GATGAATGTGATTTTTGTTATCAAAATTATGAATCGGTCAATGATATTGA
TAATTTGACGTGCTTCTTCCCAAACTCAGAGCTCAAACACCAAACGACAT
TTCTTGAACTAACTTGGGAATATGTTTTAAATTCATTTTTGATGGATTAT
ATTCCTGTTCCGCTATCATCCTGACATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATGATATTCATGACGTAATCTTTTATACGGAAGCACCC
GAGATAACCCGAAACTAGTGGCAAAATAACAAAAGACTAGTGGCAAATTT
TGCCACCAGTTCCGGATCATTTTGTGTCCGTATAAAAGATTACATCATGA
ATATCATGAATACACAAATTAAAGAAACCCAAGCTATGATTTAAAATAAG
TACCAAGAATTCATTTGCTTCACTGAGAAATGTTTTTCATTTTTTTTGGA
ATTATTGTGAATTATTTTATGTTTTGGCTGGTGTCTCTTGGAATTTTAAA
TGAAAGTGACATAAGGAGAAATGAATGTAGAGGCATTATATTACTGTTTT
TCTAGTTTTTACATTTTATTTCATATTTGATTTTGTTGAAAAATGTCCAT
AAGCTTCATTAAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038586-exon-sc0001889-1575043694:34277..34593 | TCONS_00038586-exon-sc0001889-1575043694:34277..34593 | Clytia hemisphaerica | exon |
| TCONS_00038586-exon-sc0001889-1575043694:33729..34000 | TCONS_00038586-exon-sc0001889-1575043694:33729..34000 | Clytia hemisphaerica | exon |
| TCONS_00038586-exon-sc0001889-1510915933:34277..34593 | TCONS_00038586-exon-sc0001889-1510915933:34277..34593 | Clytia hemisphaerica | exon |
| TCONS_00038586-exon-sc0001889-1510915933:33729..34000 | TCONS_00038586-exon-sc0001889-1510915933:33729..34000 | Clytia hemisphaerica | exon |
| TCONS_00038586-exon-sc0001889-1491911889:34277..34593 | TCONS_00038586-exon-sc0001889-1491911889:34277..34593 | Clytia hemisphaerica | exon |
| TCONS_00038586-exon-sc0001889-1491911889:33729..34000 | TCONS_00038586-exon-sc0001889-1491911889:33729..34000 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001889 | supercontig | sc0001889:33729..34593 - |
Blast
The following BLAST results are available for this feature:
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