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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038551 ID=TCONS_00038551|Name=TCONS_00038551|organism=Clytia hemisphaerica|type=transcript|length=767bp
gcccgaagggctagaagtcaatctctttggtaggatttgaagccaacaaa
taaccaaaaaatatcaatcgtaaacaaaggaattgttagattcaatctgt
cgtcaaaaatacggcgcattttttaaggcttcactttttcttgcctgaga
aaggttagagattgaactctagcccttcgggctttcaACTCAATGATTGT
AGAGTTCATCAACGATCACGAGAAGACCAAAGAGAAATAATCAGGAGATT
TCAGTGCAACCAGAAGTAGACAACATAAGAACAGAGTCGGATGAGGAAAA
CCAATTTATTCCAATCAGAATCGATAGAGTTTTACTCAGGATTTGTACGA
GTTGAATATTGAGGCTAAAGTTCTTTTGGAGGCCAACAATAAAGATAAAC
TGGCATCAGTATTAGACAAGATGGAGAAGGAATTGTTGAAGCGCCAGAAA
ATCATTTGTTTGGCTGATCGCTCGGTAGCTGGTTGGGATTCTGTCCAAGA
ATATTTGCCCAATGATTTGTTCGAGGATGGAGATGATGATAGGTGGAGGA
AAGCTGAGGGTAGAGCCATCTCAAGTTTGAAACGAAAGCACCAACAGGAC
CCTTCCAACAATGTGGTCCCAAACAAGAAATTCATGTCCCCCCAGTATAA
CCATGCAGTACAGAATTATCAGTCTAGACCACAGCTTCCAATACAACNAT
CAGTCTAGACAACAGCTTCCAATACAACACGTGGTTCCGCAACAGCAGCA
AGTGTTTATACCTCTAC Run BLAST on NCBI transcript from alignment at sc0001879:13323..14351+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038551 ID=TCONS_00038551|Name=TCONS_00038551|organism=Clytia hemisphaerica|type=transcript|length=1029bp|location=Sequence derived from alignment at sc0001879:13323..14351+ (Clytia hemisphaerica)
gcccgaagggctagaagtcaatctctttggtaggatttgaagccaacaaa
taaccaaaaaatatcaatcgtaaacaaaggaattgttagattcaatctgt
cgtcaaaaatacggcgcattttttaaggcttcactttttcttgcctgaga
aaggttagagattgaactctagcccttcgggctttcaACTCAATGATTGT
AGAGTTCATCAACGATCACGAGAAGACCAAAGAGAAATAATCAGGAGATT
TCAGTGCAACCAGAAGTAGACAACATAAGAACAGAGTCGGATGAGGAAAA
CCAATTTATTCCAATCAGAATCGATAGAGGTAATCGCCAATTTAGACCTA
TTGGAGAAGAGGAGGAACAGCAGGAGGATTTTCAAGGCCAGCAGGGTGAT
CCACGACAGATACAAAATAATTTCGATCCTATTGCCTTTCAGGATAACCT
TATGAACTTTTTACAACGAAGGATCGATCAATCAGACGAAAAAAGGGAGA
AGGATAATGTATTTATTAAGTCTCAAATGAAAACTATTCAAAATAAAAGC
TCTCGTGATTTTAAATCAATATCTAATAAATTACAATATAGTTTTACTCA
GGATTTGTACGAGTTGAATATTGAGGCTAAAGTTCTTTTGGAGGCCAACA
ATAAAGATAAACTGGCATCAGTATTAGACAAGATGGAGAAGGAATTGTTG
AAGCGCCAGAAAATCATTTGTTTGGCTGATCGCTCGGTAGCTGGTTGGGA
TTCTGTCCAAGAATATTTGCCCAATGATTTGTTCGAGGATGGAGATGATG
ATAGGTGGAGGAAAGCTGAGGGTAGAGCCATCTCAAGTTTGAAACGAAAG
CACCAACAGGACCCTTCCAACAATGTGGTCCCAAACAAGAAATTCATGTC
CCCCCAGTATAACCATGCAGTACAGAATTATCAGTCTAGACCACAGCTTC
CAATACAACNATCAGTCTAGACAACAGCTTCCAATACAACACGTGGTTCC
GCAACAGCAGCAAGTGTTTATACCTCTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038551-exon-sc0001879-1491911889:13323..13651 | TCONS_00038551-exon-sc0001879-1491911889:13323..13651 | Clytia hemisphaerica | exon |
| TCONS_00038551-exon-sc0001879-1510915933:13323..13651 | TCONS_00038551-exon-sc0001879-1510915933:13323..13651 | Clytia hemisphaerica | exon |
| TCONS_00038551-exon-sc0001879-1575043694:13323..13651 | TCONS_00038551-exon-sc0001879-1575043694:13323..13651 | Clytia hemisphaerica | exon |
| TCONS_00038551-exon-sc0001879-1491911889:13914..14351 | TCONS_00038551-exon-sc0001879-1491911889:13914..14351 | Clytia hemisphaerica | exon |
| TCONS_00038551-exon-sc0001879-1510915933:13914..14351 | TCONS_00038551-exon-sc0001879-1510915933:13914..14351 | Clytia hemisphaerica | exon |
| TCONS_00038551-exon-sc0001879-1575043694:13914..14351 | TCONS_00038551-exon-sc0001879-1575043694:13914..14351 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001879 | supercontig | sc0001879:13323..14351 + |
Blast
The following BLAST results are available for this feature:
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