|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038553 ID=TCONS_00038553|Name=TCONS_00038553|organism=Clytia hemisphaerica|type=transcript|length=558bp
ctgacggaaaaccctttgttgttatgattcgaatgttttctctttcgttc
gaattcgaaaagtaaacatcatgtctggggaaatccctctgattggaatg
tttacttaagaaactcttctaaagaggttttcgcggttttagcctctaca
aaggagagttttagaaaatataaaNTTCTCACGTAACAGAGCTTCGAAGT
TTATTGAATGCGTCATAGAATCTGCTAGAGAATCGAGTGGCATTGAGGAT
TTGTTTTACAACAATGCGATCGAGTCTCTTCACTCTTCTCTCAAATCAAA
GATATCCGAGAAGAAAAAAGTTATCGAATTGATCCCATTTATTGAAAGCC
TCATTAAACGCCAACGATTGGAAGAAGATCGAGCTATCACGAAATCAGGA
GACTGGAGACTTTCACAAGAATACAAATGCTTTGAGATGGACAGCAGGGC
TTGGCATGCCACGAAACAGAACGAAAGAGACTTTTTTGATAATAGTTTGT
ACTTTGTATTTCCATTGATATTTCTATTTCTCCTCTCCCACTTGAACGCT
TTTTTTCC Run BLAST on NCBI transcript from alignment at sc0001880:10093..11199- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038553 ID=TCONS_00038553|Name=TCONS_00038553|organism=Clytia hemisphaerica|type=transcript|length=1107bp|location=Sequence derived from alignment at sc0001880:10093..11199- (Clytia hemisphaerica)
CTGACGGAAAACCCTTTGTTGTTATGATTCGAATGTTTTCTCTTTCGTTC
GAATTCGAAAAGTAAACATCATGTCTGGGGAAATCCCTCTGATTGGAATG
TTTACTTAAGAAACTCTTCTAAAGAGGTTTTCGCGGTTTTAGCCTCTACA
AAGGAGAGTTTTAGAAAATATAAANTTCTCACGTAACAGAGCTTCGAAGT
TTATTGAATGCGTCATAGAATCTGCTAGAGAATCGAGTGGCATTGAGGAT
TTGTTTTACAACAATGCGATCGAGTCTCTTCACTCTTCTCTCAAATCAAA
GATATCCGAGAAGAAAAAAGTTATCGAATTGATCCCATTTATTGAAAGCC
TCATTAAACGCCAACGATTGGAAGAAGATCGAGCTATCACGAAATCAGGA
GACTGGAGACTTTCACAAGAATACAAATGCTTTGAGGTAAATTATTTGTA
ACCAGGGGAAATCGATATTTTGATACGGGTCAAGCTACTCAAAAAAAGTT
TGTGGCGTTTGGAAAAAATAAAAGAGAGGTTAAGCAAATTAACAGAGAAA
AAAATTAATTTTAGTTGAAATTTCACTTCATACCTTTTCTTTTTTATAAG
TGCTCACAAGACGAAACTTAATAAAACCCGACTGAGGTGACATCCCTTTT
TAAAGGAACAGTCGAATCCCCAGGCAAAACCGTTTCAAAGACAGAAATTG
CTTTAAAGCAGTGAAACGCAATGTTTAGAGACTTTTAAGCATAGATGCTT
CAGCATCATAATTTTCCCCAGAAAGATTATGTACTTTTTAACACCACTAC
ATCGCACCTTATTTTAGGTTATCAGTTTTATCTAATTTTCTTGATCTTTT
TTAGTGACACTAAAAAGTGATGTCTTCAAAAACAGTTCAAATTATTTTCC
TATTAGATATATAAGCTTCACTTTGGGTTGAAGTTGCTGGGAAGTCCTGG
TCTAAATTTCAAGATTTTTATGTTTCTGTGTTTAGATGGACAGCAGGGCT
TGGCATGCCACGAAACAGAACGAAAGAGACTTTTTTGATAATAGTTTGTA
CTTTGTATTTCCATTGATATTTCTATTTCTCCTCTCCCACTTGAACGCTT
TTTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038553-exon-sc0001880-1575043694:10764..11199 | TCONS_00038553-exon-sc0001880-1575043694:10764..11199 | Clytia hemisphaerica | exon |
| TCONS_00038553-exon-sc0001880-1575043694:10093..10214 | TCONS_00038553-exon-sc0001880-1575043694:10093..10214 | Clytia hemisphaerica | exon |
| TCONS_00038553-exon-sc0001880-1510915933:10764..11199 | TCONS_00038553-exon-sc0001880-1510915933:10764..11199 | Clytia hemisphaerica | exon |
| TCONS_00038553-exon-sc0001880-1510915933:10093..10214 | TCONS_00038553-exon-sc0001880-1510915933:10093..10214 | Clytia hemisphaerica | exon |
| TCONS_00038553-exon-sc0001880-1491911889:10764..11199 | TCONS_00038553-exon-sc0001880-1491911889:10764..11199 | Clytia hemisphaerica | exon |
| TCONS_00038553-exon-sc0001880-1491911889:10093..10214 | TCONS_00038553-exon-sc0001880-1491911889:10093..10214 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001880 | supercontig | sc0001880:10093..11199 - |
Blast
The following BLAST results are available for this feature:
|
