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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038480 ID=TCONS_00038480|Name=TCONS_00038480|organism=Clytia hemisphaerica|type=transcript|length=1195bp
TGATTTTATCGCCAAATTTTCTAGTGGGTtaggggtcccaccgggtctgt
gggAGACAACAAAATTGCAGATAAATCTGATTTTCCGAATTTGCAAAGTG
TTaggaaaaatcaggaaaatatttttctggaacATATTTGAAAGTAAAAC
TAGCCCATTTTGTTTCTGTCCTTTTCTCTGGAACTGGTGAACtggttttt
cctgatttttacaATGATGCATAGTGATGACATTCAAAATTGGAGAGAGC
CGAATTAGTAACTTATTAGACAGGTAGAATTAGGTCATAAACAACCAAAA
CCGGGACAAAAATGGCGTacagatgaaattttgcacatagCTCCAGGAAT
ATAACGAGATATAACgattttaaaatcgaaaaaaagtgctgactcagcaa
aaataagCGTTATAAACGATTTTTATAAACGTTATATCTCGCCAACGGCT
GATCTAAACATATTAAAccatatattttctgaaagcccgtGATCAGGGCT
ACATGGTGAGCTGATCGTTGTTCCAATTTATTGCTCTTAGTAAAAATGCt
aacgtcatcaaaatcgtcattttttggactttaaagGTCATATCTTGGGA
CCAagtggtccaaatttcaaaagtgaccccCTTTTTTTATCTACTCATCA
AGAGGGTGTTCCCTgtctagttatttttgacatttgaaaaccattaaaaa
tcagttatcaagggtcccccttaattaattgtagaaaaaagtCCTATGgt
cgccattatggatttgagggtgttcccatcttcTTGGGGGTAGGGCTTTT
Ctttggtgattcctgacattttcctggacctctgtgcaaaatttcatctc
tacatcatttttgtctgggtagttatgcaattctacctgactatatgTTC
ACTGTATTTCGCAAGGAAAATGACGTATGTtcactgtatttcccaaggaa
aatgaagtaaAAGGTATATATTCTAGAAAAAAGAGTTGATTTTCTAAACA
GGGACGTTatacttcattttccttgagaaatacagtgGACATACTTATTT
TCTATGGAAAATACAGTGAACACGCTAAGTTTCAGGCTATAATTTTTTGG
GTGCTGGCAGGCATTATGGATGGAAAGATCCATATCAAATTTCAAGCTCC
TACCTTTCCTGGTTAGCTCACAAGTCGGCTATTACAAGAATGCTA Run BLAST on NCBI transcript from alignment at sc0001860:17907..19101 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038480 ID=TCONS_00038480|Name=TCONS_00038480|organism=Clytia hemisphaerica|type=transcript|length=1195bp|location=Sequence derived from alignment at sc0001860:17907..19101 (Clytia hemisphaerica)
TAGCATTCTTGTAATAGCCGACTTGTGAGCTAACCAGGAAAGGTAGGAGC
TTGAAATTTGATATGGATCTTTCCATCCATAATGCCTGCCAGCACCCAAA
AAATTATAGCCTGAAACTTAGCGTGTTCACTGTATTTTCCATAGAAAATA
AGTATGTCcactgtatttctcaaggaaaatgaagtatAACGTCCCTGTTT
AGAAAATCAACTCTTTTTTCTAGAATATATACCTTttacttcattttcct
tgggaaatacagtgaACATACGTCATTTTCCTTGCGAAATACAGTGAAca
tatagtcaggtagaattgcataactacccagacaaaaatgatgtagagat
gaaattttgcacagaggtccaggaaaatgtcaggaatcaccaaaGAAAAG
CCCTACCCCCAAgaagatgggaacaccctcaaatccataatggcgacCAT
AGGacttttttctacaattaattaagggggacccttgataactgattttt
aatggttttcaaatgtcaaaaataactagacAGGGAACACCCTCTTGATG
AGTAGATAAAAAAAGggggtcacttttgaaatttggaccactTGGTCCCA
AGATATGACctttaaagtccaaaaaatgacgattttgatgacgttaGCAT
TTTTACTAAGAGCAATAAATTGGAACAACGATCAGCTCACCATGTAGCCC
TGATCacgggctttcagaaaatatatggTTTAATATGTTTAGATCAGCCG
TTGGCGAGATATAACGTTTATAAAAATCGTTTATAACGcttatttttgct
gagtcagcactttttttcgattttaaaatcGTTATATCTCGTTATATTCC
TGGAGctatgtgcaaaatttcatctgtACGCCATTTTTGTCCCGGTTTTG
GTTGTTTATGACCTAATTCTACCTGTCTAATAAGTTACTAATTCGGCTCT
CTCCAATTTTGAATGTCATCACTATGCATCATtgtaaaaatcaggaaaaa
ccaGTTCACCAGTTCCAGAGAAAAGGACAGAAACAAAATGGGCTAGTTTT
ACTTTCAAATATgttccagaaaaatattttcctgatttttcctAACACTT
TGCAAATTCGGAAAATCAGATTTATCTGCAATTTTGTTGTCTcccacaga
cccggtgggacccctaACCCACTAGAAAATTTGGCGATAAAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038480-exon-sc0001860-1491911889:17907..19101 | TCONS_00038480-exon-sc0001860-1491911889:17907..19101 | Clytia hemisphaerica | exon |
| TCONS_00038480-exon-sc0001860-1510915933:17907..19101 | TCONS_00038480-exon-sc0001860-1510915933:17907..19101 | Clytia hemisphaerica | exon |
| TCONS_00038480-exon-sc0001860-1575043694:17907..19101 | TCONS_00038480-exon-sc0001860-1575043694:17907..19101 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001860 | supercontig | sc0001860:17907..19101 . |
Blast
The following BLAST results are available for this feature:
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