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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038557 ID=TCONS_00038557|Name=TCONS_00038557|organism=Clytia hemisphaerica|type=transcript|length=353bp
GACTTTagaactgaatttttttaattcactATACCTGCCAAGATGTTAAC
ATGACCAAACGAACAAAAGGAAAGACACGTGGTAGAGGATCACAATGTGC
TGTCAGAATGTTATGGTATGAATCTTTGtttcattCATCCGTGATGAGCG
AATCAACTATTGGTTTTGGATGTCACGGATCTATACCATTCTTTCTGATC
ATGTCTAGCCAGAGATTACTATTAAAATCGTCGAAATAACCAGCATACAG
GACCGAGCCTTAACACTTTGGCATTGACTGCACGACTTTAGCCTCGCCAT
GGTTTGCGCTATAGAGAAAATGTCATATAGAGCTTTGAAGATCGCTGCAG
ATT Run BLAST on NCBI transcript from alignment at sc0001882:25210..26796- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038557 ID=TCONS_00038557|Name=TCONS_00038557|organism=Clytia hemisphaerica|type=transcript|length=1587bp|location=Sequence derived from alignment at sc0001882:25210..26796- (Clytia hemisphaerica)
GACTTTAGAACTGAATTTTTTTAATTCACTATACCTGCCAAGATGTTAAC
ATGACCAAACGAACAAAAGGAAAGACACGTGGTAGAGGATCACAATGTGC
TGTCAGAATGTTATGGTATGAATCTTTGGTATGTTTCGATCTAGTGGTTT
TGCAGTTTTGACAAGTTTAAAAGGCAATTTGAATGTTTCTAAGCTATAGA
TTTTCCTCTATTTAAGGGATCGTTTTTTCTCAAAACAAGGCAATCTTCAA
CTTTAATCTCAGTGTTTTGATTTTCGCTTTTGAATCTTGTTGTTTACTTG
AGAAATCATGTCTTTCTCATACATTAAGAAAAATTGTCTCGTGAAACACT
TATTTTTGAGGTTTCTTTAGGAAATTTGAATTGCTTTGTTTGCGGTAGTT
TTCGAAAGAGTATTCAATTAATTCTCTGTCAGGTAGTAAAAACAAAATTA
GCTTTTAATGGCAAGAGATAGGGTGCGAAATTATATTTATTTTGGTGCTC
ACATACATCAATTGAGTATTTTGTGAAGTTAAGATTTTTTTGTACCGTTA
ATGTCGGTTTGAGAATGTGCACTTCAAGGATGATACGTTTCTGTGTGATT
TTTTTGTTGACCTTGAAAATACAAACTTAATTGTTCCTGATTAACATTAC
ACACAAATGAAACCCATATTATAGGGATTAAAGTAATTAACGATGAAAAT
TGTTTTGTCACTTGGAAAACAATTATCTTTTCGTTTCAAATTTTATTGCA
ACACTCTTTGAAAGAAAATTTATTGCTGAGCAGTGACATCCAGAACAGTT
GTATTTCATTTCTGTTTTTATTTCACATTTTCAAAAAAAGCAAAAGCTAA
CTGAAAAGATAGTATCTTGGAAATAAGAATGTCTGGTCGGGTTTTGGAAT
CTTTAGTTTTGGTTACGATTTTTGATGAATTCTTGCTTGGGTTTTTTTGA
AGTCAATTTAGGGTTTGTAATGGTGTAAACAAGCCAGCATCATTATTTGT
CAAATTATTCGAGATTTGTAAGGATCATTGTGCGTTTGACTTGTTGCGTT
AACGTTTCATGTGTGTAATGAATTTTCAAATTCATTATTATCTACTATGT
TTTTTGTAAGAATACCCAAAGTTTTTTAGGCCTTCGGATGTTCTTAACTT
TTAGATTTTCAACCCTGAAAATGTTCTCAACATGGTCTTATTTTCACCAA
TGTGGGAGTGTTTTTGTACATGTTCCCAAGATATATTTTGGATCTCGCAA
GGCCTCAAATTGTTCTTACTACTCTTTATGGTTTTTGAAAGTCTAAAACT
TTTTCGAAATGGTTTTTTTTATCTTATACCTTTTCTTATAGATCTTTAAT
CTTATTTTTCAGTTTCATTCATCCGTGATGAGCGAATCAACTATTGGTTT
TGGATGTCACGGATCTATACCATTCTTTCTGATCATGTCTAGCCAGAGAT
TACTATTAAAATCGTCGAAATAACCAGCATACAGGACCGAGCCTTAACAC
TTTGGCATTGACTGCACGACTTTAGCCTCGCCATGGTTTGCGCTATAGAG
AAAATGTCATATAGAGCTTTGAAGATCGCTGCAGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038557-exon-sc0001882-1575043694:26669..26796 | TCONS_00038557-exon-sc0001882-1575043694:26669..26796 | Clytia hemisphaerica | exon |
| TCONS_00038557-exon-sc0001882-1575043694:25210..25434 | TCONS_00038557-exon-sc0001882-1575043694:25210..25434 | Clytia hemisphaerica | exon |
| TCONS_00038557-exon-sc0001882-1510915933:26669..26796 | TCONS_00038557-exon-sc0001882-1510915933:26669..26796 | Clytia hemisphaerica | exon |
| TCONS_00038557-exon-sc0001882-1510915933:25210..25434 | TCONS_00038557-exon-sc0001882-1510915933:25210..25434 | Clytia hemisphaerica | exon |
| TCONS_00038557-exon-sc0001882-1491911889:26669..26796 | TCONS_00038557-exon-sc0001882-1491911889:26669..26796 | Clytia hemisphaerica | exon |
| TCONS_00038557-exon-sc0001882-1491911889:25210..25434 | TCONS_00038557-exon-sc0001882-1491911889:25210..25434 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001882 | supercontig | sc0001882:25210..26796 - |
Blast
The following BLAST results are available for this feature:
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