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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038496 ID=TCONS_00038496|Name=TCONS_00038496|organism=Clytia hemisphaerica|type=transcript|length=1558bp
GGTTAATTTGACAATTTATAGACTCTTGTTAACCTCAAAATATAGAGACC
CTTATTgaattatcggggaaaaaattgtTAGGGAGTCATCAAAAAGGCTT
CAAATATCAAGCTTGTCTAAAAAAGGTTAGATATTTCCCACAAGAAAGGT
GTAATTCATGAGGTTAAAAAAATGGTAACAAGTAACCTCACATTCTTAAC
CATATCTTCTGCCAGCATGTGTAATAAGTTATAGgacaaaaataaaatga
tactAGAAGCTTAGATCGATAGGGTTTTTATGAAATCGACAATCTTTGCT
CTAATGTAGGGTTAAAAATTGAGGTTAAAATTAAAACTCTATGTTAAGGA
ATGTGAGAAATTTGCTTTTCTAATTGATCTAAATAGTTCTATTAAAGCTA
AAGgaacaaaataactttttaaaagcTTTCATAAAAATAACTAAGCTAAA
AACAATATAAACTAGACCAAAAAGGTTCTTAAAATGAGGTTAAATAACCT
GAAAAAGTAGGATGTTTTAACTCATTTCAAATAAGCAAAACCTTCATTTC
TGGCTAGAAATGCTATGCAcaggttaaaatagaaattgtcAGAATGAAGA
ACAAATTGAAATAAACCAATGGAAGAAAGGGTTAGCTATTTGAGGTTAAC
ACTTATTGAAATCAACACTGAGCTAGAAATGCTATTCATCTAAGGTTCAA
CTTCGAAGCCTAGTTGATGCAACCTAagaatctaaagaaaatttatttat
taacAGATATTAACCTCATTTTTTCTACCTTACCTTGTTCCTCAACCATT
AAATAATGGATCCCACTATTTTTATCACACAATTTTCCCTTTCTATGTAG
GTTAGCTGAAAGCTTAAAATTAACCCCTTTCTCAGGTACTTGTCTCTCAA
ATTTAATATACCAGTTAACCTCACTTTTTATACCAAAGTATAATTTTAAT
GTTTAGTTGTTTTTAATAATAGGCTACTGTTTGTCTGAAATCCAAAATTA
GACTGAAATATCATTGTCACAAACTGGATGTTTTTCTGAAATAACCTCAA
ACTTTACACCCTAGTTGAAATATTAACTTCGTTTTCCCTACCTTACTTTG
TTGCCCAATCATTTATTTTGCTTTAACCTCacattttataccaattttag
CTTATCTTTAAAGGACCATTAGCTTAACCTCAGAGCCAGTTAACCTCATA
TTCTTAACCCTACTTTGACCaataatctatatattaatacgcttaaacgt
gtgtgtttacaaagctttgtaaaagtttttcgaaaatctaacaaagatct
acaaagcctcctcttcatggcgtcgaaccatcatctttttgaaccttaag
cagatttcctaccactagactaacttttagaccccaagatactattttcc
ATTCATCAAGTTTGGAGCTTGACCTTCTTCCCATTTTTCgttgtcatttt
aaagaattcttattgAGATNtaaaagtaaacaatagattttgatgatata
ccacttgggaataccttgctaacaacgtcaaaactttgacaaaagtctct
gttgttct Run BLAST on NCBI transcript from alignment at sc0001866:7327..8884 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038496 ID=TCONS_00038496|Name=TCONS_00038496|organism=Clytia hemisphaerica|type=transcript|length=1558bp|location=Sequence derived from alignment at sc0001866:7327..8884 (Clytia hemisphaerica)
agaacaacagagacttttgtcaaagttttgacgttgttagcaaggtattc
ccaagtggtatatcatcaaaatctattgtttacttttaNATCTcaataag
aattctttaaaatgacaacGAAAAATGGGAAGAAGGTCAAGCTCCAAACT
TGATGAATggaaaatagtatcttggggtctaaaagttagtctagtggtag
gaaatctgcttaaggttcaaaaagatgatggttcgacgccatgaagagga
ggctttgtagatctttgttagattttcgaaaaacttttacaaagctttgt
aaacacacacgtttaagcgtattaatatatagattattGGTCAAAGTAGG
GTTAAGAATATGAGGTTAACTGGCTCTGAGGTTAAGCTAATGGTCCTTTA
AAGATAAGctaaaattggtataaaatgtGAGGTTAAAGCAAAATAAATGA
TTGGGCAACAAAGTAAGGTAGGGAAAACGAAGTTAATATTTCAACTAGGG
TGTAAAGTTTGAGGTTATTTCAGAAAAACATCCAGTTTGTGACAATGATA
TTTCAGTCTAATTTTGGATTTCAGACAAACAGTAGCCTATTATTAAAAAC
AACTAAACATTAAAATTATACTTTGGTATAAAAAGTGAGGTTAACTGGTA
TATTAAATTTGAGAGACAAGTACCTGAGAAAGGGGTTAATTTTAAGCTTT
CAGCTAACCTACATAGAAAGGGAAAATTGTGTGATAAAAATAGTGGGATC
CATTATTTAATGGTTGAGGAACAAGGTAAGGTAGAAAAAATGAGGTTAAT
ATCTgttaataaataaattttctttagattctTAGGTTGCATCAACTAGG
CTTCGAAGTTGAACCTTAGATGAATAGCATTTCTAGCTCAGTGTTGATTT
CAATAAGTGTTAACCTCAAATAGCTAACCCTTTCTTCCATTGGTTTATTT
CAATTTGTTCTTCATTCTgacaatttctattttaacctgTGCATAGCATT
TCTAGCCAGAAATGAAGGTTTTGCTTATTTGAAATGAGTTAAAACATCCT
ACTTTTTCAGGTTATTTAACCTCATTTTAAGAACCTTTTTGGTCTAGTTT
ATATTGTTTTTAGCTTAGTTATTTTTATGAAAgcttttaaaaagttattt
tgttcCTTTAGCTTTAATAGAACTATTTAGATCAATTAGAAAAGCAAATT
TCTCACATTCCTTAACATAGAGTTTTAATTTTAACCTCAATTTTTAACCC
TACATTAGAGCAAAGATTGTCGATTTCATAAAAACCCTATCGATCTAAGC
TTCTagtatcattttatttttgtcCTATAACTTATTACACATGCTGGCAG
AAGATATGGTTAAGAATGTGAGGTTACTTGTTACCATTTTTTTAACCTCA
TGAATTACACCTTTCTTGTGGGAAATATCTAACCTTTTTTAGACAAGCTT
GATATTTGAAGCCTTTTTGATGACTCCCTAacaattttttccccgataat
tcAATAAGGGTCTCTATATTTTGAGGTTAACAAGAGTCTATAAATTGTCA
AATTAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038496-exon-sc0001866-1491911889:7327..8884 | TCONS_00038496-exon-sc0001866-1491911889:7327..8884 | Clytia hemisphaerica | exon |
| TCONS_00038496-exon-sc0001866-1510915933:7327..8884 | TCONS_00038496-exon-sc0001866-1510915933:7327..8884 | Clytia hemisphaerica | exon |
| TCONS_00038496-exon-sc0001866-1575043694:7327..8884 | TCONS_00038496-exon-sc0001866-1575043694:7327..8884 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001866 | supercontig | sc0001866:7327..8884 . |
Blast
The following BLAST results are available for this feature:
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