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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038397 ID=TCONS_00038397|Name=TCONS_00038397|organism=Clytia hemisphaerica|type=transcript|length=186bp
TGTTCAAGGCCAGaattcaAGACCACCCTTCACTCTGTGTGAGGGGTTAT
ACTCGGCACTATCAGCTTAATCGGCACTATCAGCTTAATCGGCACTATCA
GCTTAATCAGCATCTATCACTATCAAAATTTACTGAACTAAACTTACTCA
GCTCACTgaatatttgaaataaatatacaaaaaaat Run BLAST on NCBI transcript from alignment at sc0001842:35584..36684+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038397 ID=TCONS_00038397|Name=TCONS_00038397|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at sc0001842:35584..36684+ (Clytia hemisphaerica)
TGTTCAAGGCCAGGTTAGTACTTACTGGGATGATTTTAATTGTCTTAtaa
aaatagtattattttgctataaaaagaaAGCAGCTGAATAACTTCTTTCC
TCTAAGACTATTATAAGTCTTAAATTAACCTTTTTTAAGAGTATAAATTA
ATGcgaatgaccaaaatatttaaCCATTaagttttgcggaatttaataaT
GCGTATTAGGCCAAATTTGCATTAATTAGCCCCGCATTAATTTATACTCT
TCTACAATAAGGAGTGGCAGATTATTGCAGATGATGATTTATGTCCACCc
actacaaatttttttctagaataaTCTAGCAGCCCCAGCggacatcaaaa
aattttctggttccCAACTTTCGTCActccaacggattagaataggtgga
ttaacttctctcgttgctcccaagagagatccattgtcttctcattgtta
caagaaaaatctgtaaatgactctgcgNNAAAATGTACCACGTGATACGT
AATgaccaatgaaaatgttgaaagtaatgattttttacaacttttttaca
acttatcaagttttaattgctagcaaactcgtaaaaaagtttgataacct
aacgaggagtgttttctatgagttcttaatccacctattctaatccgttg
gtcactcttttctcaaaaaaaccAGTTAGAAAGTTTGTAAAAAGACCCGG
GAaatcaaaattcattaaaaatgaaggtcCCGCTCCTTAAGAGCTTCAGC
GTGGGTGGCTGCCAATATGCCATTGGAATATCTGATAAGTCCTTTTTGCC
GACCACCCGCCCGCCTGGTACACTTATAAGACACACTGCGACaggaacaa
aagaaattttcgatGTCCACCCTCGCCTTTATGTCGTACAATATACAtct
tactaattttttttttttttttttacagaattcaAGACCACCCTTCACTC
TGTGTGAGGGGTTATACTCGGCACTATCAGCTTAATCGGCACTATCAGCT
TAATCGGCACTATCAGCTTAATCAGCATCTATCACTATCAAAATTTACTG
AACTAAACTTACTCAGCTCACTgaatatttgaaataaatatacaaaaaaa
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038397-exon-sc0001842-1491911889:35584..35596 | TCONS_00038397-exon-sc0001842-1491911889:35584..35596 | Clytia hemisphaerica | exon |
| TCONS_00038397-exon-sc0001842-1510915933:35584..35596 | TCONS_00038397-exon-sc0001842-1510915933:35584..35596 | Clytia hemisphaerica | exon |
| TCONS_00038397-exon-sc0001842-1575043694:35584..35596 | TCONS_00038397-exon-sc0001842-1575043694:35584..35596 | Clytia hemisphaerica | exon |
| TCONS_00038397-exon-sc0001842-1491911889:36512..36684 | TCONS_00038397-exon-sc0001842-1491911889:36512..36684 | Clytia hemisphaerica | exon |
| TCONS_00038397-exon-sc0001842-1510915933:36512..36684 | TCONS_00038397-exon-sc0001842-1510915933:36512..36684 | Clytia hemisphaerica | exon |
| TCONS_00038397-exon-sc0001842-1575043694:36512..36684 | TCONS_00038397-exon-sc0001842-1575043694:36512..36684 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001842 | supercontig | sc0001842:35584..36684 + |
Blast
The following BLAST results are available for this feature:
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