TCONS_00038466 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038466
Unique NameTCONS_00038466
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038466 ID=TCONS_00038466|Name=TCONS_00038466|organism=Clytia hemisphaerica|type=transcript|length=186bp
ccttgttttatcaaaagataatgaatatgtcataaacgtctgcactcccc
cgtaaattttgcagggtaagTCGCTACGCCTATGTTACAAGGCTGTTACT
TACATGTGTGCATATCTGTCGAAAACTGAAGATGAAGTGTCTCATGCTAT
GAACCAAGCTGTTCAAGAAGCATTCGAAAACGATTT
Run BLAST on NCBI

transcript from alignment at sc0001858:7342..7527

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038466 ID=TCONS_00038466|Name=TCONS_00038466|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at sc0001858:7342..7527 (Clytia hemisphaerica)
AAATCGTTTTCGAATGCTTCTTGAACAGCTTGGTTCATAGCATGAGACAC
TTCATCTTCAGTTTTCGACAGATATGCACACATGTAAGTAACAGCCTTGT
AACATAGGCGTAGCGActtaccctgcaaaatttacgggggagtgcagacg
tttatgacatattcattatcttttgataaaacaagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023055XLOC_023055Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038466-exon-sc0001858-1491911889:7342..7527TCONS_00038466-exon-sc0001858-1491911889:7342..7527Clytia hemisphaericaexon
TCONS_00038466-exon-sc0001858-1510915933:7342..7527TCONS_00038466-exon-sc0001858-1510915933:7342..7527Clytia hemisphaericaexon
TCONS_00038466-exon-sc0001858-1575043694:7342..7527TCONS_00038466-exon-sc0001858-1575043694:7342..7527Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001858supercontigsc0001858:7342..7527 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038466 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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